EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000006448 (Gene tree)
Gene ID: 101993644
Gene Symbol: Rab17
Alias: -
Full Name: RAB17%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 17699 bases
Position: chrLG4:60816984-60834682
Accession: 101993644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006764	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000008377	-	722	XM_005361702	ENSMOCP00000006764	213 (aa)	XP_005361759	UPI00038C0AA9

Gene Model

Click here to download ENSMOCG00000006448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000006448	Rab17	91	44.845	ENSMOCG00000009706	Rab5a	90	44.845
ENSMOCG00000006448	Rab17	76	36.196	ENSMOCG00000018796	Rab15	76	36.196
ENSMOCG00000006448	Rab17	76	34.356	ENSMOCG00000011313	Kras	85	34.356
ENSMOCG00000006448	Rab17	84	36.111	ENSMOCG00000006994	Rab39b	84	36.111
ENSMOCG00000006448	Rab17	90	36.269	ENSMOCG00000012268	Rab22a	97	36.269
ENSMOCG00000006448	Rab17	92	35.025	ENSMOCG00000021448	Rab13	96	35.025
ENSMOCG00000006448	Rab17	75	42.236	ENSMOCG00000001455	Rab6b	77	42.236
ENSMOCG00000006448	Rab17	50	33.051	ENSMOCG00000015237	Rabl3	50	33.051
ENSMOCG00000006448	Rab17	54	30.172	ENSMOCG00000015961	Arl3	62	30.172
ENSMOCG00000006448	Rab17	92	36.715	ENSMOCG00000012667	Rab11b	94	36.715
ENSMOCG00000006448	Rab17	81	33.908	ENSMOCG00000000444	Rab23	73	33.908
ENSMOCG00000006448	Rab17	80	36.207	ENSMOCG00000022240	Rheb	94	36.207
ENSMOCG00000006448	Rab17	83	33.516	ENSMOCG00000019866	Rab33b	77	33.516
ENSMOCG00000006448	Rab17	76	34.356	ENSMOCG00000000744	Hras	85	34.356
ENSMOCG00000006448	Rab17	80	30.168	ENSMOCG00000015357	Dnajc27	65	30.168
ENSMOCG00000006448	Rab17	79	33.333	ENSMOCG00000010381	Rab9b	99	32.212
ENSMOCG00000006448	Rab17	77	40.964	ENSMOCG00000013044	Rab18	80	40.964
ENSMOCG00000006448	Rab17	92	36.098	ENSMOCG00000021138	Rab11a	94	36.098
ENSMOCG00000006448	Rab17	81	33.333	ENSMOCG00000020142	Rab33a	77	33.333
ENSMOCG00000006448	Rab17	92	37.438	ENSMOCG00000010953	Rab25	94	37.438
ENSMOCG00000006448	Rab17	90	38.021	ENSMOCG00000003760	Rab14	88	38.021
ENSMOCG00000006448	Rab17	84	35.519	ENSMOCG00000000452	Rab12	75	36.364
ENSMOCG00000006448	Rab17	93	30.769	ENSMOCG00000015920	Rab9	99	30.769
ENSMOCG00000006448	Rab17	77	36.310	ENSMOCG00000002760	Rab7	81	36.310
ENSMOCG00000006448	Rab17	76	34.969	ENSMOCG00000022441	Nras	85	34.969
ENSMOCG00000006448	Rab17	92	35.533	ENSMOCG00000017022	Rab1a	97	35.533
ENSMOCG00000006448	Rab17	81	37.356	ENSMOCG00000014673	Rab1b	86	37.356
ENSMOCG00000006448	Rab17	91	32.487	ENSMOCG00000019999	Rab35	97	32.487
ENSMOCG00000006448	Rab17	92	37.255	ENSMOCG00000009821	-	95	37.255
ENSMOCG00000006448	Rab17	54	30.769	ENSMOCG00000002133	Arl4d	57	30.769
ENSMOCG00000006448	Rab17	55	30.508	ENSMOCG00000011687	Arl8a	61	30.508
ENSMOCG00000006448	Rab17	100	43.519	ENSMOCG00000018531	-	99	43.519
ENSMOCG00000006448	Rab17	54	31.624	ENSMOCG00000018769	Arl8b	61	31.624
ENSMOCG00000006448	Rab17	55	36.975	ENSMOCG00000004529	Rab36	70	31.720
ENSMOCG00000006448	Rab17	82	31.183	ENSMOCG00000000626	Rasl11a	75	31.183
ENSMOCG00000006448	Rab17	78	41.071	ENSMOCG00000013161	Rab2b	94	36.893
ENSMOCG00000006448	Rab17	75	43.478	ENSMOCG00000014387	Rab6a	77	43.478
ENSMOCG00000006448	Rab17	62	32.576	ENSMOCG00000002775	Rabl2	59	32.576
ENSMOCG00000006448	Rab17	78	41.071	ENSMOCG00000014140	Rab2a	79	41.071
ENSMOCG00000006448	Rab17	60	37.209	ENSMOCG00000016580	Rab34	50	37.209
ENSMOCG00000006448	Rab17	80	38.286	ENSMOCG00000021639	Rab42	81	38.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006448	Rab17	86	50.000	ENSACIG00000006949	RAB17	82	50.000	Amphilophus_citrinellus
ENSMOCG00000006448	Rab17	75	53.750	ENSAOCG00000009167	-	70	53.750	Amphiprion_ocellaris
ENSMOCG00000006448	Rab17	75	53.125	ENSAPEG00000002915	RAB17	70	53.125	Amphiprion_percula
ENSMOCG00000006448	Rab17	84	59.551	ENSACAG00000004554	RAB17	80	59.551	Anolis_carolinensis
ENSMOCG00000006448	Rab17	85	50.543	ENSACLG00000001218	RAB17	81	50.543	Astatotilapia_calliptera
ENSMOCG00000006448	Rab17	100	70.423	ENSFCAG00000012724	RAB17	99	70.423	Felis_catus
ENSMOCG00000006448	Rab17	99	53.023	ENSFALG00000012783	RAB17	99	53.023	Ficedula_albicollis
ENSMOCG00000006448	Rab17	99	55.869	ENSGALG00000003899	RAB17	99	55.869	Gallus_gallus
ENSMOCG00000006448	Rab17	85	50.543	ENSHBUG00000001462	RAB17	81	50.543	Haplochromis_burtoni
ENSMOCG00000006448	Rab17	86	42.021	ENSLBEG00000027691	RAB17	81	42.021	Labrus_bergylta
ENSMOCG00000006448	Rab17	85	50.543	ENSMZEG00005013677	RAB17	81	50.543	Maylandia_zebra
ENSMOCG00000006448	Rab17	99	55.869	ENSMGAG00000003135	RAB17	98	55.869	Meleagris_gallopavo
ENSMOCG00000006448	Rab17	77	53.939	ENSMMOG00000019258	RAB17	73	53.939	Mola_mola
ENSMOCG00000006448	Rab17	99	61.792	ENSMODG00000008949	RAB17	99	61.792	Monodelphis_domestica
ENSMOCG00000006448	Rab17	77	54.545	ENSNBRG00000017793	RAB17	74	54.545	Neolamprologus_brichardi
ENSMOCG00000006448	Rab17	83	68.182	ENSMEUG00000005002	RAB17	100	68.182	Notamacropus_eugenii
ENSMOCG00000006448	Rab17	85	51.087	ENSONIG00000016776	RAB17	88	54.717	Oreochromis_niloticus
ENSMOCG00000006448	Rab17	100	70.892	ENSPPRG00000003974	RAB17	99	70.892	Panthera_pardus
ENSMOCG00000006448	Rab17	100	68.075	ENSPTIG00000014452	RAB17	99	68.075	Panthera_tigris_altaica
ENSMOCG00000006448	Rab17	96	53.883	ENSPSIG00000016995	RAB17	87	53.883	Pelodiscus_sinensis
ENSMOCG00000006448	Rab17	98	62.981	ENSPCIG00000021558	-	72	62.981	Phascolarctos_cinereus
ENSMOCG00000006448	Rab17	85	50.543	ENSPNYG00000011135	RAB17	81	50.543	Pundamilia_nyererei
ENSMOCG00000006448	Rab17	99	61.792	ENSSHAG00000009306	RAB17	99	61.792	Sarcophilus_harrisii
ENSMOCG00000006448	Rab17	77	53.939	ENSSDUG00000006618	RAB17	73	53.939	Seriola_dumerili
ENSMOCG00000006448	Rab17	77	54.545	ENSSLDG00000020918	RAB17	73	54.545	Seriola_lalandi_dorsalis
ENSMOCG00000006448	Rab17	60	62.205	ENSSPUG00000015409	RAB17	59	62.205	Sphenodon_punctatus
ENSMOCG00000006448	Rab17	78	51.497	ENSSPAG00000022624	-	75	51.497	Stegastes_partitus
ENSMOCG00000006448	Rab17	99	51.887	ENSTGUG00000003786	RAB17	100	51.887	Taeniopygia_guttata