EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000006356 (Gene tree)
Gene ID: 101991519
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 24099 bases
Position: chrJH996459.1:3213506-3237604
Accession: 101991519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006686	POP1	PF06978.11	4.5e-39	1	2
ENSMOCP00000006686	POP1	PF06978.11	4.5e-39	2	2
ENSMOCP00000006684	POP1	PF06978.11	5e-39	1	2
ENSMOCP00000006684	POP1	PF06978.11	5e-39	2	2
ENSMOCP00000006686	POPLD	PF08170.12	3.7e-26	1	1
ENSMOCP00000006684	POPLD	PF08170.12	3.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000008263	-	3043	XM_005368137	ENSMOCP00000006686	1011 (aa)	XP_005368194	UPI00038C1D62
ENSMOCT00000008259	-	3133	XM_005368136	ENSMOCP00000006684	1041 (aa)	XP_005368193	UPI00038C11DE

Gene Model

Click here to download ENSMOCG00000006356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006356	Pop1	100	76.465	ENSG00000104356	POP1	100	83.607	Homo_sapiens
ENSMOCG00000006356	Pop1	100	47.533	ENSAPOG00000008198	pop1	100	47.098	Acanthochromis_polyacanthus
ENSMOCG00000006356	Pop1	100	72.521	ENSAMEG00000000556	POP1	100	72.144	Ailuropoda_melanoleuca
ENSMOCG00000006356	Pop1	90	48.830	ENSACIG00000004169	POP1	93	49.149	Amphilophus_citrinellus
ENSMOCG00000006356	Pop1	100	46.300	ENSAOCG00000010991	pop1	100	46.351	Amphiprion_ocellaris
ENSMOCG00000006356	Pop1	91	45.816	ENSAPEG00000007607	pop1	96	46.082	Amphiprion_percula
ENSMOCG00000006356	Pop1	100	45.403	ENSATEG00000024814	POP1	100	45.758	Anabas_testudineus
ENSMOCG00000006356	Pop1	92	59.642	ENSAPLG00000014418	POP1	99	59.451	Anas_platyrhynchos
ENSMOCG00000006356	Pop1	100	54.396	ENSACAG00000016083	POP1	100	53.964	Anolis_carolinensis
ENSMOCG00000006356	Pop1	88	84.524	ENSANAG00000026360	POP1	99	84.524	Aotus_nancymaae
ENSMOCG00000006356	Pop1	100	47.338	ENSACLG00000010951	pop1	100	47.137	Astatotilapia_calliptera
ENSMOCG00000006356	Pop1	100	45.125	ENSAMXG00000014483	POP1	100	43.454	Astyanax_mexicanus
ENSMOCG00000006356	Pop1	100	72.168	ENSBTAG00000012596	POP1	100	72.211	Bos_taurus
ENSMOCG00000006356	Pop1	100	75.293	ENSCJAG00000015567	POP1	100	74.414	Callithrix_jacchus
ENSMOCG00000006356	Pop1	100	74.016	ENSCAFG00000000469	POP1	100	73.622	Canis_familiaris
ENSMOCG00000006356	Pop1	100	73.998	ENSCAFG00020026765	POP1	100	73.607	Canis_lupus_dingo
ENSMOCG00000006356	Pop1	100	72.727	ENSCHIG00000017066	POP1	100	72.141	Capra_hircus
ENSMOCG00000006356	Pop1	100	76.074	ENSTSYG00000003097	POP1	100	75.195	Carlito_syrichta
ENSMOCG00000006356	Pop1	100	72.754	ENSCAPG00000007251	POP1	100	72.656	Cavia_aperea
ENSMOCG00000006356	Pop1	100	75.074	ENSCPOG00000002901	POP1	100	74.975	Cavia_porcellus
ENSMOCG00000006356	Pop1	100	75.000	ENSCCAG00000018939	POP1	100	74.219	Cebus_capucinus
ENSMOCG00000006356	Pop1	100	75.781	ENSCATG00000040916	POP1	100	75.098	Cercocebus_atys
ENSMOCG00000006356	Pop1	100	76.667	ENSCLAG00000007208	POP1	97	76.078	Chinchilla_lanigera
ENSMOCG00000006356	Pop1	90	75.922	ENSCSAG00000012340	POP1	99	75.271	Chlorocebus_sabaeus
ENSMOCG00000006356	Pop1	95	73.299	ENSCHOG00000011432	POP1	96	78.224	Choloepus_hoffmanni
ENSMOCG00000006356	Pop1	100	62.170	ENSCPBG00000006373	POP1	100	62.427	Chrysemys_picta_bellii
ENSMOCG00000006356	Pop1	83	36.965	ENSCING00000008323	-	88	36.965	Ciona_intestinalis
ENSMOCG00000006356	Pop1	100	75.977	ENSCANG00000001647	POP1	100	75.293	Colobus_angolensis_palliatus
ENSMOCG00000006356	Pop1	100	84.926	ENSCGRG00001017308	Pop1	100	84.729	Cricetulus_griseus_chok1gshd
ENSMOCG00000006356	Pop1	100	79.015	ENSCGRG00000010824	Pop1	100	78.818	Cricetulus_griseus_crigri
ENSMOCG00000006356	Pop1	100	44.772	ENSCSEG00000008737	POP1	100	44.287	Cynoglossus_semilaevis
ENSMOCG00000006356	Pop1	100	46.737	ENSCVAG00000022248	pop1	100	46.583	Cyprinodon_variegatus
ENSMOCG00000006356	Pop1	100	72.753	ENSDNOG00000019974	POP1	100	72.566	Dasypus_novemcinctus
ENSMOCG00000006356	Pop1	100	67.813	ENSDORG00000015384	Pop1	100	67.049	Dipodomys_ordii
ENSMOCG00000006356	Pop1	62	34.591	FBgn0026702	l(1)G0045	70	34.013	Drosophila_melanogaster
ENSMOCG00000006356	Pop1	89	67.193	ENSETEG00000007839	POP1	88	67.193	Echinops_telfairi
ENSMOCG00000006356	Pop1	100	74.976	ENSEASG00005003189	POP1	98	74.487	Equus_asinus_asinus
ENSMOCG00000006356	Pop1	100	74.487	ENSECAG00000024236	POP1	100	73.998	Equus_caballus
ENSMOCG00000006356	Pop1	67	68.062	ENSEEUG00000003050	-	70	66.960	Erinaceus_europaeus
ENSMOCG00000006356	Pop1	100	46.183	ENSELUG00000003526	pop1	100	46.827	Esox_lucius
ENSMOCG00000006356	Pop1	100	75.464	ENSFCAG00000002168	POP1	100	74.976	Felis_catus
ENSMOCG00000006356	Pop1	100	56.961	ENSFALG00000005711	POP1	100	56.754	Ficedula_albicollis
ENSMOCG00000006356	Pop1	100	76.298	ENSFDAG00000017068	POP1	100	75.514	Fukomys_damarensis
ENSMOCG00000006356	Pop1	100	46.030	ENSFHEG00000019518	pop1	100	46.249	Fundulus_heteroclitus
ENSMOCG00000006356	Pop1	92	46.273	ENSGMOG00000000659	POP1	97	46.458	Gadus_morhua
ENSMOCG00000006356	Pop1	100	46.429	ENSGAFG00000019770	POP1	100	46.377	Gambusia_affinis
ENSMOCG00000006356	Pop1	100	45.594	ENSGACG00000003499	pop1	100	44.861	Gasterosteus_aculeatus
ENSMOCG00000006356	Pop1	100	61.538	ENSGAGG00000011737	POP1	98	61.501	Gopherus_agassizii
ENSMOCG00000006356	Pop1	100	76.270	ENSGGOG00000003176	POP1	100	75.391	Gorilla_gorilla
ENSMOCG00000006356	Pop1	100	47.233	ENSHBUG00000021583	pop1	100	47.137	Haplochromis_burtoni
ENSMOCG00000006356	Pop1	100	76.051	ENSHGLG00000006029	POP1	100	75.660	Heterocephalus_glaber_female
ENSMOCG00000006356	Pop1	100	76.051	ENSHGLG00100016879	POP1	100	75.660	Heterocephalus_glaber_male
ENSMOCG00000006356	Pop1	90	48.120	ENSHCOG00000013888	pop1	96	47.953	Hippocampus_comes
ENSMOCG00000006356	Pop1	99	44.793	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSMOCG00000006356	Pop1	100	77.647	ENSSTOG00000011455	POP1	97	77.157	Ictidomys_tridecemlineatus
ENSMOCG00000006356	Pop1	100	73.346	ENSJJAG00000013325	Pop1	100	73.050	Jaculus_jaculus
ENSMOCG00000006356	Pop1	100	45.769	ENSKMAG00000001346	POP1	100	45.750	Kryptolebias_marmoratus
ENSMOCG00000006356	Pop1	89	47.546	ENSLBEG00000024457	POP1	95	47.481	Labrus_bergylta
ENSMOCG00000006356	Pop1	93	56.447	ENSLACG00000012498	POP1	100	55.701	Latimeria_chalumnae
ENSMOCG00000006356	Pop1	100	49.613	ENSLOCG00000009817	POP1	100	49.520	Lepisosteus_oculatus
ENSMOCG00000006356	Pop1	100	75.536	ENSLAFG00000010770	POP1	100	75.049	Loxodonta_africana
ENSMOCG00000006356	Pop1	100	75.977	ENSMFAG00000000347	POP1	100	75.293	Macaca_fascicularis
ENSMOCG00000006356	Pop1	100	75.781	ENSMNEG00000036870	POP1	100	75.098	Macaca_nemestrina
ENSMOCG00000006356	Pop1	100	75.781	ENSMLEG00000034986	POP1	100	75.488	Mandrillus_leucophaeus
ENSMOCG00000006356	Pop1	100	45.869	ENSMAMG00000004040	pop1	100	46.036	Mastacembelus_armatus
ENSMOCG00000006356	Pop1	100	47.137	ENSMZEG00005025448	pop1	100	47.233	Maylandia_zebra
ENSMOCG00000006356	Pop1	100	56.670	ENSMGAG00000012167	POP1	100	56.497	Meleagris_gallopavo
ENSMOCG00000006356	Pop1	100	85.086	ENSMAUG00000017537	Pop1	100	84.417	Mesocricetus_auratus
ENSMOCG00000006356	Pop1	100	76.344	ENSMICG00000004361	POP1	100	76.344	Microcebus_murinus
ENSMOCG00000006356	Pop1	100	43.500	ENSMMOG00000018242	pop1	100	43.135	Mola_mola
ENSMOCG00000006356	Pop1	100	64.341	ENSMODG00000006561	POP1	100	63.795	Monodelphis_domestica
ENSMOCG00000006356	Pop1	100	46.986	ENSMALG00000012621	POP1	100	46.821	Monopterus_albus
ENSMOCG00000006356	Pop1	100	83.828	MGP_CAROLIEiJ_G0019726	Pop1	100	83.349	Mus_caroli
ENSMOCG00000006356	Pop1	100	83.349	ENSMUSG00000022325	Pop1	100	82.871	Mus_musculus
ENSMOCG00000006356	Pop1	100	83.541	MGP_PahariEiJ_G0019735	Pop1	100	82.967	Mus_pahari
ENSMOCG00000006356	Pop1	100	82.967	MGP_SPRETEiJ_G0020622	Pop1	100	82.584	Mus_spretus
ENSMOCG00000006356	Pop1	100	72.833	ENSMPUG00000015250	POP1	100	72.444	Mustela_putorius_furo
ENSMOCG00000006356	Pop1	100	70.215	ENSMLUG00000010204	POP1	100	69.320	Myotis_lucifugus
ENSMOCG00000006356	Pop1	100	81.238	ENSNGAG00000001582	Pop1	100	80.943	Nannospalax_galili
ENSMOCG00000006356	Pop1	89	48.482	ENSNBRG00000002356	pop1	94	48.339	Neolamprologus_brichardi
ENSMOCG00000006356	Pop1	100	76.172	ENSNLEG00000002541	POP1	100	75.293	Nomascus_leucogenys
ENSMOCG00000006356	Pop1	93	56.907	ENSMEUG00000003118	POP1	98	56.526	Notamacropus_eugenii
ENSMOCG00000006356	Pop1	100	72.244	ENSOPRG00000007667	POP1	100	71.961	Ochotona_princeps
ENSMOCG00000006356	Pop1	100	74.755	ENSODEG00000003984	POP1	100	74.364	Octodon_degus
ENSMOCG00000006356	Pop1	100	47.805	ENSONIG00000016445	pop1	100	47.615	Oreochromis_niloticus
ENSMOCG00000006356	Pop1	62	70.122	ENSOANG00000001278	-	94	70.122	Ornithorhynchus_anatinus
ENSMOCG00000006356	Pop1	100	73.715	ENSOCUG00000017400	POP1	100	73.230	Oryctolagus_cuniculus
ENSMOCG00000006356	Pop1	92	48.677	ENSORLG00000002839	pop1	100	46.401	Oryzias_latipes
ENSMOCG00000006356	Pop1	90	47.840	ENSORLG00020022450	POP1	96	47.892	Oryzias_latipes_hni
ENSMOCG00000006356	Pop1	92	48.674	ENSORLG00015012746	POP1	100	46.784	Oryzias_latipes_hsok
ENSMOCG00000006356	Pop1	100	47.013	ENSOMEG00000006915	pop1	99	46.575	Oryzias_melastigma
ENSMOCG00000006356	Pop1	100	74.194	ENSOGAG00000001466	POP1	100	73.900	Otolemur_garnettii
ENSMOCG00000006356	Pop1	100	76.367	ENSPPAG00000018410	POP1	100	75.488	Pan_paniscus
ENSMOCG00000006356	Pop1	100	75.488	ENSPPRG00000005002	POP1	100	75.000	Panthera_pardus
ENSMOCG00000006356	Pop1	100	75.684	ENSPTIG00000016527	POP1	100	75.195	Panthera_tigris_altaica
ENSMOCG00000006356	Pop1	100	76.562	ENSPTRG00000020458	POP1	100	75.684	Pan_troglodytes
ENSMOCG00000006356	Pop1	100	76.074	ENSPANG00000009704	POP1	100	75.781	Papio_anubis
ENSMOCG00000006356	Pop1	100	50.000	ENSPKIG00000016325	POP1	100	49.370	Paramormyrops_kingsleyae
ENSMOCG00000006356	Pop1	100	60.397	ENSPSIG00000012343	POP1	100	60.775	Pelodiscus_sinensis
ENSMOCG00000006356	Pop1	90	48.253	ENSPMGG00000022253	POP1	95	47.548	Periophthalmus_magnuspinnatus
ENSMOCG00000006356	Pop1	99	86.385	ENSPEMG00000023633	Pop1	100	86.290	Peromyscus_maniculatus_bairdii
ENSMOCG00000006356	Pop1	90	44.089	ENSPMAG00000003209	POP1	100	43.983	Petromyzon_marinus
ENSMOCG00000006356	Pop1	100	62.284	ENSPCIG00000012216	POP1	100	61.996	Phascolarctos_cinereus
ENSMOCG00000006356	Pop1	100	47.278	ENSPFOG00000012490	POP1	100	47.278	Poecilia_formosa
ENSMOCG00000006356	Pop1	100	46.756	ENSPLAG00000004646	POP1	100	46.558	Poecilia_latipinna
ENSMOCG00000006356	Pop1	100	46.667	ENSPMEG00000019592	POP1	100	46.997	Poecilia_mexicana
ENSMOCG00000006356	Pop1	100	47.252	ENSPREG00000020951	POP1	100	47.019	Poecilia_reticulata
ENSMOCG00000006356	Pop1	100	75.879	ENSPPYG00000018777	POP1	100	75.000	Pongo_abelii
ENSMOCG00000006356	Pop1	100	69.833	ENSPCAG00000016662	POP1	100	69.442	Procavia_capensis
ENSMOCG00000006356	Pop1	100	76.149	ENSPCOG00000019420	POP1	100	75.660	Propithecus_coquereli
ENSMOCG00000006356	Pop1	100	73.438	ENSPVAG00000014468	POP1	100	73.145	Pteropus_vampyrus
ENSMOCG00000006356	Pop1	89	48.637	ENSPNYG00000004476	pop1	95	48.652	Pundamilia_nyererei
ENSMOCG00000006356	Pop1	100	45.023	ENSPNAG00000000265	pop1	100	42.804	Pygocentrus_nattereri
ENSMOCG00000006356	Pop1	100	84.019	ENSRNOG00000005243	Pop1	100	83.349	Rattus_norvegicus
ENSMOCG00000006356	Pop1	100	76.172	ENSRBIG00000007996	POP1	100	75.781	Rhinopithecus_bieti
ENSMOCG00000006356	Pop1	100	76.074	ENSRROG00000012334	POP1	100	75.293	Rhinopithecus_roxellana
ENSMOCG00000006356	Pop1	99	76.063	ENSSBOG00000020830	POP1	100	75.173	Saimiri_boliviensis_boliviensis
ENSMOCG00000006356	Pop1	100	64.540	ENSSHAG00000000296	POP1	100	64.393	Sarcophilus_harrisii
ENSMOCG00000006356	Pop1	100	48.450	ENSSFOG00015007429	pop1	99	48.353	Scleropages_formosus
ENSMOCG00000006356	Pop1	93	46.162	ENSSMAG00000010467	POP1	99	46.992	Scophthalmus_maximus
ENSMOCG00000006356	Pop1	100	46.000	ENSSDUG00000007817	POP1	100	46.418	Seriola_dumerili
ENSMOCG00000006356	Pop1	100	46.381	ENSSLDG00000012565	POP1	100	46.660	Seriola_lalandi_dorsalis
ENSMOCG00000006356	Pop1	100	56.195	ENSSPUG00000003550	-	100	56.019	Sphenodon_punctatus
ENSMOCG00000006356	Pop1	90	49.239	ENSSPAG00000014955	pop1	94	48.751	Stegastes_partitus
ENSMOCG00000006356	Pop1	100	73.990	ENSSSCG00000006078	POP1	100	73.990	Sus_scrofa
ENSMOCG00000006356	Pop1	92	54.681	ENSTGUG00000012011	-	100	54.681	Taeniopygia_guttata
ENSMOCG00000006356	Pop1	91	47.396	ENSTRUG00000010856	pop1	94	46.617	Takifugu_rubripes
ENSMOCG00000006356	Pop1	92	48.109	ENSTNIG00000013297	pop1	99	48.218	Tetraodon_nigroviridis
ENSMOCG00000006356	Pop1	95	72.205	ENSTBEG00000014214	POP1	99	72.205	Tupaia_belangeri
ENSMOCG00000006356	Pop1	100	73.216	ENSTTRG00000016071	POP1	100	73.118	Tursiops_truncatus
ENSMOCG00000006356	Pop1	99	70.949	ENSUAMG00000017309	POP1	100	70.553	Ursus_americanus
ENSMOCG00000006356	Pop1	91	84.615	ENSUMAG00000016952	POP1	100	84.615	Ursus_maritimus
ENSMOCG00000006356	Pop1	83	83.942	ENSVPAG00000008278	POP1	82	83.942	Vicugna_pacos
ENSMOCG00000006356	Pop1	100	74.194	ENSVVUG00000010994	POP1	100	73.900	Vulpes_vulpes
ENSMOCG00000006356	Pop1	100	42.490	ENSXCOG00000017043	POP1	100	42.490	Xiphophorus_couchianus
ENSMOCG00000006356	Pop1	100	46.463	ENSXMAG00000002472	POP1	100	46.469	Xiphophorus_maculatus