EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000007908 (Gene tree)
Gene ID: 101988597
Gene Symbol: Zfp560
Alias: 2310030G09Rik
Full Name: zinc finger protein 260-like
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 7299 bases
Position: chr5:14422991-14430289
Accession: 101988597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	1	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	2	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	3	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	4	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	5	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	6	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	7	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	8	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	9	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	10	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	11	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	12	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	13	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	14	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	15	16
ENSMOCP00000008001	zf-C2H2	PF00096.26	1.7e-92	16	16
ENSMOCP00000008001	zf-met	PF12874.7	8.9e-11	1	2
ENSMOCP00000008001	zf-met	PF12874.7	8.9e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010195	-	2202	XM_013346145	ENSMOCP00000008001	733 (aa)	XP_013201599	-

Gene Model

Click here to download ENSMOCG00000007908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000007908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000007908	Zfp560	73	52.402	ENSMOCG00000017860	Zkscan3	54	52.402
ENSMOCG00000007908	Zfp560	65	36.932	ENSMOCG00000009299	Zfp784	73	36.898
ENSMOCG00000007908	Zfp560	65	47.619	ENSMOCG00000007847	Snai1	51	46.729
ENSMOCG00000007908	Zfp560	89	51.597	ENSMOCG00000021383	Zfp251	93	51.597
ENSMOCG00000007908	Zfp560	88	48.930	ENSMOCG00000007851	-	99	48.930
ENSMOCG00000007908	Zfp560	90	47.589	ENSMOCG00000003394	-	96	48.307
ENSMOCG00000007908	Zfp560	91	49.271	ENSMOCG00000001762	-	99	49.271
ENSMOCG00000007908	Zfp560	60	42.357	ENSMOCG00000005017	Zbtb17	59	37.831
ENSMOCG00000007908	Zfp560	66	37.107	ENSMOCG00000003611	Maz	66	32.804
ENSMOCG00000007908	Zfp560	63	45.588	ENSMOCG00000014488	Patz1	55	31.373
ENSMOCG00000007908	Zfp560	71	37.194	ENSMOCG00000021124	Repin1	90	37.194
ENSMOCG00000007908	Zfp560	89	54.667	ENSMOCG00000015466	Zfp13	78	53.333
ENSMOCG00000007908	Zfp560	90	49.624	ENSMOCG00000000804	Zfp317	90	47.558
ENSMOCG00000007908	Zfp560	68	47.778	ENSMOCG00000020948	Zbtb49	52	45.729
ENSMOCG00000007908	Zfp560	87	50.427	ENSMOCG00000017961	Zfp39	94	49.470
ENSMOCG00000007908	Zfp560	65	46.591	ENSMOCG00000006225	Wt1	53	45.378
ENSMOCG00000007908	Zfp560	65	37.526	ENSMOCG00000005503	Zfp319	93	37.526
ENSMOCG00000007908	Zfp560	90	44.444	ENSMOCG00000007791	-	98	44.351
ENSMOCG00000007908	Zfp560	95	36.338	ENSMOCG00000006946	Zfp53	99	41.055
ENSMOCG00000007908	Zfp560	64	52.414	ENSMOCG00000016267	Prdm5	68	52.414
ENSMOCG00000007908	Zfp560	90	57.645	ENSMOCG00000015724	Zfp26	99	57.645
ENSMOCG00000007908	Zfp560	67	41.850	ENSMOCG00000004895	Zfp64	75	39.326
ENSMOCG00000007908	Zfp560	65	36.667	ENSMOCG00000020296	Zfp628	62	35.714
ENSMOCG00000007908	Zfp560	66	44.030	ENSMOCG00000006622	Snai2	67	44.030
ENSMOCG00000007908	Zfp560	68	38.968	ENSMOCG00000016268	Zfp574	93	38.968
ENSMOCG00000007908	Zfp560	92	51.504	ENSMOCG00000000365	-	96	51.504
ENSMOCG00000007908	Zfp560	77	44.737	ENSMOCG00000022870	Zfp236	75	44.737
ENSMOCG00000007908	Zfp560	67	54.513	ENSMOCG00000002904	Zfp768	51	54.448
ENSMOCG00000007908	Zfp560	63	59.184	ENSMOCG00000018245	Sall4	53	59.184
ENSMOCG00000007908	Zfp560	67	48.889	ENSMOCG00000004478	-	100	46.667
ENSMOCG00000007908	Zfp560	74	60.870	ENSMOCG00000017799	-	80	60.870
ENSMOCG00000007908	Zfp560	70	42.667	ENSMOCG00000002689	Zfp423	83	42.667
ENSMOCG00000007908	Zfp560	89	47.050	ENSMOCG00000002167	Zfp712	93	47.050
ENSMOCG00000007908	Zfp560	91	51.575	ENSMOCG00000003692	Zfp354a	99	51.575
ENSMOCG00000007908	Zfp560	89	53.909	ENSMOCG00000002761	Zfp1	100	53.909
ENSMOCG00000007908	Zfp560	89	51.889	ENSMOCG00000020165	Zfp101	98	51.889
ENSMOCG00000007908	Zfp560	90	49.175	ENSMOCG00000014774	Zfp961	97	49.175
ENSMOCG00000007908	Zfp560	87	30.168	ENSMOCG00000009006	Zfp212	70	30.168
ENSMOCG00000007908	Zfp560	90	50.974	ENSMOCG00000017127	-	99	50.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000007908	Zfp560	84	85.303	ENSCPOG00000033345	-	100	85.303	Cavia_porcellus
ENSMOCG00000007908	Zfp560	100	74.904	ENSCGRG00001023858	Zfp560	100	77.834	Cricetulus_griseus_chok1gshd
ENSMOCG00000007908	Zfp560	100	74.904	ENSCGRG00000012088	Zfp560	100	77.834	Cricetulus_griseus_crigri
ENSMOCG00000007908	Zfp560	84	85.838	ENSFDAG00000008687	-	100	85.838	Fukomys_damarensis
ENSMOCG00000007908	Zfp560	84	85.838	ENSHGLG00000019054	-	100	85.838	Heterocephalus_glaber_female
ENSMOCG00000007908	Zfp560	89	71.134	ENSHGLG00100015134	-	99	70.538	Heterocephalus_glaber_male
ENSMOCG00000007908	Zfp560	89	70.641	ENSSTOG00000033893	-	99	70.057	Ictidomys_tridecemlineatus
ENSMOCG00000007908	Zfp560	100	73.565	ENSNGAG00000015897	Zfp560	100	73.874	Nannospalax_galili
ENSMOCG00000007908	Zfp560	84	85.797	ENSODEG00000017047	-	100	85.797	Octodon_degus
ENSMOCG00000007908	Zfp560	79	71.634	ENSOCUG00000029594	-	91	75.461	Oryctolagus_cuniculus
ENSMOCG00000007908	Zfp560	77	49.246	ENSOGAG00000025131	ZNF121	99	48.684	Otolemur_garnettii
ENSMOCG00000007908	Zfp560	85	75.587	ENSRNOG00000048394	Zfp560	100	76.762	Rattus_norvegicus