EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000007955 (Gene tree)
Gene ID: 101980761
Gene Symbol: Pabpn1l
Alias: LOC382035|ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 2956 bases
Position: chr4:30380040-30382995
Accession: 101980761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008044	RRM_1	PF00076.22	6.4e-16	1	1
ENSMOCP00000008042	RRM_1	PF00076.22	7.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010259	-	813	XM_005345804	ENSMOCP00000008044	270 (aa)	XP_005345861	-
ENSMOCT00000010257	-	858	-	ENSMOCP00000008042	285 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000007955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000007955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000007955	Pabpn1l	51	56.164	ENSMOCG00000018557	Gm20521	88	52.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000007955	Pabpn1l	100	67.025	ENSG00000205022	PABPN1L	100	67.025	Homo_sapiens
ENSMOCG00000007955	Pabpn1l	57	52.903	ENSAPOG00000000685	PABPN1L	58	49.215	Acanthochromis_polyacanthus
ENSMOCG00000007955	Pabpn1l	57	50.980	ENSACIG00000021400	PABPN1L	86	49.375	Amphilophus_citrinellus
ENSMOCG00000007955	Pabpn1l	57	53.595	ENSATEG00000011646	PABPN1L	70	48.649	Anabas_testudineus
ENSMOCG00000007955	Pabpn1l	72	56.122	ENSACAG00000013250	PABPN1L	100	56.122	Anolis_carolinensis
ENSMOCG00000007955	Pabpn1l	100	66.065	ENSANAG00000038178	PABPN1L	100	67.509	Aotus_nancymaae
ENSMOCG00000007955	Pabpn1l	57	50.980	ENSACLG00000025147	PABPN1L	72	44.949	Astatotilapia_calliptera
ENSMOCG00000007955	Pabpn1l	59	51.875	ENSAMXG00000010873	PABPN1L	62	52.727	Astyanax_mexicanus
ENSMOCG00000007955	Pabpn1l	51	74.820	ENSBTAG00000006727	-	85	74.820	Bos_taurus
ENSMOCG00000007955	Pabpn1l	100	62.724	ENSBTAG00000023752	-	100	63.082	Bos_taurus
ENSMOCG00000007955	Pabpn1l	100	63.768	ENSCJAG00000045284	PABPN1L	100	66.426	Callithrix_jacchus
ENSMOCG00000007955	Pabpn1l	100	61.806	ENSCHIG00000013987	PABPN1L	100	61.806	Capra_hircus
ENSMOCG00000007955	Pabpn1l	95	64.835	ENSCAPG00000007240	PABPN1L	99	65.789	Cavia_aperea
ENSMOCG00000007955	Pabpn1l	100	67.399	ENSCPOG00000025951	PABPN1L	100	67.766	Cavia_porcellus
ENSMOCG00000007955	Pabpn1l	100	65.217	ENSCCAG00000027631	PABPN1L	100	66.426	Cebus_capucinus
ENSMOCG00000007955	Pabpn1l	100	65.455	ENSCATG00000031060	PABPN1L	100	68.116	Cercocebus_atys
ENSMOCG00000007955	Pabpn1l	100	67.647	ENSCLAG00000000704	PABPN1L	100	67.647	Chinchilla_lanigera
ENSMOCG00000007955	Pabpn1l	100	64.384	ENSCSAG00000002881	PABPN1L	100	65.068	Chlorocebus_sabaeus
ENSMOCG00000007955	Pabpn1l	72	53.000	ENSCPBG00000023441	PABPN1L	62	54.412	Chrysemys_picta_bellii
ENSMOCG00000007955	Pabpn1l	100	64.130	ENSCANG00000039336	PABPN1L	100	66.426	Colobus_angolensis_palliatus
ENSMOCG00000007955	Pabpn1l	100	85.091	ENSCGRG00001013211	Pabpn1l	100	85.091	Cricetulus_griseus_chok1gshd
ENSMOCG00000007955	Pabpn1l	100	85.091	ENSCGRG00000015868	Pabpn1l	100	85.091	Cricetulus_griseus_crigri
ENSMOCG00000007955	Pabpn1l	100	54.610	ENSDNOG00000034677	PABPN1L	100	60.284	Dasypus_novemcinctus
ENSMOCG00000007955	Pabpn1l	100	69.343	ENSEASG00005000777	PABPN1L	100	69.343	Equus_asinus_asinus
ENSMOCG00000007955	Pabpn1l	100	69.343	ENSECAG00000000378	PABPN1L	100	69.343	Equus_caballus
ENSMOCG00000007955	Pabpn1l	100	58.672	ENSEEUG00000004747	PABPN1L	100	58.672	Erinaceus_europaeus
ENSMOCG00000007955	Pabpn1l	55	53.378	ENSELUG00000018385	PABPN1L	69	50.543	Esox_lucius
ENSMOCG00000007955	Pabpn1l	100	64.875	ENSFCAG00000010465	PABPN1L	100	64.875	Felis_catus
ENSMOCG00000007955	Pabpn1l	73	54.000	ENSFALG00000003319	PABPN1L	97	49.593	Ficedula_albicollis
ENSMOCG00000007955	Pabpn1l	100	67.279	ENSFDAG00000021067	PABPN1L	100	67.279	Fukomys_damarensis
ENSMOCG00000007955	Pabpn1l	54	63.087	ENSGALG00000006242	PABPN1L	85	63.087	Gallus_gallus
ENSMOCG00000007955	Pabpn1l	57	59.355	ENSGAGG00000010613	PABPN1L	52	59.119	Gopherus_agassizii
ENSMOCG00000007955	Pabpn1l	100	65.818	ENSGGOG00000012670	PABPN1L	100	68.478	Gorilla_gorilla
ENSMOCG00000007955	Pabpn1l	57	50.980	ENSHBUG00000002388	PABPN1L	72	44.444	Haplochromis_burtoni
ENSMOCG00000007955	Pabpn1l	97	65.779	ENSHGLG00000014207	PABPN1L	100	67.300	Heterocephalus_glaber_female
ENSMOCG00000007955	Pabpn1l	97	65.779	ENSHGLG00100005230	PABPN1L	100	67.300	Heterocephalus_glaber_male
ENSMOCG00000007955	Pabpn1l	100	65.950	ENSSTOG00000020814	PABPN1L	100	65.950	Ictidomys_tridecemlineatus
ENSMOCG00000007955	Pabpn1l	100	71.636	ENSJJAG00000006433	Pabpn1l	100	71.636	Jaculus_jaculus
ENSMOCG00000007955	Pabpn1l	86	55.466	ENSLAFG00000025902	-	92	55.466	Loxodonta_africana
ENSMOCG00000007955	Pabpn1l	100	64.727	ENSMFAG00000002924	PABPN1L	100	67.391	Macaca_fascicularis
ENSMOCG00000007955	Pabpn1l	100	64.727	ENSMMUG00000012438	PABPN1L	100	67.391	Macaca_mulatta
ENSMOCG00000007955	Pabpn1l	100	64.727	ENSMNEG00000044808	PABPN1L	100	67.391	Macaca_nemestrina
ENSMOCG00000007955	Pabpn1l	100	65.455	ENSMLEG00000032667	PABPN1L	100	68.116	Mandrillus_leucophaeus
ENSMOCG00000007955	Pabpn1l	57	50.980	ENSMZEG00005002186	PABPN1L	72	44.949	Maylandia_zebra
ENSMOCG00000007955	Pabpn1l	100	83.026	ENSMAUG00000014032	Pabpn1l	100	84.411	Mesocricetus_auratus
ENSMOCG00000007955	Pabpn1l	100	70.545	ENSMICG00000028179	PABPN1L	100	70.545	Microcebus_murinus
ENSMOCG00000007955	Pabpn1l	55	45.513	ENSMMOG00000017714	PABPN1L	72	43.750	Mola_mola
ENSMOCG00000007955	Pabpn1l	100	53.091	ENSMODG00000003873	-	100	53.091	Monodelphis_domestica
ENSMOCG00000007955	Pabpn1l	100	79.487	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	79.487	Mus_caroli
ENSMOCG00000007955	Pabpn1l	100	78.022	ENSMUSG00000069867	Pabpn1l	100	78.022	Mus_musculus
ENSMOCG00000007955	Pabpn1l	100	78.388	MGP_PahariEiJ_G0023268	Pabpn1l	100	78.388	Mus_pahari
ENSMOCG00000007955	Pabpn1l	100	77.289	MGP_SPRETEiJ_G0032788	Pabpn1l	100	77.289	Mus_spretus
ENSMOCG00000007955	Pabpn1l	83	54.393	ENSMLUG00000003228	PABPN1L	80	54.393	Myotis_lucifugus
ENSMOCG00000007955	Pabpn1l	100	78.676	ENSNGAG00000023992	Pabpn1l	100	78.676	Nannospalax_galili
ENSMOCG00000007955	Pabpn1l	57	50.980	ENSNBRG00000017078	PABPN1L	73	45.902	Neolamprologus_brichardi
ENSMOCG00000007955	Pabpn1l	100	69.597	ENSOPRG00000005597	PABPN1L	100	69.597	Ochotona_princeps
ENSMOCG00000007955	Pabpn1l	100	59.862	ENSODEG00000004649	PABPN1L	100	59.862	Octodon_degus
ENSMOCG00000007955	Pabpn1l	100	54.643	ENSOANG00000013901	PABPN1L	100	55.797	Ornithorhynchus_anatinus
ENSMOCG00000007955	Pabpn1l	64	49.425	ENSORLG00000026560	PABPN1L	63	49.425	Oryzias_latipes
ENSMOCG00000007955	Pabpn1l	64	49.425	ENSORLG00020015068	PABPN1L	63	49.425	Oryzias_latipes_hni
ENSMOCG00000007955	Pabpn1l	64	49.425	ENSORLG00015000397	PABPN1L	63	49.425	Oryzias_latipes_hsok
ENSMOCG00000007955	Pabpn1l	78	44.286	ENSOMEG00000017896	PABPN1L	53	44.286	Oryzias_melastigma
ENSMOCG00000007955	Pabpn1l	100	66.909	ENSOGAG00000000433	PABPN1L	100	66.909	Otolemur_garnettii
ENSMOCG00000007955	Pabpn1l	100	62.745	ENSOARG00000013682	PABPN1L	100	63.399	Ovis_aries
ENSMOCG00000007955	Pabpn1l	100	67.742	ENSPPAG00000028866	PABPN1L	100	67.742	Pan_paniscus
ENSMOCG00000007955	Pabpn1l	100	64.875	ENSPPRG00000015106	PABPN1L	100	64.875	Panthera_pardus
ENSMOCG00000007955	Pabpn1l	93	59.690	ENSPTIG00000015606	PABPN1L	100	59.690	Panthera_tigris_altaica
ENSMOCG00000007955	Pabpn1l	100	67.742	ENSPTRG00000031120	PABPN1L	100	67.742	Pan_troglodytes
ENSMOCG00000007955	Pabpn1l	100	64.727	ENSPANG00000026039	PABPN1L	100	67.391	Papio_anubis
ENSMOCG00000007955	Pabpn1l	71	55.051	ENSPSIG00000003404	PABPN1L	100	56.219	Pelodiscus_sinensis
ENSMOCG00000007955	Pabpn1l	100	82.657	ENSPEMG00000016624	Pabpn1l	100	82.657	Peromyscus_maniculatus_bairdii
ENSMOCG00000007955	Pabpn1l	53	63.946	ENSPCIG00000007038	-	100	63.946	Phascolarctos_cinereus
ENSMOCG00000007955	Pabpn1l	100	65.827	ENSPPYG00000007655	PABPN1L	100	68.100	Pongo_abelii
ENSMOCG00000007955	Pabpn1l	100	69.818	ENSPCOG00000024077	PABPN1L	100	71.273	Propithecus_coquereli
ENSMOCG00000007955	Pabpn1l	100	65.603	ENSPVAG00000002716	PABPN1L	100	65.957	Pteropus_vampyrus
ENSMOCG00000007955	Pabpn1l	57	50.980	ENSPNYG00000004803	PABPN1L	72	44.949	Pundamilia_nyererei
ENSMOCG00000007955	Pabpn1l	100	80.000	ENSRNOG00000029558	Pabpn1l	100	80.000	Rattus_norvegicus
ENSMOCG00000007955	Pabpn1l	100	66.545	ENSRBIG00000030740	PABPN1L	100	69.203	Rhinopithecus_bieti
ENSMOCG00000007955	Pabpn1l	99	65.328	ENSRROG00000035483	-	99	67.636	Rhinopithecus_roxellana
ENSMOCG00000007955	Pabpn1l	100	67.754	ENSRROG00000032240	-	100	68.478	Rhinopithecus_roxellana
ENSMOCG00000007955	Pabpn1l	100	65.942	ENSSBOG00000018410	PABPN1L	100	66.426	Saimiri_boliviensis_boliviensis
ENSMOCG00000007955	Pabpn1l	100	48.197	ENSSHAG00000010001	-	100	49.498	Sarcophilus_harrisii
ENSMOCG00000007955	Pabpn1l	57	52.288	ENSSMAG00000021348	PABPN1L	67	49.189	Scophthalmus_maximus
ENSMOCG00000007955	Pabpn1l	87	53.617	ENSSARG00000005178	-	94	53.617	Sorex_araneus
ENSMOCG00000007955	Pabpn1l	71	57.143	ENSSPUG00000007031	PABPN1L	85	57.000	Sphenodon_punctatus
ENSMOCG00000007955	Pabpn1l	56	52.318	ENSSPAG00000017978	PABPN1L	72	45.226	Stegastes_partitus
ENSMOCG00000007955	Pabpn1l	100	67.376	ENSSSCG00000036367	PABPN1L	100	68.345	Sus_scrofa
ENSMOCG00000007955	Pabpn1l	60	45.679	ENSTRUG00000024725	PABPN1L	80	44.444	Takifugu_rubripes
ENSMOCG00000007955	Pabpn1l	100	64.029	ENSTTRG00000004691	PABPN1L	100	65.591	Tursiops_truncatus
ENSMOCG00000007955	Pabpn1l	55	53.247	ENSXETG00000011258	pabpn1l	89	50.251	Xenopus_tropicalis