EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000006534 (Gene tree)
Gene ID: 102000342
Gene Symbol: Srp19
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr18:22824247-22830624
Accession: 102000342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006829	SRP19	PF01922.17	5.5e-30	1	1
ENSMOCP00000006834	SRP19	PF01922.17	1.2e-15	1	2
ENSMOCP00000006834	SRP19	PF01922.17	1.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000008481	-	363	-	ENSMOCP00000006834	120 (aa)	-	UPI00038C168D
ENSMOCT00000008475	-	874	XM_005355901	ENSMOCP00000006829	144 (aa)	XP_005355958	UPI00038C4714

Gene Model

Click here to download ENSMOCG00000006534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000006534	Srp19	74	99.057	ENSMOCG00000010532	-	97	99.057
ENSMOCG00000006534	Srp19	94	73.333	ENSMOCG00000010964	-	94	73.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006534	Srp19	100	97.500	ENSG00000153037	SRP19	100	98.020	Homo_sapiens
ENSMOCG00000006534	Srp19	90	69.767	ENSAPOG00000002199	srp19	89	70.312	Acanthochromis_polyacanthus
ENSMOCG00000006534	Srp19	94	96.296	ENSAMEG00000012623	SRP19	92	96.296	Ailuropoda_melanoleuca
ENSMOCG00000006534	Srp19	89	67.969	ENSACIG00000005082	srp19	89	67.969	Amphilophus_citrinellus
ENSMOCG00000006534	Srp19	90	68.992	ENSAOCG00000002718	srp19	90	69.531	Amphiprion_ocellaris
ENSMOCG00000006534	Srp19	90	68.992	ENSAPEG00000022170	srp19	90	69.531	Amphiprion_percula
ENSMOCG00000006534	Srp19	90	70.543	ENSATEG00000012472	srp19	91	70.543	Anabas_testudineus
ENSMOCG00000006534	Srp19	78	84.071	ENSAPLG00000002624	SRP19	93	83.478	Anas_platyrhynchos
ENSMOCG00000006534	Srp19	92	77.444	ENSACAG00000007550	SRP19	92	77.037	Anolis_carolinensis
ENSMOCG00000006534	Srp19	95	72.263	ENSANAG00000030287	-	97	72.727	Aotus_nancymaae
ENSMOCG00000006534	Srp19	100	97.500	ENSANAG00000032576	-	100	97.500	Aotus_nancymaae
ENSMOCG00000006534	Srp19	90	74.615	ENSANAG00000029862	-	89	86.598	Aotus_nancymaae
ENSMOCG00000006534	Srp19	89	66.406	ENSACLG00000006259	srp19	90	66.406	Astatotilapia_calliptera
ENSMOCG00000006534	Srp19	88	68.504	ENSAMXG00000043011	srp19	91	68.217	Astyanax_mexicanus
ENSMOCG00000006534	Srp19	94	94.815	ENSBTAG00000012803	SRP19	94	94.815	Bos_taurus
ENSMOCG00000006534	Srp19	82	50.000	WBGene00018159	F37F2.2	82	50.000	Caenorhabditis_elegans
ENSMOCG00000006534	Srp19	91	71.756	ENSCJAG00000045531	-	85	71.429	Callithrix_jacchus
ENSMOCG00000006534	Srp19	100	97.500	ENSCJAG00000038676	-	100	97.500	Callithrix_jacchus
ENSMOCG00000006534	Srp19	94	95.556	ENSCAFG00000031549	SRP19	94	95.556	Canis_familiaris
ENSMOCG00000006534	Srp19	64	91.304	ENSCAFG00020004285	-	86	91.667	Canis_lupus_dingo
ENSMOCG00000006534	Srp19	94	95.556	ENSCAFG00020014267	-	94	95.556	Canis_lupus_dingo
ENSMOCG00000006534	Srp19	92	96.970	ENSCAFG00020022437	-	99	96.970	Canis_lupus_dingo
ENSMOCG00000006534	Srp19	94	94.815	ENSCHIG00000017551	SRP19	94	94.815	Capra_hircus
ENSMOCG00000006534	Srp19	94	96.296	ENSTSYG00000007875	SRP19	94	96.296	Carlito_syrichta
ENSMOCG00000006534	Srp19	99	74.825	ENSCPOG00000036806	SRP19	83	89.189	Cavia_porcellus
ENSMOCG00000006534	Srp19	92	75.940	ENSCCAG00000023426	-	87	75.940	Cebus_capucinus
ENSMOCG00000006534	Srp19	92	71.212	ENSCCAG00000029821	-	66	71.212	Cebus_capucinus
ENSMOCG00000006534	Srp19	100	97.500	ENSCCAG00000035651	-	100	97.500	Cebus_capucinus
ENSMOCG00000006534	Srp19	94	88.889	ENSCATG00000039250	-	93	88.889	Cercocebus_atys
ENSMOCG00000006534	Srp19	90	80.769	ENSCATG00000040513	-	80	81.061	Cercocebus_atys
ENSMOCG00000006534	Srp19	94	94.074	ENSCLAG00000004791	-	94	94.074	Chinchilla_lanigera
ENSMOCG00000006534	Srp19	94	88.148	ENSCLAG00000016055	-	93	88.148	Chinchilla_lanigera
ENSMOCG00000006534	Srp19	94	95.556	ENSCHOG00000013452	SRP19	94	95.556	Choloepus_hoffmanni
ENSMOCG00000006534	Srp19	92	78.195	ENSCPBG00000013903	SRP19	94	77.778	Chrysemys_picta_bellii
ENSMOCG00000006534	Srp19	100	97.917	ENSCGRG00001020510	Srp19	100	97.917	Cricetulus_griseus_chok1gshd
ENSMOCG00000006534	Srp19	67	93.069	ENSCGRG00000010716	-	89	93.069	Cricetulus_griseus_crigri
ENSMOCG00000006534	Srp19	83	89.167	ENSCGRG00000008542	-	92	89.167	Cricetulus_griseus_crigri
ENSMOCG00000006534	Srp19	89	69.531	ENSCSEG00000010039	srp19	91	68.992	Cynoglossus_semilaevis
ENSMOCG00000006534	Srp19	88	70.866	ENSCVAG00000017621	srp19	89	70.866	Cyprinodon_variegatus
ENSMOCG00000006534	Srp19	88	72.222	ENSDARG00000035699	srp19	90	71.875	Danio_rerio
ENSMOCG00000006534	Srp19	94	94.815	ENSDNOG00000013856	SRP19	94	94.815	Dasypus_novemcinctus
ENSMOCG00000006534	Srp19	74	96.226	ENSDORG00000004746	Srp19	83	96.226	Dipodomys_ordii
ENSMOCG00000006534	Srp19	80	52.174	FBgn0015298	Srp19	70	53.097	Drosophila_melanogaster
ENSMOCG00000006534	Srp19	94	91.111	ENSETEG00000017132	SRP19	94	91.111	Echinops_telfairi
ENSMOCG00000006534	Srp19	81	65.517	ENSEBUG00000006613	srp19	88	63.200	Eptatretus_burgeri
ENSMOCG00000006534	Srp19	94	95.556	ENSEASG00005015182	SRP19	94	95.556	Equus_asinus_asinus
ENSMOCG00000006534	Srp19	94	94.815	ENSEEUG00000007298	SRP19	94	94.815	Erinaceus_europaeus
ENSMOCG00000006534	Srp19	89	70.312	ENSELUG00000007958	srp19	91	70.000	Esox_lucius
ENSMOCG00000006534	Srp19	90	67.442	ENSELUG00000004594	srp19	91	67.442	Esox_lucius
ENSMOCG00000006534	Srp19	94	96.296	ENSFCAG00000025895	SRP19	96	94.340	Felis_catus
ENSMOCG00000006534	Srp19	94	94.815	ENSFDAG00000013543	SRP19	94	94.815	Fukomys_damarensis
ENSMOCG00000006534	Srp19	78	70.536	ENSFHEG00000000493	srp19	89	70.866	Fundulus_heteroclitus
ENSMOCG00000006534	Srp19	83	71.667	ENSGMOG00000003264	srp19	93	71.667	Gadus_morhua
ENSMOCG00000006534	Srp19	92	82.707	ENSGALG00000000218	SRP19	94	82.222	Gallus_gallus
ENSMOCG00000006534	Srp19	88	69.291	ENSGAFG00000015815	srp19	61	69.291	Gambusia_affinis
ENSMOCG00000006534	Srp19	88	70.866	ENSGACG00000001093	srp19	85	70.866	Gasterosteus_aculeatus
ENSMOCG00000006534	Srp19	92	78.947	ENSGAGG00000025305	SRP19	94	78.519	Gopherus_agassizii
ENSMOCG00000006534	Srp19	90	66.923	ENSHBUG00000006131	srp19	90	66.923	Haplochromis_burtoni
ENSMOCG00000006534	Srp19	94	95.556	ENSHGLG00000006075	SRP19	94	95.556	Heterocephalus_glaber_female
ENSMOCG00000006534	Srp19	94	95.556	ENSHGLG00100015859	SRP19	94	95.556	Heterocephalus_glaber_male
ENSMOCG00000006534	Srp19	93	65.672	ENSHCOG00000013231	srp19	94	65.672	Hippocampus_comes
ENSMOCG00000006534	Srp19	90	69.369	ENSIPUG00000025084	srp19	92	69.643	Ictalurus_punctatus
ENSMOCG00000006534	Srp19	94	94.815	ENSSTOG00000000348	SRP19	94	94.815	Ictidomys_tridecemlineatus
ENSMOCG00000006534	Srp19	94	95.556	ENSJJAG00000017185	Srp19	94	95.556	Jaculus_jaculus
ENSMOCG00000006534	Srp19	88	71.654	ENSKMAG00000011155	srp19	89	71.654	Kryptolebias_marmoratus
ENSMOCG00000006534	Srp19	88	70.079	ENSLBEG00000026727	srp19	89	70.079	Labrus_bergylta
ENSMOCG00000006534	Srp19	88	80.159	ENSLACG00000004459	SRP19	82	80.315	Latimeria_chalumnae
ENSMOCG00000006534	Srp19	92	72.932	ENSLOCG00000010302	srp19	94	72.593	Lepisosteus_oculatus
ENSMOCG00000006534	Srp19	94	94.815	ENSLAFG00000002564	SRP19	94	94.815	Loxodonta_africana
ENSMOCG00000006534	Srp19	94	86.667	ENSMFAG00000000554	-	93	86.667	Macaca_fascicularis
ENSMOCG00000006534	Srp19	83	72.269	ENSMFAG00000040055	-	90	72.727	Macaca_fascicularis
ENSMOCG00000006534	Srp19	85	81.301	ENSMMUG00000032515	-	92	81.600	Macaca_mulatta
ENSMOCG00000006534	Srp19	94	86.667	ENSMMUG00000049186	-	93	86.667	Macaca_mulatta
ENSMOCG00000006534	Srp19	100	96.667	ENSMNEG00000038714	SRP19	100	96.667	Macaca_nemestrina
ENSMOCG00000006534	Srp19	83	71.429	ENSMNEG00000040117	-	90	71.901	Macaca_nemestrina
ENSMOCG00000006534	Srp19	93	69.403	ENSMAMG00000018346	srp19	93	69.403	Mastacembelus_armatus
ENSMOCG00000006534	Srp19	90	66.923	ENSMZEG00005001765	srp19	90	66.923	Maylandia_zebra
ENSMOCG00000006534	Srp19	83	84.167	ENSMGAG00000006762	SRP19	93	83.607	Meleagris_gallopavo
ENSMOCG00000006534	Srp19	67	85.567	ENSMICG00000049202	-	91	86.139	Microcebus_murinus
ENSMOCG00000006534	Srp19	94	94.074	ENSMICG00000000399	SRP19	94	94.074	Microcebus_murinus
ENSMOCG00000006534	Srp19	92	68.421	ENSMMOG00000010417	srp19	86	68.421	Mola_mola
ENSMOCG00000006534	Srp19	88	91.339	ENSMODG00000013278	SRP19	90	90.698	Monodelphis_domestica
ENSMOCG00000006534	Srp19	88	72.441	ENSMALG00000003858	srp19	89	72.441	Monopterus_albus
ENSMOCG00000006534	Srp19	100	97.917	MGP_CAROLIEiJ_G0022086	Srp19	100	97.917	Mus_caroli
ENSMOCG00000006534	Srp19	100	97.917	ENSMUSG00000014504	Srp19	100	97.917	Mus_musculus
ENSMOCG00000006534	Srp19	100	97.917	MGP_PahariEiJ_G0018820	Srp19	100	97.917	Mus_pahari
ENSMOCG00000006534	Srp19	100	97.917	MGP_SPRETEiJ_G0022998	Srp19	100	97.917	Mus_spretus
ENSMOCG00000006534	Srp19	100	97.222	ENSMPUG00000012695	SRP19	99	97.222	Mustela_putorius_furo
ENSMOCG00000006534	Srp19	94	95.556	ENSMLUG00000014793	-	94	95.556	Myotis_lucifugus
ENSMOCG00000006534	Srp19	86	91.129	ENSMLUG00000024549	-	91	90.476	Myotis_lucifugus
ENSMOCG00000006534	Srp19	94	95.556	ENSNGAG00000003440	-	94	95.556	Nannospalax_galili
ENSMOCG00000006534	Srp19	90	86.154	ENSNGAG00000014524	-	100	86.154	Nannospalax_galili
ENSMOCG00000006534	Srp19	94	80.741	ENSNLEG00000035364	-	94	80.741	Nomascus_leucogenys
ENSMOCG00000006534	Srp19	83	92.437	ENSMEUG00000012529	SRP19	93	91.736	Notamacropus_eugenii
ENSMOCG00000006534	Srp19	81	93.162	ENSOPRG00000010549	SRP19	93	91.736	Ochotona_princeps
ENSMOCG00000006534	Srp19	91	90.076	ENSODEG00000019119	-	94	89.630	Octodon_degus
ENSMOCG00000006534	Srp19	94	78.519	ENSODEG00000013862	-	94	78.519	Octodon_degus
ENSMOCG00000006534	Srp19	67	92.784	ENSODEG00000005538	-	85	92.784	Octodon_degus
ENSMOCG00000006534	Srp19	89	66.406	ENSONIG00000000542	srp19	90	66.406	Oreochromis_niloticus
ENSMOCG00000006534	Srp19	88	81.746	ENSOANG00000011139	SRP19	73	81.890	Ornithorhynchus_anatinus
ENSMOCG00000006534	Srp19	94	92.647	ENSOCUG00000015639	SRP19	94	92.647	Oryctolagus_cuniculus
ENSMOCG00000006534	Srp19	90	68.992	ENSORLG00000028267	srp19	92	68.462	Oryzias_latipes
ENSMOCG00000006534	Srp19	90	68.992	ENSORLG00020015201	srp19	92	68.462	Oryzias_latipes_hni
ENSMOCG00000006534	Srp19	90	68.992	ENSORLG00015007525	srp19	92	68.462	Oryzias_latipes_hsok
ENSMOCG00000006534	Srp19	90	70.543	ENSOMEG00000009178	srp19	92	70.000	Oryzias_melastigma
ENSMOCG00000006534	Srp19	94	95.556	ENSOGAG00000008579	SRP19	94	95.556	Otolemur_garnettii
ENSMOCG00000006534	Srp19	94	94.074	ENSOARG00000016066	SRP19	94	94.074	Ovis_aries
ENSMOCG00000006534	Srp19	100	97.500	ENSPPAG00000037062	SRP19	100	97.500	Pan_paniscus
ENSMOCG00000006534	Srp19	94	96.296	ENSPPRG00000015591	SRP19	96	94.340	Panthera_pardus
ENSMOCG00000006534	Srp19	94	96.296	ENSPTIG00000021474	SRP19	96	94.340	Panthera_tigris_altaica
ENSMOCG00000006534	Srp19	100	97.500	ENSPTRG00000017136	SRP19	100	97.500	Pan_troglodytes
ENSMOCG00000006534	Srp19	94	88.148	ENSPANG00000034740	-	93	88.148	Papio_anubis
ENSMOCG00000006534	Srp19	100	96.667	ENSPANG00000004370	-	100	96.667	Papio_anubis
ENSMOCG00000006534	Srp19	92	69.091	ENSPKIG00000018671	srp19	91	69.767	Paramormyrops_kingsleyae
ENSMOCG00000006534	Srp19	83	80.833	ENSPSIG00000013811	SRP19	93	80.328	Pelodiscus_sinensis
ENSMOCG00000006534	Srp19	90	70.543	ENSPMGG00000015313	srp19	90	71.094	Periophthalmus_magnuspinnatus
ENSMOCG00000006534	Srp19	100	94.444	ENSPEMG00000004412	-	100	94.444	Peromyscus_maniculatus_bairdii
ENSMOCG00000006534	Srp19	90	64.615	ENSPMAG00000002685	srp19	91	65.116	Petromyzon_marinus
ENSMOCG00000006534	Srp19	91	91.743	ENSPCIG00000010250	SRP19	92	90.991	Phascolarctos_cinereus
ENSMOCG00000006534	Srp19	88	70.866	ENSPFOG00000015887	srp19	89	70.866	Poecilia_formosa
ENSMOCG00000006534	Srp19	88	70.866	ENSPLAG00000007784	srp19	89	70.866	Poecilia_latipinna
ENSMOCG00000006534	Srp19	88	70.079	ENSPMEG00000003056	srp19	89	70.079	Poecilia_mexicana
ENSMOCG00000006534	Srp19	88	70.866	ENSPREG00000017307	srp19	89	70.866	Poecilia_reticulata
ENSMOCG00000006534	Srp19	100	97.222	ENSPPYG00000029584	SRP19	99	97.222	Pongo_abelii
ENSMOCG00000006534	Srp19	94	75.556	ENSPCAG00000000228	SRP19	94	75.556	Procavia_capensis
ENSMOCG00000006534	Srp19	94	95.556	ENSPCOG00000023239	SRP19	94	95.556	Propithecus_coquereli
ENSMOCG00000006534	Srp19	94	94.815	ENSPVAG00000004895	SRP19	94	94.815	Pteropus_vampyrus
ENSMOCG00000006534	Srp19	88	67.460	ENSPNAG00000009392	srp19	88	69.167	Pygocentrus_nattereri
ENSMOCG00000006534	Srp19	100	97.917	ENSRNOG00000020204	Srp19	100	97.917	Rattus_norvegicus
ENSMOCG00000006534	Srp19	52	90.667	ENSRBIG00000031651	-	83	90.667	Rhinopithecus_bieti
ENSMOCG00000006534	Srp19	100	96.667	ENSRBIG00000015627	-	100	96.667	Rhinopithecus_bieti
ENSMOCG00000006534	Srp19	92	86.466	ENSRBIG00000040440	-	93	86.567	Rhinopithecus_bieti
ENSMOCG00000006534	Srp19	92	86.466	ENSRROG00000037054	-	93	86.567	Rhinopithecus_roxellana
ENSMOCG00000006534	Srp19	86	75.806	ENSRROG00000037316	-	92	76.423	Rhinopithecus_roxellana
ENSMOCG00000006534	Srp19	94	68.889	ENSSBOG00000032685	-	89	76.768	Saimiri_boliviensis_boliviensis
ENSMOCG00000006534	Srp19	100	97.500	ENSSBOG00000028071	-	100	97.500	Saimiri_boliviensis_boliviensis
ENSMOCG00000006534	Srp19	90	72.093	ENSSFOG00015022139	srp19	91	72.093	Scleropages_formosus
ENSMOCG00000006534	Srp19	89	67.969	ENSSMAG00000016803	srp19	89	67.969	Scophthalmus_maximus
ENSMOCG00000006534	Srp19	90	62.143	ENSSDUG00000012930	srp19	91	62.143	Seriola_dumerili
ENSMOCG00000006534	Srp19	61	53.409	ENSSLDG00000021916	-	57	54.286	Seriola_lalandi_dorsalis
ENSMOCG00000006534	Srp19	94	92.593	ENSSARG00000000615	SRP19	94	92.593	Sorex_araneus
ENSMOCG00000006534	Srp19	85	84.553	ENSSPUG00000015769	SRP19	91	83.333	Sphenodon_punctatus
ENSMOCG00000006534	Srp19	94	95.556	ENSSSCG00000026230	SRP19	94	95.556	Sus_scrofa
ENSMOCG00000006534	Srp19	85	83.740	ENSTGUG00000001019	SRP19	92	82.090	Taeniopygia_guttata
ENSMOCG00000006534	Srp19	88	71.538	ENSTRUG00000023119	srp19	90	71.538	Takifugu_rubripes
ENSMOCG00000006534	Srp19	90	69.767	ENSTNIG00000018880	srp19	90	70.312	Tetraodon_nigroviridis
ENSMOCG00000006534	Srp19	94	94.074	ENSTTRG00000001690	SRP19	94	94.074	Tursiops_truncatus
ENSMOCG00000006534	Srp19	91	96.947	ENSUAMG00000000111	SRP19	94	97.037	Ursus_americanus
ENSMOCG00000006534	Srp19	100	97.222	ENSUMAG00000016997	SRP19	100	97.222	Ursus_maritimus
ENSMOCG00000006534	Srp19	94	96.296	ENSVPAG00000006001	SRP19	94	96.296	Vicugna_pacos
ENSMOCG00000006534	Srp19	67	94.845	ENSVVUG00000012423	SRP19	88	95.652	Vulpes_vulpes
ENSMOCG00000006534	Srp19	84	72.727	ENSXETG00000011993	srp19	85	72.727	Xenopus_tropicalis
ENSMOCG00000006534	Srp19	69	66.000	ENSXCOG00000012530	srp19	70	66.000	Xiphophorus_couchianus
ENSMOCG00000006534	Srp19	92	70.455	ENSXMAG00000029788	srp19	89	71.654	Xiphophorus_maculatus