EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000006763 (Gene tree)
Gene ID
101982673
Gene Symbol
Pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Minus strand
Length
14485 bases
Position
chr10:61271329-61285813
Accession
101982673
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000007041PABPPF00658.181.5e-3111
ENSMOCP00000007038PABPPF00658.181.5e-3111
ENSMOCP00000007036PABPPF00658.181.7e-3111
ENSMOCP00000007041RRM_5PF13893.61.3e-0912
ENSMOCP00000007041RRM_5PF13893.61.3e-0922
ENSMOCP00000007038RRM_5PF13893.61.5e-0912
ENSMOCP00000007038RRM_5PF13893.61.5e-0922
ENSMOCP00000007036RRM_5PF13893.61.9e-0912
ENSMOCP00000007036RRM_5PF13893.61.9e-0922
ENSMOCP00000007041RRM_1PF00076.224.9e-9214
ENSMOCP00000007041RRM_1PF00076.224.9e-9224
ENSMOCP00000007041RRM_1PF00076.224.9e-9234
ENSMOCP00000007041RRM_1PF00076.224.9e-9244
ENSMOCP00000007038RRM_1PF00076.225.5e-9214
ENSMOCP00000007038RRM_1PF00076.225.5e-9224
ENSMOCP00000007038RRM_1PF00076.225.5e-9234
ENSMOCP00000007038RRM_1PF00076.225.5e-9244
ENSMOCP00000007036RRM_1PF00076.227e-9214
ENSMOCP00000007036RRM_1PF00076.227e-9224
ENSMOCP00000007036RRM_1PF00076.227e-9234
ENSMOCP00000007036RRM_1PF00076.227e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000008790-1866-ENSMOCP00000007041621 (aa)--
ENSMOCT00000008787-1908XM_005353291ENSMOCP00000007038635 (aa)XP_005353348UPI00038C15E1
ENSMOCT00000008785-1995XM_005353289ENSMOCP00000007036664 (aa)XP_005353346UPI00038C503B
Gene Model
Click here to download ENSMOCG00000006763's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006763's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000006763Pabpc49089.431ENSMOCG00000018191-9789.431
ENSMOCG00000006763Pabpc45937.500ENSMOCG00000004765Celf26137.500
ENSMOCG00000006763Pabpc46269.565ENSMOCG00000007551Pabpc4l9970.137
ENSMOCG00000006763Pabpc45036.111ENSMOCG00000001511Rbm36336.111
ENSMOCG00000006763Pabpc49660.691ENSMOCG00000013186Pabpc1l9959.300
ENSMOCG00000006763Pabpc45830.769ENSMOCG00000014244Tial17931.250
ENSMOCG00000006763Pabpc45830.189ENSMOCG00000018898-8530.189
ENSMOCG00000006763Pabpc49968.504ENSMOCG00000001354Pabpc29869.378
ENSMOCG00000006763Pabpc49976.369ENSMOCG00000004921-9877.215
ENSMOCG00000006763Pabpc46031.579ENSMOCG00000016960Elavl28634.940
ENSMOCG00000006763Pabpc45533.333ENSMOCG00000021968-5133.113
ENSMOCG00000006763Pabpc45967.697ENSMOCG00000001554Pabpc59567.493
ENSMOCG00000006763Pabpc46032.099ENSMOCG00000010309Elavl49030.625
ENSMOCG00000006763Pabpc45237.113ENSMOCG00000002573Celf67337.113
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000006763Pabpc410097.741ENSG00000090621PABPC4100100.000Homo_sapiens
ENSMOCG00000006763Pabpc49884.091ENSAPOG00000001161pabpc410084.051Acanthochromis_polyacanthus
ENSMOCG00000006763Pabpc49756.888ENSAMEG00000015083-9856.564Ailuropoda_melanoleuca
ENSMOCG00000006763Pabpc410097.590ENSAMEG00000011535-10097.590Ailuropoda_melanoleuca
ENSMOCG00000006763Pabpc410084.062ENSACIG00000023343pabpc410083.754Amphilophus_citrinellus
ENSMOCG00000006763Pabpc49884.253ENSAOCG00000021529pabpc410084.211Amphiprion_ocellaris
ENSMOCG00000006763Pabpc49884.253ENSAPEG00000019196pabpc410084.211Amphiprion_percula
ENSMOCG00000006763Pabpc49883.657ENSATEG00000007402pabpc410083.758Anabas_testudineus
ENSMOCG00000006763Pabpc49990.635ENSAPLG00000009729-9991.200Anas_platyrhynchos
ENSMOCG00000006763Pabpc49989.624ENSACAG00000002544PABPC49990.416Anolis_carolinensis
ENSMOCG00000006763Pabpc410097.892ENSANAG00000025079PABPC410097.892Aotus_nancymaae
ENSMOCG00000006763Pabpc410083.438ENSACLG00000019558pabpc410083.968Astatotilapia_calliptera
ENSMOCG00000006763Pabpc49978.493ENSAMXG00000018779pabpc49979.650Astyanax_mexicanus
ENSMOCG00000006763Pabpc410095.338ENSBTAG00000017125PABPC410095.338Bos_taurus
ENSMOCG00000006763Pabpc45886.826ENSBTAG00000048536-9386.826Bos_taurus
ENSMOCG00000006763Pabpc47194.872ENSCJAG00000045953-9288.066Callithrix_jacchus
ENSMOCG00000006763Pabpc410097.440ENSCJAG00000002512-10097.440Callithrix_jacchus
ENSMOCG00000006763Pabpc410097.795ENSCAFG00000003081PABPC410097.795Canis_familiaris
ENSMOCG00000006763Pabpc410097.741ENSCAFG00020004161PABPC410097.741Canis_lupus_dingo
ENSMOCG00000006763Pabpc49975.758ENSCHIG00000023385-9976.147Capra_hircus
ENSMOCG00000006763Pabpc410097.741ENSCHIG00000019398-10097.741Capra_hircus
ENSMOCG00000006763Pabpc410097.590ENSTSYG00000006532PABPC410097.590Carlito_syrichta
ENSMOCG00000006763Pabpc49998.036ENSCAPG00000015984PABPC410098.036Cavia_aperea
ENSMOCG00000006763Pabpc410098.042ENSCPOG00000009552PABPC410098.042Cavia_porcellus
ENSMOCG00000006763Pabpc410097.590ENSCCAG00000037306PABPC410097.590Cebus_capucinus
ENSMOCG00000006763Pabpc410097.892ENSCATG00000042164PABPC410097.892Cercocebus_atys
ENSMOCG00000006763Pabpc410097.892ENSCLAG00000011899PABPC410097.892Chinchilla_lanigera
ENSMOCG00000006763Pabpc410097.892ENSCSAG00000001135PABPC410097.892Chlorocebus_sabaeus
ENSMOCG00000006763Pabpc48896.570ENSCHOG00000005327PABPC48096.570Choloepus_hoffmanni
ENSMOCG00000006763Pabpc49990.952ENSCPBG00000001038PABPC49991.520Chrysemys_picta_bellii
ENSMOCG00000006763Pabpc49997.710ENSCANG00000034177PABPC410097.710Colobus_angolensis_palliatus
ENSMOCG00000006763Pabpc410098.645ENSCGRG00001018166Pabpc410098.645Cricetulus_griseus_chok1gshd
ENSMOCG00000006763Pabpc49996.183ENSCGRG00000009777Pabpc410096.183Cricetulus_griseus_crigri
ENSMOCG00000006763Pabpc410082.484ENSCSEG00000000130pabpc410083.016Cynoglossus_semilaevis
ENSMOCG00000006763Pabpc49983.144ENSCVAG00000019246pabpc49984.539Cyprinodon_variegatus
ENSMOCG00000006763Pabpc49884.786ENSDARG00000059259pabpc410085.691Danio_rerio
ENSMOCG00000006763Pabpc49997.340ENSDNOG00000018444-10097.340Dasypus_novemcinctus
ENSMOCG00000006763Pabpc410095.934ENSDORG00000011581Pabpc410095.934Dipodomys_ordii
ENSMOCG00000006763Pabpc48564.259ENSETEG00000009172-9964.259Echinops_telfairi
ENSMOCG00000006763Pabpc4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSMOCG00000006763Pabpc49976.935ENSEBUG00000000992pabpc49980.562Eptatretus_burgeri
ENSMOCG00000006763Pabpc49776.737ENSEBUG00000013782pabpc49975.911Eptatretus_burgeri
ENSMOCG00000006763Pabpc410097.741ENSEASG00005014119PABPC410097.741Equus_asinus_asinus
ENSMOCG00000006763Pabpc410097.741ENSECAG00000009396PABPC410097.741Equus_caballus
ENSMOCG00000006763Pabpc410094.729ENSEEUG00000002962PABPC410094.729Erinaceus_europaeus
ENSMOCG00000006763Pabpc49883.439ENSELUG00000003195pabpc49983.412Esox_lucius
ENSMOCG00000006763Pabpc410097.892ENSFCAG00000015254-10097.892Felis_catus
ENSMOCG00000006763Pabpc49990.476ENSFALG00000000543PABPC49991.040Ficedula_albicollis
ENSMOCG00000006763Pabpc48966.667ENSFDAG00000010581-9962.309Fukomys_damarensis
ENSMOCG00000006763Pabpc410097.892ENSFDAG00000020016-10097.892Fukomys_damarensis
ENSMOCG00000006763Pabpc49982.942ENSFHEG00000007548pabpc49192.632Fundulus_heteroclitus
ENSMOCG00000006763Pabpc410082.995ENSGMOG00000019025pabpc49884.127Gadus_morhua
ENSMOCG00000006763Pabpc49991.270ENSGALG00000003800PABPC49991.840Gallus_gallus
ENSMOCG00000006763Pabpc49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSMOCG00000006763Pabpc410082.006ENSGACG00000007179pabpc410082.643Gasterosteus_aculeatus
ENSMOCG00000006763Pabpc49991.111ENSGAGG00000001888PABPC49991.680Gopherus_agassizii
ENSMOCG00000006763Pabpc410097.741ENSGGOG00000004002PABPC410097.741Gorilla_gorilla
ENSMOCG00000006763Pabpc410083.594ENSHBUG00000020206pabpc410084.127Haplochromis_burtoni
ENSMOCG00000006763Pabpc410098.042ENSHGLG00000011162PABPC410098.042Heterocephalus_glaber_female
ENSMOCG00000006763Pabpc410097.953ENSHGLG00100001580PABPC410097.953Heterocephalus_glaber_male
ENSMOCG00000006763Pabpc410082.316ENSHCOG00000012694pabpc410082.353Hippocampus_comes
ENSMOCG00000006763Pabpc49783.146ENSIPUG00000016620pabpc49982.137Ictalurus_punctatus
ENSMOCG00000006763Pabpc410095.482ENSSTOG00000010416PABPC410095.482Ictidomys_tridecemlineatus
ENSMOCG00000006763Pabpc410093.223ENSJJAG00000007781Pabpc410093.223Jaculus_jaculus
ENSMOCG00000006763Pabpc410091.076ENSKMAG00000013597pabpc49983.710Kryptolebias_marmoratus
ENSMOCG00000006763Pabpc410083.016ENSLBEG00000013654pabpc49883.819Labrus_bergylta
ENSMOCG00000006763Pabpc49987.224ENSLACG00000011907PABPC49987.758Latimeria_chalumnae
ENSMOCG00000006763Pabpc49985.377ENSLOCG00000001877pabpc49986.804Lepisosteus_oculatus
ENSMOCG00000006763Pabpc410097.892ENSLAFG00000000151PABPC410097.892Loxodonta_africana
ENSMOCG00000006763Pabpc410097.892ENSMFAG00000041481PABPC410097.892Macaca_fascicularis
ENSMOCG00000006763Pabpc410097.892ENSMMUG00000007497PABPC410097.892Macaca_mulatta
ENSMOCG00000006763Pabpc410097.741ENSMNEG00000043054PABPC410097.741Macaca_nemestrina
ENSMOCG00000006763Pabpc410097.892ENSMLEG00000040716PABPC410097.892Mandrillus_leucophaeus
ENSMOCG00000006763Pabpc49883.657ENSMAMG00000010025pabpc410083.758Mastacembelus_armatus
ENSMOCG00000006763Pabpc410083.281ENSMZEG00005006141pabpc410083.810Maylandia_zebra
ENSMOCG00000006763Pabpc49986.242ENSMGAG00000005408PABPC49987.629Meleagris_gallopavo
ENSMOCG00000006763Pabpc410080.675ENSMAUG00000019763-10080.675Mesocricetus_auratus
ENSMOCG00000006763Pabpc45881.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSMOCG00000006763Pabpc47190.385ENSMAUG00000001295-9790.385Mesocricetus_auratus
ENSMOCG00000006763Pabpc48895.196ENSMICG00000016633-9798.298Microcebus_murinus
ENSMOCG00000006763Pabpc49981.013ENSMICG00000036729-9984.353Microcebus_murinus
ENSMOCG00000006763Pabpc410082.212ENSMMOG00000002363pabpc410081.546Mola_mola
ENSMOCG00000006763Pabpc46073.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSMOCG00000006763Pabpc49789.043ENSMODG00000017657-9988.855Monodelphis_domestica
ENSMOCG00000006763Pabpc49883.387ENSMALG00000011017pabpc410083.492Monopterus_albus
ENSMOCG00000006763Pabpc49997.424MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSMOCG00000006763Pabpc49983.390MGP_CAROLIEiJ_G0024864-9983.904Mus_caroli
ENSMOCG00000006763Pabpc49997.879ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSMOCG00000006763Pabpc49997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSMOCG00000006763Pabpc49978.603MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSMOCG00000006763Pabpc49552.980ENSMPUG00000006836-10051.907Mustela_putorius_furo
ENSMOCG00000006763Pabpc410097.892ENSMPUG00000014414-10097.892Mustela_putorius_furo
ENSMOCG00000006763Pabpc49995.246ENSMLUG00000012068PABPC410095.246Myotis_lucifugus
ENSMOCG00000006763Pabpc410095.783ENSNGAG00000018292Pabpc410095.783Nannospalax_galili
ENSMOCG00000006763Pabpc46886.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSMOCG00000006763Pabpc46092.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSMOCG00000006763Pabpc410097.795ENSNLEG00000011928PABPC410097.795Nomascus_leucogenys
ENSMOCG00000006763Pabpc49095.238ENSOPRG00000011984PABPC48797.684Ochotona_princeps
ENSMOCG00000006763Pabpc45485.714ENSODEG00000013457-10085.714Octodon_degus
ENSMOCG00000006763Pabpc49988.090ENSODEG00000017434-9988.843Octodon_degus
ENSMOCG00000006763Pabpc410097.289ENSODEG00000006592-10097.289Octodon_degus
ENSMOCG00000006763Pabpc410083.594ENSONIG00000008176pabpc410084.127Oreochromis_niloticus
ENSMOCG00000006763Pabpc49990.794ENSOANG00000010001PABPC49991.360Ornithorhynchus_anatinus
ENSMOCG00000006763Pabpc49598.101ENSOCUG00000000562PABPC48898.101Oryctolagus_cuniculus
ENSMOCG00000006763Pabpc49990.432ENSORLG00000017479pabpc49790.432Oryzias_latipes
ENSMOCG00000006763Pabpc49990.432ENSORLG00020018644pabpc49790.432Oryzias_latipes_hni
ENSMOCG00000006763Pabpc49990.432ENSORLG00015015042pabpc49790.432Oryzias_latipes_hsok
ENSMOCG00000006763Pabpc49883.604ENSOMEG00000014410pabpc49884.142Oryzias_melastigma
ENSMOCG00000006763Pabpc410095.052ENSOGAG00000004067PABPC410095.052Otolemur_garnettii
ENSMOCG00000006763Pabpc410097.741ENSOARG00000020060PABPC410097.741Ovis_aries
ENSMOCG00000006763Pabpc410097.741ENSPPAG00000043625PABPC410097.741Pan_paniscus
ENSMOCG00000006763Pabpc410097.892ENSPPRG00000024727PABPC410097.892Panthera_pardus
ENSMOCG00000006763Pabpc410097.892ENSPTIG00000005829PABPC410097.892Panthera_tigris_altaica
ENSMOCG00000006763Pabpc410097.741ENSPTRG00000000573PABPC410097.741Pan_troglodytes
ENSMOCG00000006763Pabpc410098.042ENSPANG00000009484PABPC410098.042Papio_anubis
ENSMOCG00000006763Pabpc49984.169ENSPKIG00000025356pabpc49885.974Paramormyrops_kingsleyae
ENSMOCG00000006763Pabpc49990.952ENSPSIG00000016892PABPC49991.520Pelodiscus_sinensis
ENSMOCG00000006763Pabpc410083.200ENSPMGG00000009073pabpc49883.117Periophthalmus_magnuspinnatus
ENSMOCG00000006763Pabpc49998.336ENSPEMG00000023569-10098.336Peromyscus_maniculatus_bairdii
ENSMOCG00000006763Pabpc49991.831ENSPEMG00000024193-10091.831Peromyscus_maniculatus_bairdii
ENSMOCG00000006763Pabpc49672.479ENSPMAG00000007885pabpc49972.428Petromyzon_marinus
ENSMOCG00000006763Pabpc48873.830ENSPMAG00000002836pabpc410073.711Petromyzon_marinus
ENSMOCG00000006763Pabpc49793.795ENSPCIG00000020674PABPC49993.571Phascolarctos_cinereus
ENSMOCG00000006763Pabpc49982.316ENSPFOG00000002682pabpc49884.168Poecilia_formosa
ENSMOCG00000006763Pabpc49982.160ENSPLAG00000010112pabpc49884.006Poecilia_latipinna
ENSMOCG00000006763Pabpc49883.148ENSPMEG00000019739pabpc49884.168Poecilia_mexicana
ENSMOCG00000006763Pabpc410083.447ENSPREG00000001589pabpc49884.006Poecilia_reticulata
ENSMOCG00000006763Pabpc410097.741ENSPPYG00000001506PABPC410097.741Pongo_abelii
ENSMOCG00000006763Pabpc410092.771ENSPCAG00000003341PABPC49993.415Procavia_capensis
ENSMOCG00000006763Pabpc410097.744ENSPCOG00000023725-10097.744Propithecus_coquereli
ENSMOCG00000006763Pabpc49980.101ENSPCOG00000025882-9493.617Propithecus_coquereli
ENSMOCG00000006763Pabpc49996.995ENSPVAG00000002187PABPC410096.995Pteropus_vampyrus
ENSMOCG00000006763Pabpc410083.438ENSPNYG00000006134pabpc410083.968Pundamilia_nyererei
ENSMOCG00000006763Pabpc49983.412ENSPNAG00000024355pabpc49983.520Pygocentrus_nattereri
ENSMOCG00000006763Pabpc49993.182ENSRNOG00000028592AABR07035074.19993.731Rattus_norvegicus
ENSMOCG00000006763Pabpc49995.303ENSRNOG00000015642Pabpc410095.303Rattus_norvegicus
ENSMOCG00000006763Pabpc410097.892ENSRBIG00000039761PABPC410097.892Rhinopithecus_bieti
ENSMOCG00000006763Pabpc410097.892ENSRROG00000033355PABPC410097.892Rhinopithecus_roxellana
ENSMOCG00000006763Pabpc410097.741ENSSBOG00000026193PABPC410097.741Saimiri_boliviensis_boliviensis
ENSMOCG00000006763Pabpc49791.909ENSSHAG00000018139PABPC49991.680Sarcophilus_harrisii
ENSMOCG00000006763Pabpc49985.528ENSSFOG00015023514pabpc410084.455Scleropages_formosus
ENSMOCG00000006763Pabpc410082.484ENSSMAG00000009007pabpc410082.962Scophthalmus_maximus
ENSMOCG00000006763Pabpc49883.657ENSSDUG00000012683pabpc410083.758Seriola_dumerili
ENSMOCG00000006763Pabpc49883.657ENSSLDG00000013025pabpc410083.758Seriola_lalandi_dorsalis
ENSMOCG00000006763Pabpc410090.361ENSSARG00000000310PABPC49990.965Sorex_araneus
ENSMOCG00000006763Pabpc49989.524ENSSPUG00000003204PABPC49990.080Sphenodon_punctatus
ENSMOCG00000006763Pabpc49883.819ENSSPAG00000009252pabpc410090.807Stegastes_partitus
ENSMOCG00000006763Pabpc48949.414ENSSSCG00000036170-9449.660Sus_scrofa
ENSMOCG00000006763Pabpc410097.892ENSSSCG00000003660-10097.892Sus_scrofa
ENSMOCG00000006763Pabpc49986.838ENSTGUG00000001266PABPC49987.348Taeniopygia_guttata
ENSMOCG00000006763Pabpc410082.484ENSTRUG00000005907pabpc410083.016Takifugu_rubripes
ENSMOCG00000006763Pabpc410079.294ENSTNIG00000016902pabpc410079.294Tetraodon_nigroviridis
ENSMOCG00000006763Pabpc49986.477ENSTBEG00000009035PABPC49987.075Tupaia_belangeri
ENSMOCG00000006763Pabpc49982.319ENSTTRG00000014340PABPC49986.735Tursiops_truncatus
ENSMOCG00000006763Pabpc410097.638ENSUAMG00000000303PABPC410097.638Ursus_americanus
ENSMOCG00000006763Pabpc410097.590ENSUMAG00000019585PABPC410097.590Ursus_maritimus
ENSMOCG00000006763Pabpc47996.454ENSVPAG00000010041PABPC47396.454Vicugna_pacos
ENSMOCG00000006763Pabpc410097.795ENSVVUG00000005215PABPC410097.795Vulpes_vulpes
ENSMOCG00000006763Pabpc49983.016ENSXETG00000010946pabpc49983.654Xenopus_tropicalis
ENSMOCG00000006763Pabpc46297.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSMOCG00000006763Pabpc49989.610ENSXCOG00000013190pabpc49690.566Xiphophorus_couchianus
ENSMOCG00000006763Pabpc410082.812ENSXMAG00000019007pabpc49883.845Xiphophorus_maculatus

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