EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000006946 (Gene tree)
Gene ID: -
Gene Symbol: Zfp53
Alias: -
Full Name: zinc finger protein 53
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 12017 bases
Position: chrJH996560.1:425220-437236
Accession: 99200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	1	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	2	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	3	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	4	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	5	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	6	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	7	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	8	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	9	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	10	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	11	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	12	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	13	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	14	15
ENSMOCP00000007174	zf-C2H2	PF00096.26	1.9e-79	15	15
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	1	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	2	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	3	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	4	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	5	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	6	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	7	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	8	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	9	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	10	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	11	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	12	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	13	14
ENSMOCP00000007183	zf-C2H2	PF00096.26	1.2e-73	14	14
ENSMOCP00000007174	zf-met	PF12874.7	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000008998	-	1752	-	ENSMOCP00000007183	584 (aa)	-	-
ENSMOCT00000008987	-	1890	-	ENSMOCP00000007174	629 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000006946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000006946	Zfp53	98	47.440	ENSMOCG00000002167	Zfp712	99	47.993
ENSMOCG00000006946	Zfp53	89	39.571	ENSMOCG00000005017	Zbtb17	72	39.720
ENSMOCG00000006946	Zfp53	68	46.939	ENSMOCG00000018245	Sall4	51	34.848
ENSMOCG00000006946	Zfp53	97	47.436	ENSMOCG00000017860	Zkscan3	61	47.436
ENSMOCG00000006946	Zfp53	96	43.038	ENSMOCG00000020165	Zfp101	98	43.038
ENSMOCG00000006946	Zfp53	78	38.776	ENSMOCG00000006622	Snai2	55	38.776
ENSMOCG00000006946	Zfp53	97	47.222	ENSMOCG00000017799	-	99	48.046
ENSMOCG00000006946	Zfp53	97	48.571	ENSMOCG00000021383	Zfp251	94	47.176
ENSMOCG00000006946	Zfp53	66	40.909	ENSMOCG00000014488	Patz1	58	31.429
ENSMOCG00000006946	Zfp53	95	43.243	ENSMOCG00000014774	Zfp961	97	43.243
ENSMOCG00000006946	Zfp53	99	41.055	ENSMOCG00000007908	Zfp560	95	36.338
ENSMOCG00000006946	Zfp53	88	42.735	ENSMOCG00000016268	Zfp574	94	42.735
ENSMOCG00000006946	Zfp53	98	41.705	ENSMOCG00000007791	-	98	40.887
ENSMOCG00000006946	Zfp53	98	48.603	ENSMOCG00000000365	-	94	49.799
ENSMOCG00000006946	Zfp53	79	43.284	ENSMOCG00000004478	-	100	43.182
ENSMOCG00000006946	Zfp53	90	33.649	ENSMOCG00000009299	Zfp784	84	34.715
ENSMOCG00000006946	Zfp53	68	39.773	ENSMOCG00000017816	Gzf1	50	37.942
ENSMOCG00000006946	Zfp53	80	42.647	ENSMOCG00000022870	Zfp236	71	40.187
ENSMOCG00000006946	Zfp53	95	53.043	ENSMOCG00000001762	-	99	45.315
ENSMOCG00000006946	Zfp53	89	48.201	ENSMOCG00000002904	Zfp768	55	48.214
ENSMOCG00000006946	Zfp53	92	39.000	ENSMOCG00000016267	Prdm5	76	40.476
ENSMOCG00000006946	Zfp53	97	44.904	ENSMOCG00000017127	-	99	46.178
ENSMOCG00000006946	Zfp53	96	54.986	ENSMOCG00000007851	-	99	51.140
ENSMOCG00000006946	Zfp53	97	39.512	ENSMOCG00000000804	Zfp317	89	40.803
ENSMOCG00000006946	Zfp53	79	42.982	ENSMOCG00000006225	Wt1	60	42.982
ENSMOCG00000006946	Zfp53	95	34.715	ENSMOCG00000009006	Zfp212	69	35.795
ENSMOCG00000006946	Zfp53	87	37.224	ENSMOCG00000021124	Repin1	92	35.308
ENSMOCG00000006946	Zfp53	98	34.615	ENSMOCG00000005503	Zfp319	93	34.694
ENSMOCG00000006946	Zfp53	87	45.729	ENSMOCG00000020296	Zfp628	60	45.098
ENSMOCG00000006946	Zfp53	98	45.614	ENSMOCG00000015724	Zfp26	98	45.614
ENSMOCG00000006946	Zfp53	97	45.897	ENSMOCG00000017961	Zfp39	94	45.897
ENSMOCG00000006946	Zfp53	96	54.751	ENSMOCG00000015466	Zfp13	74	54.751
ENSMOCG00000006946	Zfp53	69	42.391	ENSMOCG00000002689	Zfp423	90	30.964
ENSMOCG00000006946	Zfp53	96	47.561	ENSMOCG00000003394	-	72	47.561
ENSMOCG00000006946	Zfp53	68	34.021	ENSMOCG00000001873	Zbtb41	50	34.545
ENSMOCG00000006946	Zfp53	81	37.321	ENSMOCG00000004895	Zfp64	72	34.509
ENSMOCG00000006946	Zfp53	97	51.653	ENSMOCG00000002761	Zfp1	100	51.653
ENSMOCG00000006946	Zfp53	98	46.175	ENSMOCG00000003692	Zfp354a	98	45.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006946	Zfp53	87	56.828	ENSCING00000003470	-	94	56.828	Ciona_intestinalis
ENSMOCG00000006946	Zfp53	79	53.608	ENSCING00000018801	zf(c2h2)-138	97	53.608	Ciona_intestinalis
ENSMOCG00000006946	Zfp53	88	47.036	ENSCSAVG00000010156	-	96	47.036	Ciona_savignyi
ENSMOCG00000006946	Zfp53	97	51.420	ENSCGRG00001007163	-	100	50.785	Cricetulus_griseus_chok1gshd
ENSMOCG00000006946	Zfp53	87	63.430	ENSCGRG00001013602	-	99	63.430	Cricetulus_griseus_chok1gshd
ENSMOCG00000006946	Zfp53	91	56.742	ENSCGRG00001002297	-	99	57.014	Cricetulus_griseus_chok1gshd
ENSMOCG00000006946	Zfp53	99	84.551	ENSCGRG00000018332	Zfp53	93	87.248	Cricetulus_griseus_crigri
ENSMOCG00000006946	Zfp53	97	52.128	ENSCGRG00000000778	-	97	53.788	Cricetulus_griseus_crigri
ENSMOCG00000006946	Zfp53	89	42.518	ENSEBUG00000012454	-	94	41.096	Eptatretus_burgeri
ENSMOCG00000006946	Zfp53	96	47.103	ENSEBUG00000012823	-	97	47.103	Eptatretus_burgeri
ENSMOCG00000006946	Zfp53	89	42.264	ENSEBUG00000008792	-	93	42.264	Eptatretus_burgeri
ENSMOCG00000006946	Zfp53	88	45.854	ENSEBUG00000016878	-	93	46.683	Eptatretus_burgeri
ENSMOCG00000006946	Zfp53	97	47.246	ENSEBUG00000005655	-	90	47.246	Eptatretus_burgeri
ENSMOCG00000006946	Zfp53	86	39.450	ENSEBUG00000001525	-	88	40.712	Eptatretus_burgeri
ENSMOCG00000006946	Zfp53	99	66.610	ENSMAUG00000005974	-	99	64.521	Mesocricetus_auratus
ENSMOCG00000006946	Zfp53	99	65.589	ENSMAUG00000004844	-	100	65.589	Mesocricetus_auratus
ENSMOCG00000006946	Zfp53	99	55.128	ENSMAUG00000000939	-	97	55.128	Mesocricetus_auratus
ENSMOCG00000006946	Zfp53	98	61.194	MGP_CAROLIEiJ_G0021132	Zfp948	98	63.744	Mus_caroli
ENSMOCG00000006946	Zfp53	98	61.739	ENSMUSG00000062743	Zfp677	99	61.739	Mus_musculus
ENSMOCG00000006946	Zfp53	88	44.164	ENSPSIG00000009270	-	71	44.164	Pelodiscus_sinensis
ENSMOCG00000006946	Zfp53	98	46.854	ENSPEMG00000007241	-	99	48.596	Peromyscus_maniculatus_bairdii
ENSMOCG00000006946	Zfp53	98	47.627	ENSPEMG00000023883	-	100	48.382	Peromyscus_maniculatus_bairdii
ENSMOCG00000006946	Zfp53	96	62.000	ENSRNOG00000052406	LOC102552527	99	62.000	Rattus_norvegicus