EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000006305 (Gene tree)
Gene ID: 101996893
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Snf2p
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 52088 bases
Position: chr21:5670753-5722840
Accession: 101996893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006648	ResIII	PF04851.15	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000008206	-	2706	XM_013349877	ENSMOCP00000006648	901 (aa)	XP_013205331	UPI00038BBBFB

Gene Model

Click here to download ENSMOCG00000006305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000006305	Chd1l	50	43.388	ENSMOCG00000018583	-	55	43.595
ENSMOCG00000006305	Chd1l	50	30.118	ENSMOCG00000020035	Rad54b	56	30.118
ENSMOCG00000006305	Chd1l	62	41.980	ENSMOCG00000016986	-	54	41.980
ENSMOCG00000006305	Chd1l	53	39.007	ENSMOCG00000019342	Hells	70	39.007
ENSMOCG00000006305	Chd1l	55	31.980	ENSMOCG00000019362	-	65	31.439
ENSMOCG00000006305	Chd1l	62	42.955	ENSMOCG00000009464	Smarca1	55	42.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006305	Chd1l	99	86.667	ENSG00000131778	CHD1L	100	87.380	Homo_sapiens
ENSMOCG00000006305	Chd1l	96	64.815	ENSAPOG00000001539	chd1l	98	65.017	Acanthochromis_polyacanthus
ENSMOCG00000006305	Chd1l	99	85.539	ENSAMEG00000017063	CHD1L	99	85.539	Ailuropoda_melanoleuca
ENSMOCG00000006305	Chd1l	95	66.706	ENSACIG00000001164	chd1l	99	65.446	Amphilophus_citrinellus
ENSMOCG00000006305	Chd1l	98	64.027	ENSAOCG00000014510	chd1l	87	64.640	Amphiprion_ocellaris
ENSMOCG00000006305	Chd1l	97	62.041	ENSAPEG00000017573	chd1l	95	62.615	Amphiprion_percula
ENSMOCG00000006305	Chd1l	96	62.225	ENSAPEG00000017450	chd1l	97	61.461	Amphiprion_percula
ENSMOCG00000006305	Chd1l	98	64.527	ENSATEG00000013058	chd1l	94	64.786	Anabas_testudineus
ENSMOCG00000006305	Chd1l	95	73.068	ENSAPLG00000009976	CHD1L	96	73.020	Anas_platyrhynchos
ENSMOCG00000006305	Chd1l	97	67.297	ENSACAG00000017686	CHD1L	99	66.849	Anolis_carolinensis
ENSMOCG00000006305	Chd1l	97	87.571	ENSANAG00000024347	CHD1L	99	86.142	Aotus_nancymaae
ENSMOCG00000006305	Chd1l	98	64.626	ENSACLG00000019304	chd1l	97	64.480	Astatotilapia_calliptera
ENSMOCG00000006305	Chd1l	99	58.621	ENSAMXG00000012367	chd1l	88	58.621	Astyanax_mexicanus
ENSMOCG00000006305	Chd1l	99	85.301	ENSBTAG00000020831	CHD1L	99	85.301	Bos_taurus
ENSMOCG00000006305	Chd1l	99	86.000	ENSCJAG00000002406	CHD1L	99	86.000	Callithrix_jacchus
ENSMOCG00000006305	Chd1l	99	82.222	ENSCAFG00000010944	CHD1L	99	82.373	Canis_familiaris
ENSMOCG00000006305	Chd1l	99	84.761	ENSCAFG00020020121	CHD1L	99	84.761	Canis_lupus_dingo
ENSMOCG00000006305	Chd1l	99	84.804	ENSCHIG00000013871	CHD1L	99	85.363	Capra_hircus
ENSMOCG00000006305	Chd1l	96	88.051	ENSTSYG00000003005	CHD1L	100	88.051	Carlito_syrichta
ENSMOCG00000006305	Chd1l	98	84.746	ENSCPOG00000009000	CHD1L	100	84.035	Cavia_porcellus
ENSMOCG00000006305	Chd1l	99	83.778	ENSCCAG00000036079	CHD1L	99	83.778	Cebus_capucinus
ENSMOCG00000006305	Chd1l	99	87.000	ENSCATG00000031044	CHD1L	99	87.000	Cercocebus_atys
ENSMOCG00000006305	Chd1l	100	85.128	ENSCLAG00000000880	CHD1L	100	86.127	Chinchilla_lanigera
ENSMOCG00000006305	Chd1l	99	87.111	ENSCSAG00000018386	CHD1L	99	87.111	Chlorocebus_sabaeus
ENSMOCG00000006305	Chd1l	98	74.830	ENSCPBG00000002600	CHD1L	100	73.860	Chrysemys_picta_bellii
ENSMOCG00000006305	Chd1l	99	85.778	ENSCANG00000020239	CHD1L	99	85.778	Colobus_angolensis_palliatus
ENSMOCG00000006305	Chd1l	99	93.230	ENSCGRG00001021624	Chd1l	99	93.230	Cricetulus_griseus_chok1gshd
ENSMOCG00000006305	Chd1l	95	93.132	ENSCGRG00000007554	Chd1l	99	93.132	Cricetulus_griseus_crigri
ENSMOCG00000006305	Chd1l	98	63.873	ENSCVAG00000002595	chd1l	91	63.574	Cyprinodon_variegatus
ENSMOCG00000006305	Chd1l	97	65.311	ENSDARG00000015471	chd1l	86	65.135	Danio_rerio
ENSMOCG00000006305	Chd1l	99	85.539	ENSDNOG00000019504	CHD1L	99	85.539	Dasypus_novemcinctus
ENSMOCG00000006305	Chd1l	100	81.858	ENSDORG00000013555	Chd1l	100	81.858	Dipodomys_ordii
ENSMOCG00000006305	Chd1l	88	79.510	ENSETEG00000008445	CHD1L	89	79.510	Echinops_telfairi
ENSMOCG00000006305	Chd1l	65	62.500	ENSEBUG00000005791	chd1l	77	62.500	Eptatretus_burgeri
ENSMOCG00000006305	Chd1l	99	85.906	ENSEASG00005007364	CHD1L	100	86.852	Equus_asinus_asinus
ENSMOCG00000006305	Chd1l	99	85.794	ENSECAG00000008915	CHD1L	100	86.731	Equus_caballus
ENSMOCG00000006305	Chd1l	96	54.857	ENSELUG00000016844	chd1l	85	54.157	Esox_lucius
ENSMOCG00000006305	Chd1l	99	84.761	ENSFCAG00000007777	CHD1L	99	85.428	Felis_catus
ENSMOCG00000006305	Chd1l	99	70.166	ENSFALG00000006087	CHD1L	99	70.861	Ficedula_albicollis
ENSMOCG00000006305	Chd1l	94	86.423	ENSFDAG00000012431	CHD1L	100	86.690	Fukomys_damarensis
ENSMOCG00000006305	Chd1l	98	62.825	ENSFHEG00000012420	chd1l	86	63.390	Fundulus_heteroclitus
ENSMOCG00000006305	Chd1l	97	71.429	ENSGALG00000015038	CHD1L	99	70.726	Gallus_gallus
ENSMOCG00000006305	Chd1l	97	64.376	ENSGAFG00000018198	chd1l	97	61.628	Gambusia_affinis
ENSMOCG00000006305	Chd1l	58	67.176	ENSGACG00000014042	chd1l	100	67.176	Gasterosteus_aculeatus
ENSMOCG00000006305	Chd1l	95	75.673	ENSGAGG00000014432	CHD1L	96	75.673	Gopherus_agassizii
ENSMOCG00000006305	Chd1l	99	86.222	ENSGGOG00000001067	CHD1L	99	86.222	Gorilla_gorilla
ENSMOCG00000006305	Chd1l	98	64.512	ENSHBUG00000007464	chd1l	97	64.977	Haplochromis_burtoni
ENSMOCG00000006305	Chd1l	100	83.796	ENSHGLG00000008933	CHD1L	100	84.684	Heterocephalus_glaber_female
ENSMOCG00000006305	Chd1l	95	83.236	ENSHGLG00100007155	CHD1L	100	83.837	Heterocephalus_glaber_male
ENSMOCG00000006305	Chd1l	94	62.959	ENSHCOG00000012787	chd1l	92	63.432	Hippocampus_comes
ENSMOCG00000006305	Chd1l	99	59.643	ENSIPUG00000022617	chd1l	87	58.915	Ictalurus_punctatus
ENSMOCG00000006305	Chd1l	100	78.135	ENSSTOG00000007032	CHD1L	100	78.135	Ictidomys_tridecemlineatus
ENSMOCG00000006305	Chd1l	99	63.444	ENSKMAG00000014358	chd1l	88	63.778	Kryptolebias_marmoratus
ENSMOCG00000006305	Chd1l	97	63.337	ENSLBEG00000023845	chd1l	96	64.087	Labrus_bergylta
ENSMOCG00000006305	Chd1l	96	64.645	ENSLACG00000006262	CHD1L	86	64.447	Latimeria_chalumnae
ENSMOCG00000006305	Chd1l	95	70.093	ENSLOCG00000010574	chd1l	86	69.610	Lepisosteus_oculatus
ENSMOCG00000006305	Chd1l	96	86.374	ENSLAFG00000018136	CHD1L	100	86.628	Loxodonta_africana
ENSMOCG00000006305	Chd1l	96	86.736	ENSMFAG00000043562	CHD1L	100	87.904	Macaca_fascicularis
ENSMOCG00000006305	Chd1l	99	86.889	ENSMMUG00000009024	CHD1L	99	86.889	Macaca_mulatta
ENSMOCG00000006305	Chd1l	99	87.000	ENSMNEG00000039905	CHD1L	99	87.000	Macaca_nemestrina
ENSMOCG00000006305	Chd1l	99	87.222	ENSMLEG00000030900	CHD1L	99	87.222	Mandrillus_leucophaeus
ENSMOCG00000006305	Chd1l	98	63.337	ENSMAMG00000012822	chd1l	98	62.181	Mastacembelus_armatus
ENSMOCG00000006305	Chd1l	98	64.626	ENSMZEG00005020830	chd1l	88	64.773	Maylandia_zebra
ENSMOCG00000006305	Chd1l	96	70.867	ENSMGAG00000014304	CHD1L	100	71.478	Meleagris_gallopavo
ENSMOCG00000006305	Chd1l	99	86.986	ENSMICG00000002497	CHD1L	99	86.986	Microcebus_murinus
ENSMOCG00000006305	Chd1l	96	61.264	ENSMMOG00000005964	chd1l	90	61.264	Mola_mola
ENSMOCG00000006305	Chd1l	99	77.358	ENSMODG00000018717	CHD1L	99	77.691	Monodelphis_domestica
ENSMOCG00000006305	Chd1l	98	63.873	ENSMALG00000014675	chd1l	86	64.439	Monopterus_albus
ENSMOCG00000006305	Chd1l	100	90.597	MGP_CAROLIEiJ_G0025401	Chd1l	100	90.597	Mus_caroli
ENSMOCG00000006305	Chd1l	100	90.698	ENSMUSG00000028089	Chd1l	100	90.698	Mus_musculus
ENSMOCG00000006305	Chd1l	100	90.798	MGP_PahariEiJ_G0026845	Chd1l	100	90.798	Mus_pahari
ENSMOCG00000006305	Chd1l	100	90.919	MGP_SPRETEiJ_G0026347	Chd1l	100	90.919	Mus_spretus
ENSMOCG00000006305	Chd1l	99	85.056	ENSMPUG00000000615	CHD1L	98	85.056	Mustela_putorius_furo
ENSMOCG00000006305	Chd1l	99	83.793	ENSMLUG00000007573	CHD1L	99	83.903	Myotis_lucifugus
ENSMOCG00000006305	Chd1l	97	85.845	ENSNGAG00000000908	Chd1l	99	85.845	Nannospalax_galili
ENSMOCG00000006305	Chd1l	98	61.910	ENSNBRG00000006021	chd1l	96	62.599	Neolamprologus_brichardi
ENSMOCG00000006305	Chd1l	99	86.556	ENSNLEG00000000179	CHD1L	99	86.556	Nomascus_leucogenys
ENSMOCG00000006305	Chd1l	95	75.146	ENSOPRG00000006973	CHD1L	99	75.146	Ochotona_princeps
ENSMOCG00000006305	Chd1l	100	81.506	ENSODEG00000002494	CHD1L	100	82.080	Octodon_degus
ENSMOCG00000006305	Chd1l	98	63.964	ENSONIG00000003183	chd1l	89	65.000	Oreochromis_niloticus
ENSMOCG00000006305	Chd1l	86	71.831	ENSOANG00000003068	CHD1L	93	72.471	Ornithorhynchus_anatinus
ENSMOCG00000006305	Chd1l	100	81.579	ENSOCUG00000009336	CHD1L	99	81.140	Oryctolagus_cuniculus
ENSMOCG00000006305	Chd1l	95	63.912	ENSORLG00000003673	chd1l	93	64.028	Oryzias_latipes
ENSMOCG00000006305	Chd1l	95	63.615	ENSORLG00020005123	chd1l	94	65.476	Oryzias_latipes_hni
ENSMOCG00000006305	Chd1l	98	62.683	ENSORLG00015001680	chd1l	99	62.809	Oryzias_latipes_hsok
ENSMOCG00000006305	Chd1l	85	57.792	ENSOMEG00000006109	chd1l	86	57.792	Oryzias_melastigma
ENSMOCG00000006305	Chd1l	99	84.427	ENSOGAG00000008775	CHD1L	99	84.427	Otolemur_garnettii
ENSMOCG00000006305	Chd1l	99	84.504	ENSOARG00000020547	CHD1L	99	85.830	Ovis_aries
ENSMOCG00000006305	Chd1l	97	86.057	ENSPPAG00000039193	CHD1L	100	87.665	Pan_paniscus
ENSMOCG00000006305	Chd1l	99	85.428	ENSPPRG00000010258	CHD1L	99	85.428	Panthera_pardus
ENSMOCG00000006305	Chd1l	98	87.035	ENSPTRG00000001220	CHD1L	99	86.667	Pan_troglodytes
ENSMOCG00000006305	Chd1l	99	87.111	ENSPANG00000009170	CHD1L	99	87.111	Papio_anubis
ENSMOCG00000006305	Chd1l	99	64.286	ENSPKIG00000022166	chd1l	97	63.756	Paramormyrops_kingsleyae
ENSMOCG00000006305	Chd1l	98	74.717	ENSPSIG00000012595	CHD1L	96	75.543	Pelodiscus_sinensis
ENSMOCG00000006305	Chd1l	99	90.807	ENSPEMG00000013528	Chd1l	100	91.251	Peromyscus_maniculatus_bairdii
ENSMOCG00000006305	Chd1l	93	78.922	ENSPCIG00000030409	CHD1L	100	79.401	Phascolarctos_cinereus
ENSMOCG00000006305	Chd1l	98	63.873	ENSPFOG00000015948	chd1l	86	63.873	Poecilia_formosa
ENSMOCG00000006305	Chd1l	98	64.586	ENSPLAG00000015145	chd1l	98	63.554	Poecilia_latipinna
ENSMOCG00000006305	Chd1l	98	63.750	ENSPMEG00000008720	chd1l	91	64.205	Poecilia_mexicana
ENSMOCG00000006305	Chd1l	96	63.121	ENSPREG00000017885	chd1l	97	63.006	Poecilia_reticulata
ENSMOCG00000006305	Chd1l	99	87.319	ENSPPYG00000000946	CHD1L	99	87.319	Pongo_abelii
ENSMOCG00000006305	Chd1l	99	73.192	ENSPCAG00000005959	CHD1L	99	73.860	Procavia_capensis
ENSMOCG00000006305	Chd1l	95	79.064	ENSPVAG00000006084	CHD1L	100	79.064	Pteropus_vampyrus
ENSMOCG00000006305	Chd1l	96	65.172	ENSPNYG00000013001	chd1l	96	65.092	Pundamilia_nyererei
ENSMOCG00000006305	Chd1l	98	63.770	ENSPNAG00000011881	chd1l	87	63.496	Pygocentrus_nattereri
ENSMOCG00000006305	Chd1l	100	90.144	ENSRNOG00000017669	Chd1l	100	91.251	Rattus_norvegicus
ENSMOCG00000006305	Chd1l	99	85.667	ENSRBIG00000041272	CHD1L	99	85.667	Rhinopithecus_bieti
ENSMOCG00000006305	Chd1l	97	86.073	ENSRROG00000041354	CHD1L	98	85.991	Rhinopithecus_roxellana
ENSMOCG00000006305	Chd1l	99	74.219	ENSSHAG00000017395	CHD1L	99	74.413	Sarcophilus_harrisii
ENSMOCG00000006305	Chd1l	98	65.045	ENSSFOG00015003649	chd1l	97	64.302	Scleropages_formosus
ENSMOCG00000006305	Chd1l	97	61.573	ENSSMAG00000019377	chd1l	96	60.568	Scophthalmus_maximus
ENSMOCG00000006305	Chd1l	95	64.411	ENSSDUG00000019831	chd1l	95	64.294	Seriola_dumerili
ENSMOCG00000006305	Chd1l	96	64.277	ENSSLDG00000012714	chd1l	96	64.277	Seriola_lalandi_dorsalis
ENSMOCG00000006305	Chd1l	99	70.792	ENSSPUG00000016865	CHD1L	100	71.349	Sphenodon_punctatus
ENSMOCG00000006305	Chd1l	98	64.326	ENSSPAG00000017653	chd1l	93	64.752	Stegastes_partitus
ENSMOCG00000006305	Chd1l	98	82.864	ENSSSCG00000006701	CHD1L	100	82.517	Sus_scrofa
ENSMOCG00000006305	Chd1l	95	72.854	ENSTGUG00000013392	-	100	72.582	Taeniopygia_guttata
ENSMOCG00000006305	Chd1l	95	59.604	ENSTNIG00000004902	chd1l	99	59.139	Tetraodon_nigroviridis
ENSMOCG00000006305	Chd1l	96	83.333	ENSTTRG00000011711	CHD1L	100	83.333	Tursiops_truncatus
ENSMOCG00000006305	Chd1l	99	84.983	ENSUAMG00000021991	CHD1L	99	85.095	Ursus_americanus
ENSMOCG00000006305	Chd1l	99	84.761	ENSUMAG00000009733	CHD1L	99	84.761	Ursus_maritimus
ENSMOCG00000006305	Chd1l	99	84.667	ENSVVUG00000007316	CHD1L	94	85.911	Vulpes_vulpes
ENSMOCG00000006305	Chd1l	98	61.889	ENSXCOG00000008336	chd1l	86	61.889	Xiphophorus_couchianus
ENSMOCG00000006305	Chd1l	98	64.505	ENSXMAG00000015898	chd1l	98	59.930	Xiphophorus_maculatus