EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000006997 (Gene tree)
Gene ID
101999855
Gene Symbol
Rbms3
Alias
6720477E09Rik|8430436O14Rik
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Minus strand
Length
1051515 bases
Position
chr5:88559412-89610926
Accession
101999855
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000007264RRM_1PF00076.227.3e-3212
ENSMOCP00000007264RRM_1PF00076.227.3e-3222
ENSMOCP00000007282RRM_1PF00076.228e-3212
ENSMOCP00000007282RRM_1PF00076.228e-3222
ENSMOCP00000007279RRM_1PF00076.228.9e-3212
ENSMOCP00000007279RRM_1PF00076.228.9e-3222
ENSMOCP00000007278RRM_1PF00076.221e-3112
ENSMOCP00000007278RRM_1PF00076.221e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000009130-1290XM_005348055ENSMOCP00000007279429 (aa)XP_005348112UPI00038BC713
ENSMOCT00000009111-1203-ENSMOCP00000007264400 (aa)-UPI00038C3580
ENSMOCT00000009134-1242XM_005348059ENSMOCP00000007282413 (aa)XP_005348116UPI00038C56E6
ENSMOCT00000009128-1386-ENSMOCP00000007278461 (aa)--
ENSMOCT00000009116-558-ENSMOCP00000007268185 (aa)--
Gene Model
Click here to download ENSMOCG00000006997's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006997's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000006997Rbms35235.227ENSMOCG00000014588Elavl17136.667
ENSMOCG00000006997Rbms35335.484ENSMOCG00000016960Elavl26537.766
ENSMOCG00000006997Rbms39970.047ENSMOCG00000022617Rbms110068.085
ENSMOCG00000006997Rbms39463.889ENSMOCG00000015140Rbms28766.667
ENSMOCG00000006997Rbms35134.951ENSMOCG00000001878Celf38739.474
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000006997Rbms310093.824ENSG00000144642RBMS310096.591Homo_sapiens
ENSMOCG00000006997Rbms39972.391ENSAPOG00000007266rbms39379.221Acanthochromis_polyacanthus
ENSMOCG00000006997Rbms39986.265ENSAPOG00000003432-9986.265Acanthochromis_polyacanthus
ENSMOCG00000006997Rbms37094.719ENSAMEG00000005947RBMS310094.719Ailuropoda_melanoleuca
ENSMOCG00000006997Rbms38184.969ENSACIG00000006987-8190.203Amphilophus_citrinellus
ENSMOCG00000006997Rbms38872.087ENSACIG00000021113RBMS39671.003Amphilophus_citrinellus
ENSMOCG00000006997Rbms39977.622ENSAOCG00000021274rbms310076.457Amphiprion_ocellaris
ENSMOCG00000006997Rbms39585.714ENSAOCG00000024104-9981.007Amphiprion_ocellaris
ENSMOCG00000006997Rbms38875.815ENSAPEG00000016299rbms38683.129Amphiprion_percula
ENSMOCG00000006997Rbms39981.752ENSAPEG00000009481-9981.752Amphiprion_percula
ENSMOCG00000006997Rbms39978.220ENSATEG00000024295rbms310077.283Anabas_testudineus
ENSMOCG00000006997Rbms39986.024ENSATEG00000008433-9986.024Anabas_testudineus
ENSMOCG00000006997Rbms39987.471ENSAPLG00000012270RBMS310086.775Anas_platyrhynchos
ENSMOCG00000006997Rbms39989.976ENSACAG00000028664RBMS39988.305Anolis_carolinensis
ENSMOCG00000006997Rbms310093.822ENSANAG00000021899RBMS310091.762Aotus_nancymaae
ENSMOCG00000006997Rbms39977.700ENSACLG00000018506rbms310076.761Astatotilapia_calliptera
ENSMOCG00000006997Rbms39585.965ENSACLG00000008976-9481.050Astatotilapia_calliptera
ENSMOCG00000006997Rbms39984.211ENSAMXG00000020388rbms310083.014Astyanax_mexicanus
ENSMOCG00000006997Rbms36483.012ENSAMXG00000043770-10081.467Astyanax_mexicanus
ENSMOCG00000006997Rbms39992.890ENSBTAG00000044062RBMS310090.826Bos_taurus
ENSMOCG00000006997Rbms310093.822ENSCJAG00000004312RBMS310091.533Callithrix_jacchus
ENSMOCG00000006997Rbms310093.822ENSCAFG00000005464RBMS310091.762Canis_familiaris
ENSMOCG00000006997Rbms39993.807ENSCAFG00020024980RBMS310091.743Canis_lupus_dingo
ENSMOCG00000006997Rbms310092.906ENSCHIG00000009144RBMS310090.847Capra_hircus
ENSMOCG00000006997Rbms37895.210ENSTSYG00000002615RBMS310096.215Carlito_syrichta
ENSMOCG00000006997Rbms39688.315ENSCAPG00000017783RBMS310087.640Cavia_aperea
ENSMOCG00000006997Rbms310094.471ENSCPOG00000006457RBMS310093.750Cavia_porcellus
ENSMOCG00000006997Rbms310093.822ENSCCAG00000008671RBMS310091.533Cebus_capucinus
ENSMOCG00000006997Rbms310093.822ENSCATG00000013222RBMS310091.533Cercocebus_atys
ENSMOCG00000006997Rbms310093.824ENSCLAG00000005866RBMS310091.762Chinchilla_lanigera
ENSMOCG00000006997Rbms36594.465ENSCSAG00000009655RBMS310094.465Chlorocebus_sabaeus
ENSMOCG00000006997Rbms38895.763ENSCHOG00000000758RBMS38795.763Choloepus_hoffmanni
ENSMOCG00000006997Rbms39990.215ENSCPBG00000022678RBMS39988.544Chrysemys_picta_bellii
ENSMOCG00000006997Rbms310094.050ENSCANG00000032137RBMS310091.762Colobus_angolensis_palliatus
ENSMOCG00000006997Rbms310098.840ENSCGRG00001007243Rbms310098.840Cricetulus_griseus_chok1gshd
ENSMOCG00000006997Rbms310098.840ENSCGRG00000004599Rbms310098.840Cricetulus_griseus_crigri
ENSMOCG00000006997Rbms39985.407ENSCSEG00000014677-9591.803Cynoglossus_semilaevis
ENSMOCG00000006997Rbms39977.336ENSCSEG00000010011RBMS310077.103Cynoglossus_semilaevis
ENSMOCG00000006997Rbms39985.337ENSCVAG00000022814-9686.649Cyprinodon_variegatus
ENSMOCG00000006997Rbms39978.251ENSCVAG00000022354rbms310077.069Cyprinodon_variegatus
ENSMOCG00000006997Rbms39985.577ENSDARG00000044574rbms310095.139Danio_rerio
ENSMOCG00000006997Rbms310094.050ENSDNOG00000016645RBMS310091.762Dasypus_novemcinctus
ENSMOCG00000006997Rbms310093.135ENSDORG00000007220Rbms310091.076Dipodomys_ordii
ENSMOCG00000006997Rbms38787.500ENSETEG00000009485-8687.500Echinops_telfairi
ENSMOCG00000006997Rbms37054.448ENSEBUG00000005830rbms38356.809Eptatretus_burgeri
ENSMOCG00000006997Rbms310093.824ENSEASG00005006152RBMS310091.449Equus_asinus_asinus
ENSMOCG00000006997Rbms310093.824ENSECAG00000017871RBMS310091.533Equus_caballus
ENSMOCG00000006997Rbms39686.514ENSEEUG00000014337RBMS310083.969Erinaceus_europaeus
ENSMOCG00000006997Rbms39977.700ENSELUG00000002862rbms310077.230Esox_lucius
ENSMOCG00000006997Rbms39981.683ENSELUG00000006905-9889.344Esox_lucius
ENSMOCG00000006997Rbms310093.364ENSFCAG00000002130RBMS310091.304Felis_catus
ENSMOCG00000006997Rbms39990.453ENSFALG00000009165RBMS39988.783Ficedula_albicollis
ENSMOCG00000006997Rbms310093.364ENSFDAG00000008278RBMS310091.304Fukomys_damarensis
ENSMOCG00000006997Rbms39667.407ENSFHEG00000004787RBMS39569.919Fundulus_heteroclitus
ENSMOCG00000006997Rbms39079.345ENSGMOG00000002600-9380.155Gadus_morhua
ENSMOCG00000006997Rbms39990.453ENSGALG00000011439RBMS39988.783Gallus_gallus
ENSMOCG00000006997Rbms39978.538ENSGAFG00000000168rbms310077.358Gambusia_affinis
ENSMOCG00000006997Rbms39986.058ENSGAFG00000003329-9986.058Gambusia_affinis
ENSMOCG00000006997Rbms36590.037ENSGAGG00000004039RBMS310090.037Gopherus_agassizii
ENSMOCG00000006997Rbms310093.822ENSGGOG00000007228RBMS310091.533Gorilla_gorilla
ENSMOCG00000006997Rbms310083.982ENSHBUG00000019785-9683.982Haplochromis_burtoni
ENSMOCG00000006997Rbms36583.704ENSHBUG00000021196rbms39483.704Haplochromis_burtoni
ENSMOCG00000006997Rbms310093.593ENSHGLG00000002170RBMS310091.533Heterocephalus_glaber_female
ENSMOCG00000006997Rbms310093.593ENSHGLG00100014278RBMS310091.533Heterocephalus_glaber_male
ENSMOCG00000006997Rbms39985.577ENSHCOG00000007894-9985.577Hippocampus_comes
ENSMOCG00000006997Rbms39984.211ENSIPUG00000017680rbms310083.014Ictalurus_punctatus
ENSMOCG00000006997Rbms310094.062ENSSTOG00000006324RBMS310091.762Ictidomys_tridecemlineatus
ENSMOCG00000006997Rbms310091.743ENSJJAG00000014708Rbms310090.138Jaculus_jaculus
ENSMOCG00000006997Rbms39986.024ENSKMAG00000012586-9986.024Kryptolebias_marmoratus
ENSMOCG00000006997Rbms39977.209ENSKMAG00000020500rbms310077.209Kryptolebias_marmoratus
ENSMOCG00000006997Rbms39985.507ENSLBEG00000027388-9985.507Labrus_bergylta
ENSMOCG00000006997Rbms36667.143ENSLBEG00000006677rbms39671.815Labrus_bergylta
ENSMOCG00000006997Rbms39989.952ENSLACG00000010581RBMS310088.278Latimeria_chalumnae
ENSMOCG00000006997Rbms37085.666ENSLOCG00000002328rbms310085.666Lepisosteus_oculatus
ENSMOCG00000006997Rbms39993.578ENSLAFG00000000354RBMS310091.514Loxodonta_africana
ENSMOCG00000006997Rbms310094.062ENSMFAG00000033300RBMS310091.762Macaca_fascicularis
ENSMOCG00000006997Rbms310094.062ENSMMUG00000004404RBMS310091.686Macaca_mulatta
ENSMOCG00000006997Rbms310094.050ENSMNEG00000035839RBMS310091.762Macaca_nemestrina
ENSMOCG00000006997Rbms310093.822ENSMLEG00000029464RBMS310091.533Mandrillus_leucophaeus
ENSMOCG00000006997Rbms39684.655ENSMAMG00000002176-8388.267Mastacembelus_armatus
ENSMOCG00000006997Rbms39978.505ENSMAMG00000024043rbms310077.570Mastacembelus_armatus
ENSMOCG00000006997Rbms39977.700ENSMZEG00005006308rbms310076.761Maylandia_zebra
ENSMOCG00000006997Rbms310084.028ENSMZEG00005026469-9684.138Maylandia_zebra
ENSMOCG00000006997Rbms310098.840ENSMAUG00000016436Rbms310098.840Mesocricetus_auratus
ENSMOCG00000006997Rbms310093.593ENSMICG00000049249RBMS310091.304Microcebus_murinus
ENSMOCG00000006997Rbms39986.131ENSMMOG00000015071-9986.131Mola_mola
ENSMOCG00000006997Rbms39174.801ENSMMOG00000008471RBMS38884.049Mola_mola
ENSMOCG00000006997Rbms39983.632ENSMODG00000015125RBMS39983.408Monodelphis_domestica
ENSMOCG00000006997Rbms39986.024ENSMALG00000009155-9986.024Monopterus_albus
ENSMOCG00000006997Rbms39978.037ENSMALG00000019536RBMS310077.103Monopterus_albus
ENSMOCG00000006997Rbms310097.216MGP_CAROLIEiJ_G0032783Rbms310097.585Mus_caroli
ENSMOCG00000006997Rbms310097.680ENSMUSG00000039607Rbms310098.551Mus_musculus
ENSMOCG00000006997Rbms310097.454MGP_PahariEiJ_G0015650Rbms310098.551Mus_pahari
ENSMOCG00000006997Rbms310097.680MGP_SPRETEiJ_G0033930Rbms310098.551Mus_spretus
ENSMOCG00000006997Rbms39993.578ENSMPUG00000011956RBMS310091.514Mustela_putorius_furo
ENSMOCG00000006997Rbms39993.571ENSMLUG00000000659RBMS310091.429Myotis_lucifugus
ENSMOCG00000006997Rbms310096.767ENSNGAG00000014039Rbms310096.767Nannospalax_galili
ENSMOCG00000006997Rbms39986.265ENSNBRG00000018065-9986.265Neolamprologus_brichardi
ENSMOCG00000006997Rbms310093.822ENSNLEG00000004129RBMS310091.533Nomascus_leucogenys
ENSMOCG00000006997Rbms39980.505ENSMEUG00000004772RBMS310077.982Notamacropus_eugenii
ENSMOCG00000006997Rbms39993.563ENSOPRG00000006808RBMS38591.264Ochotona_princeps
ENSMOCG00000006997Rbms310093.824ENSODEG00000003651RBMS310091.762Octodon_degus
ENSMOCG00000006997Rbms39973.585ENSONIG00000007172rbms310072.642Oreochromis_niloticus
ENSMOCG00000006997Rbms39988.303ENSOANG00000010529RBMS39986.009Ornithorhynchus_anatinus
ENSMOCG00000006997Rbms310092.906ENSOCUG00000004840RBMS310090.389Oryctolagus_cuniculus
ENSMOCG00000006997Rbms39986.506ENSORLG00000002306-9986.506Oryzias_latipes
ENSMOCG00000006997Rbms39978.487ENSORLG00000005370RBMS310077.305Oryzias_latipes
ENSMOCG00000006997Rbms39978.014ENSORLG00020022674RBMS310076.832Oryzias_latipes_hni
ENSMOCG00000006997Rbms39986.265ENSORLG00020008496-9986.265Oryzias_latipes_hni
ENSMOCG00000006997Rbms39978.487ENSORLG00015005509rbms310077.305Oryzias_latipes_hsok
ENSMOCG00000006997Rbms39986.265ENSORLG00015015719-9986.265Oryzias_latipes_hsok
ENSMOCG00000006997Rbms39186.614ENSOMEG00000007677-9686.885Oryzias_melastigma
ENSMOCG00000006997Rbms39979.196ENSOMEG00000014805RBMS310078.014Oryzias_melastigma
ENSMOCG00000006997Rbms310093.364ENSOARG00000014684RBMS310091.304Ovis_aries
ENSMOCG00000006997Rbms310093.822ENSPPAG00000036519RBMS310091.533Pan_paniscus
ENSMOCG00000006997Rbms310093.135ENSPPRG00000002761RBMS310091.076Panthera_pardus
ENSMOCG00000006997Rbms310093.135ENSPTIG00000011568RBMS310091.076Panthera_tigris_altaica
ENSMOCG00000006997Rbms310093.824ENSPTRG00000014709RBMS310091.533Pan_troglodytes
ENSMOCG00000006997Rbms310093.822ENSPANG00000010234RBMS310088.684Papio_anubis
ENSMOCG00000006997Rbms35291.905ENSPKIG00000016025-7489.524Paramormyrops_kingsleyae
ENSMOCG00000006997Rbms36489.105ENSPKIG00000007989-10089.105Paramormyrops_kingsleyae
ENSMOCG00000006997Rbms39989.737ENSPSIG00000005269RBMS39988.067Pelodiscus_sinensis
ENSMOCG00000006997Rbms39187.139ENSPMGG00000021683-9687.432Periophthalmus_magnuspinnatus
ENSMOCG00000006997Rbms38876.099ENSPMGG00000021544rbms38582.515Periophthalmus_magnuspinnatus
ENSMOCG00000006997Rbms39995.338ENSPEMG00000001117Rbms310095.338Peromyscus_maniculatus_bairdii
ENSMOCG00000006997Rbms38790.678ENSPCIG00000006106RBMS39087.037Phascolarctos_cinereus
ENSMOCG00000006997Rbms39978.302ENSPFOG00000017887rbms310077.123Poecilia_formosa
ENSMOCG00000006997Rbms37778.816ENSPLAG00000016866-8377.570Poecilia_latipinna
ENSMOCG00000006997Rbms39986.298ENSPMEG00000002993-9986.298Poecilia_mexicana
ENSMOCG00000006997Rbms39976.905ENSPREG00000011880rbms39975.714Poecilia_reticulata
ENSMOCG00000006997Rbms38986.400ENSPREG00000018221-9888.281Poecilia_reticulata
ENSMOCG00000006997Rbms310080.320ENSPPYG00000014050RBMS38378.032Pongo_abelii
ENSMOCG00000006997Rbms310070.252ENSPCAG00000006307RBMS310068.192Procavia_capensis
ENSMOCG00000006997Rbms39993.563ENSPCOG00000017136RBMS310091.264Propithecus_coquereli
ENSMOCG00000006997Rbms310083.753ENSPVAG00000014037RBMS310083.753Pteropus_vampyrus
ENSMOCG00000006997Rbms39986.506ENSPNYG00000012624-9986.506Pundamilia_nyererei
ENSMOCG00000006997Rbms39977.700ENSPNYG00000010546rbms310076.761Pundamilia_nyererei
ENSMOCG00000006997Rbms39983.971ENSPNAG00000001800rbms310082.775Pygocentrus_nattereri
ENSMOCG00000006997Rbms39997.674ENSRNOG00000025881Rbms310097.674Rattus_norvegicus
ENSMOCG00000006997Rbms310094.050ENSRBIG00000035863RBMS310091.762Rhinopithecus_bieti
ENSMOCG00000006997Rbms39494.660ENSRROG00000027512RBMS310095.431Rhinopithecus_roxellana
ENSMOCG00000006997Rbms310093.822ENSSBOG00000020232RBMS310091.533Saimiri_boliviensis_boliviensis
ENSMOCG00000006997Rbms38886.301ENSSHAG00000002411RBMS39486.301Sarcophilus_harrisii
ENSMOCG00000006997Rbms39984.746ENSSFOG00015008578rbms39983.051Scleropages_formosus
ENSMOCG00000006997Rbms39974.126ENSSMAG00000004997rbms39977.507Scophthalmus_maximus
ENSMOCG00000006997Rbms39684.399ENSSMAG00000020065-9388.000Scophthalmus_maximus
ENSMOCG00000006997Rbms39986.265ENSSDUG00000019287-9986.265Seriola_dumerili
ENSMOCG00000006997Rbms39978.037ENSSDUG00000013656RBMS310077.103Seriola_dumerili
ENSMOCG00000006997Rbms39986.265ENSSLDG00000013224-9986.265Seriola_lalandi_dorsalis
ENSMOCG00000006997Rbms39977.726ENSSLDG00000020276RBMS310076.798Seriola_lalandi_dorsalis
ENSMOCG00000006997Rbms39082.609ENSSARG00000000695RBMS310082.609Sorex_araneus
ENSMOCG00000006997Rbms36989.041ENSSPUG00000017197RBMS39887.879Sphenodon_punctatus
ENSMOCG00000006997Rbms39977.156ENSSPAG00000020693rbms310076.457Stegastes_partitus
ENSMOCG00000006997Rbms39585.714ENSSPAG00000003983-9980.645Stegastes_partitus
ENSMOCG00000006997Rbms310093.364ENSSSCG00000036381RBMS310091.304Sus_scrofa
ENSMOCG00000006997Rbms37888.623ENSTGUG00000003572RBMS310088.623Taeniopygia_guttata
ENSMOCG00000006997Rbms39977.570ENSTRUG00000021719RBMS310076.869Takifugu_rubripes
ENSMOCG00000006997Rbms39976.555ENSTRUG00000007482-9976.683Takifugu_rubripes
ENSMOCG00000006997Rbms38592.035ENSTBEG00000005362RBMS310090.761Tupaia_belangeri
ENSMOCG00000006997Rbms39993.103ENSTTRG00000006202RBMS310091.034Tursiops_truncatus
ENSMOCG00000006997Rbms310093.822ENSUMAG00000000263RBMS310091.762Ursus_maritimus
ENSMOCG00000006997Rbms38984.073ENSVPAG00000003842RBMS39382.768Vicugna_pacos
ENSMOCG00000006997Rbms38995.812ENSVVUG00000004660RBMS39996.957Vulpes_vulpes
ENSMOCG00000006997Rbms37184.039ENSXETG00000032055RBMS39984.039Xenopus_tropicalis
ENSMOCG00000006997Rbms39171.907ENSXCOG00000019600-9571.582Xiphophorus_couchianus
ENSMOCG00000006997Rbms39986.058ENSXMAG00000014382-9986.058Xiphophorus_maculatus
ENSMOCG00000006997Rbms39976.706ENSXMAG00000021783rbms310075.529Xiphophorus_maculatus

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