EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000006048 (Gene tree)
Gene ID: 101997267
Gene Symbol: Lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 82149 bases
Position: chr16:7666535-7748683
Accession: 101997267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006428	PPR	PF01535.20	5.9e-31	1	5
ENSMOCP00000006428	PPR	PF01535.20	5.9e-31	2	5
ENSMOCP00000006428	PPR	PF01535.20	5.9e-31	3	5
ENSMOCP00000006428	PPR	PF01535.20	5.9e-31	4	5
ENSMOCP00000006428	PPR	PF01535.20	5.9e-31	5	5
ENSMOCP00000006424	PPR	PF01535.20	6.8e-31	1	5
ENSMOCP00000006424	PPR	PF01535.20	6.8e-31	2	5
ENSMOCP00000006424	PPR	PF01535.20	6.8e-31	3	5
ENSMOCP00000006424	PPR	PF01535.20	6.8e-31	4	5
ENSMOCP00000006424	PPR	PF01535.20	6.8e-31	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000007884	-	4253	XM_005354688	ENSMOCP00000006424	1392 (aa)	XP_005354745	UPI00038C467E
ENSMOCT00000007890	-	4134	-	ENSMOCP00000006428	1377 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000006048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006048	Lrpprc	99	51.862	ENSAPOG00000016610	lrpprc	99	51.862	Acanthochromis_polyacanthus
ENSMOCG00000006048	Lrpprc	98	79.619	ENSAMEG00000005852	LRPPRC	100	80.024	Ailuropoda_melanoleuca
ENSMOCG00000006048	Lrpprc	99	49.322	ENSACIG00000009604	lrpprc	99	49.322	Amphilophus_citrinellus
ENSMOCG00000006048	Lrpprc	99	50.630	ENSAOCG00000005886	lrpprc	99	50.700	Amphiprion_ocellaris
ENSMOCG00000006048	Lrpprc	98	52.857	ENSAPEG00000002937	lrpprc	99	52.857	Amphiprion_percula
ENSMOCG00000006048	Lrpprc	93	56.426	ENSATEG00000010555	lrpprc	98	56.426	Anabas_testudineus
ENSMOCG00000006048	Lrpprc	96	62.574	ENSACAG00000029278	LRPPRC	99	61.238	Anolis_carolinensis
ENSMOCG00000006048	Lrpprc	100	78.612	ENSANAG00000027440	LRPPRC	100	78.755	Aotus_nancymaae
ENSMOCG00000006048	Lrpprc	96	50.638	ENSACLG00000023712	lrpprc	92	57.849	Astatotilapia_calliptera
ENSMOCG00000006048	Lrpprc	100	78.317	ENSCJAG00000000794	LRPPRC	100	78.541	Callithrix_jacchus
ENSMOCG00000006048	Lrpprc	99	80.532	ENSCHIG00000020173	LRPPRC	99	80.532	Capra_hircus
ENSMOCG00000006048	Lrpprc	96	62.407	ENSCAPG00000013631	LRPPRC	100	62.407	Cavia_aperea
ENSMOCG00000006048	Lrpprc	87	79.436	ENSCPOG00000000204	LRPPRC	100	79.436	Cavia_porcellus
ENSMOCG00000006048	Lrpprc	100	78.699	ENSCCAG00000031900	LRPPRC	100	78.699	Cebus_capucinus
ENSMOCG00000006048	Lrpprc	100	78.541	ENSCATG00000014187	LRPPRC	99	77.989	Cercocebus_atys
ENSMOCG00000006048	Lrpprc	99	77.810	ENSCLAG00000005203	LRPPRC	99	77.810	Chinchilla_lanigera
ENSMOCG00000006048	Lrpprc	100	78.326	ENSCSAG00000013233	LRPPRC	100	78.326	Chlorocebus_sabaeus
ENSMOCG00000006048	Lrpprc	84	77.333	ENSCHOG00000003631	LRPPRC	84	77.333	Choloepus_hoffmanni
ENSMOCG00000006048	Lrpprc	100	74.662	ENSCANG00000034961	LRPPRC	100	76.293	Colobus_angolensis_palliatus
ENSMOCG00000006048	Lrpprc	100	86.638	ENSCGRG00001016261	Lrpprc	100	86.638	Cricetulus_griseus_chok1gshd
ENSMOCG00000006048	Lrpprc	100	86.638	ENSCGRG00000004072	Lrpprc	100	86.638	Cricetulus_griseus_crigri
ENSMOCG00000006048	Lrpprc	99	41.956	ENSCSEG00000003850	lrpprc	96	49.501	Cynoglossus_semilaevis
ENSMOCG00000006048	Lrpprc	100	51.296	ENSCVAG00000012967	lrpprc	99	51.296	Cyprinodon_variegatus
ENSMOCG00000006048	Lrpprc	99	49.163	ENSDARG00000043970	lrpprc	98	49.163	Danio_rerio
ENSMOCG00000006048	Lrpprc	82	59.301	ENSDNOG00000032336	-	100	59.301	Dasypus_novemcinctus
ENSMOCG00000006048	Lrpprc	100	77.650	ENSDNOG00000012594	-	100	77.650	Dasypus_novemcinctus
ENSMOCG00000006048	Lrpprc	100	81.492	ENSDORG00000012233	Lrpprc	100	81.492	Dipodomys_ordii
ENSMOCG00000006048	Lrpprc	99	77.028	ENSETEG00000006657	LRPPRC	99	77.028	Echinops_telfairi
ENSMOCG00000006048	Lrpprc	87	68.016	ENSEEUG00000012340	LRPPRC	93	68.016	Erinaceus_europaeus
ENSMOCG00000006048	Lrpprc	96	50.563	ENSELUG00000012803	lrpprc	98	50.563	Esox_lucius
ENSMOCG00000006048	Lrpprc	99	81.694	ENSFCAG00000013468	LRPPRC	99	81.694	Felis_catus
ENSMOCG00000006048	Lrpprc	95	56.358	ENSFALG00000012738	LRPPRC	99	56.358	Ficedula_albicollis
ENSMOCG00000006048	Lrpprc	100	76.857	ENSFDAG00000015328	LRPPRC	100	76.857	Fukomys_damarensis
ENSMOCG00000006048	Lrpprc	99	50.599	ENSFHEG00000019604	lrpprc	99	50.599	Fundulus_heteroclitus
ENSMOCG00000006048	Lrpprc	99	48.283	ENSGMOG00000008337	lrpprc	99	48.283	Gadus_morhua
ENSMOCG00000006048	Lrpprc	99	51.058	ENSGAFG00000001455	lrpprc	99	51.058	Gambusia_affinis
ENSMOCG00000006048	Lrpprc	99	50.321	ENSGACG00000010679	lrpprc	99	51.147	Gasterosteus_aculeatus
ENSMOCG00000006048	Lrpprc	99	50.914	ENSHBUG00000000393	lrpprc	97	50.914	Haplochromis_burtoni
ENSMOCG00000006048	Lrpprc	100	78.127	ENSHGLG00000006123	LRPPRC	100	78.127	Heterocephalus_glaber_female
ENSMOCG00000006048	Lrpprc	61	79.017	ENSHGLG00100005960	-	100	79.137	Heterocephalus_glaber_male
ENSMOCG00000006048	Lrpprc	98	49.748	ENSHCOG00000002107	lrpprc	100	49.748	Hippocampus_comes
ENSMOCG00000006048	Lrpprc	98	51.687	ENSIPUG00000009406	lrpprc	98	51.116	Ictalurus_punctatus
ENSMOCG00000006048	Lrpprc	100	83.011	ENSSTOG00000011185	LRPPRC	100	83.011	Ictidomys_tridecemlineatus
ENSMOCG00000006048	Lrpprc	100	83.202	ENSJJAG00000020475	Lrpprc	100	83.202	Jaculus_jaculus
ENSMOCG00000006048	Lrpprc	98	47.911	ENSKMAG00000003287	lrpprc	84	47.911	Kryptolebias_marmoratus
ENSMOCG00000006048	Lrpprc	98	52.485	ENSLBEG00000023225	lrpprc	96	56.102	Labrus_bergylta
ENSMOCG00000006048	Lrpprc	100	61.162	ENSLACG00000014030	LRPPRC	99	61.162	Latimeria_chalumnae
ENSMOCG00000006048	Lrpprc	99	57.806	ENSLOCG00000016390	lrpprc	97	57.806	Lepisosteus_oculatus
ENSMOCG00000006048	Lrpprc	99	73.372	ENSLAFG00000008614	LRPPRC	99	73.372	Loxodonta_africana
ENSMOCG00000006048	Lrpprc	100	78.398	ENSMFAG00000041560	LRPPRC	99	77.799	Macaca_fascicularis
ENSMOCG00000006048	Lrpprc	99	76.896	ENSMMUG00000019841	LRPPRC	100	79.786	Macaca_mulatta
ENSMOCG00000006048	Lrpprc	100	78.612	ENSMNEG00000031613	LRPPRC	100	78.612	Macaca_nemestrina
ENSMOCG00000006048	Lrpprc	98	48.098	ENSMAMG00000021835	lrpprc	98	48.610	Mastacembelus_armatus
ENSMOCG00000006048	Lrpprc	99	51.195	ENSMZEG00005027379	lrpprc	99	51.195	Maylandia_zebra
ENSMOCG00000006048	Lrpprc	100	87.356	ENSMAUG00000012118	Lrpprc	100	87.356	Mesocricetus_auratus
ENSMOCG00000006048	Lrpprc	99	80.905	ENSMICG00000010486	LRPPRC	99	80.905	Microcebus_murinus
ENSMOCG00000006048	Lrpprc	95	55.969	ENSMMOG00000007830	lrpprc	99	55.969	Mola_mola
ENSMOCG00000006048	Lrpprc	96	67.780	ENSMODG00000000648	LRPPRC	99	67.780	Monodelphis_domestica
ENSMOCG00000006048	Lrpprc	99	49.295	ENSMALG00000001271	lrpprc	99	49.331	Monopterus_albus
ENSMOCG00000006048	Lrpprc	99	78.868	ENSMPUG00000011800	LRPPRC	99	81.261	Mustela_putorius_furo
ENSMOCG00000006048	Lrpprc	99	81.062	ENSMLUG00000010575	LRPPRC	99	81.062	Myotis_lucifugus
ENSMOCG00000006048	Lrpprc	100	85.345	ENSNGAG00000013069	Lrpprc	100	85.345	Nannospalax_galili
ENSMOCG00000006048	Lrpprc	94	49.502	ENSNBRG00000013202	lrpprc	92	57.576	Neolamprologus_brichardi
ENSMOCG00000006048	Lrpprc	100	77.044	ENSNLEG00000016782	LRPPRC	100	77.044	Nomascus_leucogenys
ENSMOCG00000006048	Lrpprc	93	73.384	ENSOPRG00000016774	LRPPRC	93	73.384	Ochotona_princeps
ENSMOCG00000006048	Lrpprc	100	79.770	ENSODEG00000011211	LRPPRC	100	79.770	Octodon_degus
ENSMOCG00000006048	Lrpprc	99	50.844	ENSONIG00000000917	lrpprc	99	50.745	Oreochromis_niloticus
ENSMOCG00000006048	Lrpprc	74	63.233	ENSOANG00000014670	-	100	63.494	Ornithorhynchus_anatinus
ENSMOCG00000006048	Lrpprc	99	81.192	ENSOCUG00000015046	LRPPRC	96	81.192	Oryctolagus_cuniculus
ENSMOCG00000006048	Lrpprc	99	49.785	ENSORLG00000004605	lrpprc	98	48.792	Oryzias_latipes
ENSMOCG00000006048	Lrpprc	92	52.245	ENSORLG00020012536	lrpprc	99	51.508	Oryzias_latipes_hni
ENSMOCG00000006048	Lrpprc	94	54.326	ENSORLG00015018270	lrpprc	98	54.326	Oryzias_latipes_hsok
ENSMOCG00000006048	Lrpprc	99	78.017	ENSOGAG00000012798	LRPPRC	99	78.017	Otolemur_garnettii
ENSMOCG00000006048	Lrpprc	99	80.775	ENSOARG00000006522	LRPPRC	99	80.775	Ovis_aries
ENSMOCG00000006048	Lrpprc	100	75.410	ENSPPAG00000040876	LRPPRC	100	75.481	Pan_paniscus
ENSMOCG00000006048	Lrpprc	99	81.407	ENSPPRG00000006578	LRPPRC	99	81.407	Panthera_pardus
ENSMOCG00000006048	Lrpprc	97	82.087	ENSPTIG00000000933	LRPPRC	97	82.087	Panthera_tigris_altaica
ENSMOCG00000006048	Lrpprc	100	77.690	ENSPTRG00000011880	LRPPRC	100	77.690	Pan_troglodytes
ENSMOCG00000006048	Lrpprc	100	78.112	ENSPANG00000020731	LRPPRC	99	77.609	Papio_anubis
ENSMOCG00000006048	Lrpprc	89	57.895	ENSPKIG00000022232	lrpprc	96	57.895	Paramormyrops_kingsleyae
ENSMOCG00000006048	Lrpprc	61	64.843	ENSPSIG00000006830	-	98	64.843	Pelodiscus_sinensis
ENSMOCG00000006048	Lrpprc	66	46.522	ENSPMGG00000016597	lrpprc	96	46.522	Periophthalmus_magnuspinnatus
ENSMOCG00000006048	Lrpprc	94	44.757	ENSPMAG00000002147	lrpprc	99	44.757	Petromyzon_marinus
ENSMOCG00000006048	Lrpprc	99	50.423	ENSPFOG00000011227	lrpprc	99	50.533	Poecilia_formosa
ENSMOCG00000006048	Lrpprc	99	50.141	ENSPLAG00000004018	lrpprc	99	50.141	Poecilia_latipinna
ENSMOCG00000006048	Lrpprc	99	50.494	ENSPMEG00000016425	lrpprc	99	50.494	Poecilia_mexicana
ENSMOCG00000006048	Lrpprc	99	50.710	ENSPREG00000003662	lrpprc	99	50.710	Poecilia_reticulata
ENSMOCG00000006048	Lrpprc	58	77.460	ENSPPYG00000029532	-	100	77.460	Pongo_abelii
ENSMOCG00000006048	Lrpprc	83	73.748	ENSPCAG00000001430	LRPPRC	84	73.748	Procavia_capensis
ENSMOCG00000006048	Lrpprc	99	78.033	ENSPVAG00000002007	LRPPRC	99	78.033	Pteropus_vampyrus
ENSMOCG00000006048	Lrpprc	99	49.070	ENSPNYG00000000756	lrpprc	99	49.070	Pundamilia_nyererei
ENSMOCG00000006048	Lrpprc	99	53.544	ENSPNAG00000002895	lrpprc	99	53.544	Pygocentrus_nattereri
ENSMOCG00000006048	Lrpprc	100	86.997	ENSRNOG00000005877	Lrpprc	100	86.997	Rattus_norvegicus
ENSMOCG00000006048	Lrpprc	100	76.174	ENSRBIG00000031552	LRPPRC	100	76.174	Rhinopithecus_bieti
ENSMOCG00000006048	Lrpprc	100	78.495	ENSSBOG00000011807	LRPPRC	100	78.710	Saimiri_boliviensis_boliviensis
ENSMOCG00000006048	Lrpprc	96	65.776	ENSSHAG00000018725	LRPPRC	99	65.776	Sarcophilus_harrisii
ENSMOCG00000006048	Lrpprc	99	50.382	ENSSFOG00015001042	lrpprc	99	50.382	Scleropages_formosus
ENSMOCG00000006048	Lrpprc	99	51.091	ENSSDUG00000019062	lrpprc	99	51.091	Seriola_dumerili
ENSMOCG00000006048	Lrpprc	99	43.372	ENSSLDG00000023028	lrpprc	99	43.948	Seriola_lalandi_dorsalis
ENSMOCG00000006048	Lrpprc	87	69.110	ENSSARG00000000426	LRPPRC	100	69.110	Sorex_araneus
ENSMOCG00000006048	Lrpprc	99	48.264	ENSSPAG00000000162	lrpprc	99	48.403	Stegastes_partitus
ENSMOCG00000006048	Lrpprc	99	80.631	ENSSSCG00000008452	LRPPRC	99	80.631	Sus_scrofa
ENSMOCG00000006048	Lrpprc	94	56.155	ENSTGUG00000003759	LRPPRC	100	56.155	Taeniopygia_guttata
ENSMOCG00000006048	Lrpprc	99	51.420	ENSTRUG00000008409	lrpprc	96	51.420	Takifugu_rubripes
ENSMOCG00000006048	Lrpprc	99	50.070	ENSTNIG00000007470	lrpprc	99	51.439	Tetraodon_nigroviridis
ENSMOCG00000006048	Lrpprc	99	78.192	ENSTTRG00000006403	LRPPRC	99	78.192	Tursiops_truncatus
ENSMOCG00000006048	Lrpprc	96	75.428	ENSVPAG00000008993	LRPPRC	99	75.428	Vicugna_pacos
ENSMOCG00000006048	Lrpprc	99	59.346	ENSXETG00000009296	lrpprc	99	59.346	Xenopus_tropicalis
ENSMOCG00000006048	Lrpprc	99	48.345	ENSXCOG00000013343	lrpprc	95	53.000	Xiphophorus_couchianus
ENSMOCG00000006048	Lrpprc	99	50.317	ENSXMAG00000018108	lrpprc	99	50.317	Xiphophorus_maculatus