EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000007956 (Gene tree)
Gene ID: 101998802
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 69101 bases
Position: chrLG4:56677172-56746272
Accession: 101998802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008048	Lactamase_B	PF00753.27	2.9e-10	1	1
ENSMOCP00000008043	Lactamase_B	PF00753.27	3.9e-10	1	1
ENSMOCP00000008050	Lactamase_B	PF00753.27	5.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010258	-	2999	XM_005361642	ENSMOCP00000008043	386 (aa)	XP_005361699	UPI00038BBADF
ENSMOCT00000010265	-	1275	-	ENSMOCP00000008050	425 (aa)	-	-
ENSMOCT00000010263	-	2728	XM_005361643	ENSMOCP00000008048	360 (aa)	XP_005361700	UPI00038C6097

Gene Model

Click here to download ENSMOCG00000007956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000007956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000007956	Pnkd	64	41.667	ENSMOCG00000011485	Haghl	100	41.667
ENSMOCG00000007956	Pnkd	74	41.729	ENSMOCG00000020674	Hagh	98	41.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000007956	Pnkd	100	95.855	ENSG00000127838	PNKD	100	94.301	Homo_sapiens
ENSMOCG00000007956	Pnkd	89	61.755	ENSAPOG00000019072	pnkd	97	57.143	Acanthochromis_polyacanthus
ENSMOCG00000007956	Pnkd	100	95.337	ENSAMEG00000003089	PNKD	100	93.782	Ailuropoda_melanoleuca
ENSMOCG00000007956	Pnkd	85	61.765	ENSACIG00000015359	pnkd	84	61.765	Amphilophus_citrinellus
ENSMOCG00000007956	Pnkd	89	61.442	ENSAOCG00000011458	-	89	61.442	Amphiprion_ocellaris
ENSMOCG00000007956	Pnkd	83	59.000	ENSAOCG00000024159	pnkd	97	53.846	Amphiprion_ocellaris
ENSMOCG00000007956	Pnkd	89	61.442	ENSAPEG00000011710	pnkd	89	61.442	Amphiprion_percula
ENSMOCG00000007956	Pnkd	89	61.129	ENSATEG00000002727	pnkd	97	56.977	Anabas_testudineus
ENSMOCG00000007956	Pnkd	89	62.500	ENSACAG00000001617	PNKD	89	62.500	Anolis_carolinensis
ENSMOCG00000007956	Pnkd	100	95.855	ENSANAG00000019661	PNKD	100	95.912	Aotus_nancymaae
ENSMOCG00000007956	Pnkd	95	59.767	ENSACLG00000021665	pnkd	89	62.069	Astatotilapia_calliptera
ENSMOCG00000007956	Pnkd	100	58.172	ENSAMXG00000043305	pnkd	90	61.963	Astyanax_mexicanus
ENSMOCG00000007956	Pnkd	100	90.833	ENSBTAG00000003936	PNKD	100	90.833	Bos_taurus
ENSMOCG00000007956	Pnkd	100	95.855	ENSCJAG00000010820	PNKD	100	94.301	Callithrix_jacchus
ENSMOCG00000007956	Pnkd	100	93.264	ENSCAFG00000014632	PNKD	100	91.710	Canis_familiaris
ENSMOCG00000007956	Pnkd	100	90.556	ENSCAFG00020027093	PNKD	100	90.556	Canis_lupus_dingo
ENSMOCG00000007956	Pnkd	100	94.819	ENSCHIG00000002862	PNKD	100	93.264	Capra_hircus
ENSMOCG00000007956	Pnkd	100	95.596	ENSTSYG00000034863	PNKD	100	94.041	Carlito_syrichta
ENSMOCG00000007956	Pnkd	100	95.596	ENSCPOG00000020589	PNKD	100	94.041	Cavia_porcellus
ENSMOCG00000007956	Pnkd	100	95.596	ENSCCAG00000036713	PNKD	100	94.041	Cebus_capucinus
ENSMOCG00000007956	Pnkd	100	96.114	ENSCATG00000041188	PNKD	100	96.114	Cercocebus_atys
ENSMOCG00000007956	Pnkd	100	96.891	ENSCLAG00000012048	PNKD	100	96.891	Chinchilla_lanigera
ENSMOCG00000007956	Pnkd	100	96.114	ENSCSAG00000008892	PNKD	100	96.114	Chlorocebus_sabaeus
ENSMOCG00000007956	Pnkd	100	96.114	ENSCANG00000032283	PNKD	100	96.114	Colobus_angolensis_palliatus
ENSMOCG00000007956	Pnkd	100	99.223	ENSCGRG00001024071	Pnkd	100	99.223	Cricetulus_griseus_chok1gshd
ENSMOCG00000007956	Pnkd	100	99.167	ENSCGRG00000005443	Pnkd	100	99.167	Cricetulus_griseus_crigri
ENSMOCG00000007956	Pnkd	98	55.899	ENSCSEG00000013958	pnkd	99	53.782	Cynoglossus_semilaevis
ENSMOCG00000007956	Pnkd	89	61.755	ENSCVAG00000005723	pnkd	89	61.755	Cyprinodon_variegatus
ENSMOCG00000007956	Pnkd	100	55.956	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
ENSMOCG00000007956	Pnkd	99	91.086	ENSDNOG00000046154	PNKD	89	90.278	Dasypus_novemcinctus
ENSMOCG00000007956	Pnkd	100	96.392	ENSDORG00000016109	Pnkd	100	96.392	Dipodomys_ordii
ENSMOCG00000007956	Pnkd	100	65.128	ENSETEG00000014587	PNKD	100	65.128	Echinops_telfairi
ENSMOCG00000007956	Pnkd	85	54.248	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
ENSMOCG00000007956	Pnkd	100	90.833	ENSEASG00005012391	PNKD	100	90.833	Equus_asinus_asinus
ENSMOCG00000007956	Pnkd	100	94.301	ENSECAG00000013322	PNKD	100	92.746	Equus_caballus
ENSMOCG00000007956	Pnkd	89	59.875	ENSELUG00000015007	pnkd	91	56.000	Esox_lucius
ENSMOCG00000007956	Pnkd	100	90.833	ENSFCAG00000002373	PNKD	100	90.833	Felis_catus
ENSMOCG00000007956	Pnkd	86	63.107	ENSFALG00000004028	PNKD	97	61.774	Ficedula_albicollis
ENSMOCG00000007956	Pnkd	100	96.114	ENSFDAG00000012326	PNKD	100	95.912	Fukomys_damarensis
ENSMOCG00000007956	Pnkd	89	61.755	ENSFHEG00000010999	pnkd	86	61.755	Fundulus_heteroclitus
ENSMOCG00000007956	Pnkd	100	56.510	ENSGMOG00000009565	pnkd	96	56.686	Gadus_morhua
ENSMOCG00000007956	Pnkd	85	62.745	ENSGALG00000022166	PNKD	98	62.745	Gallus_gallus
ENSMOCG00000007956	Pnkd	89	62.069	ENSGAFG00000013942	pnkd	80	62.069	Gambusia_affinis
ENSMOCG00000007956	Pnkd	96	59.420	ENSGACG00000007119	pnkd	91	61.162	Gasterosteus_aculeatus
ENSMOCG00000007956	Pnkd	88	61.635	ENSGAGG00000017234	PNKD	100	61.635	Gopherus_agassizii
ENSMOCG00000007956	Pnkd	100	95.855	ENSGGOG00000006892	PNKD	100	94.301	Gorilla_gorilla
ENSMOCG00000007956	Pnkd	95	59.767	ENSHBUG00000001234	pnkd	89	62.069	Haplochromis_burtoni
ENSMOCG00000007956	Pnkd	100	95.078	ENSHGLG00000013971	PNKD	100	94.301	Heterocephalus_glaber_female
ENSMOCG00000007956	Pnkd	100	95.078	ENSHGLG00100005225	PNKD	100	94.301	Heterocephalus_glaber_male
ENSMOCG00000007956	Pnkd	99	57.703	ENSHCOG00000018894	pnkd	88	62.420	Hippocampus_comes
ENSMOCG00000007956	Pnkd	100	59.504	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
ENSMOCG00000007956	Pnkd	100	97.668	ENSSTOG00000024593	PNKD	100	97.668	Ictidomys_tridecemlineatus
ENSMOCG00000007956	Pnkd	100	94.560	ENSJJAG00000023559	Pnkd	100	94.041	Jaculus_jaculus
ENSMOCG00000007956	Pnkd	89	61.129	ENSKMAG00000014879	pnkd	89	61.129	Kryptolebias_marmoratus
ENSMOCG00000007956	Pnkd	89	61.442	ENSLBEG00000000985	pnkd	89	61.442	Labrus_bergylta
ENSMOCG00000007956	Pnkd	100	57.650	ENSLOCG00000000821	pnkd	89	61.442	Lepisosteus_oculatus
ENSMOCG00000007956	Pnkd	100	92.471	ENSLAFG00000007427	PNKD	100	91.294	Loxodonta_africana
ENSMOCG00000007956	Pnkd	100	96.114	ENSMFAG00000038281	PNKD	100	96.114	Macaca_fascicularis
ENSMOCG00000007956	Pnkd	50	97.790	ENSMMUG00000022819	-	100	97.790	Macaca_mulatta
ENSMOCG00000007956	Pnkd	100	92.521	ENSMNEG00000041541	PNKD	100	96.497	Macaca_nemestrina
ENSMOCG00000007956	Pnkd	100	96.114	ENSMLEG00000042812	PNKD	100	96.114	Mandrillus_leucophaeus
ENSMOCG00000007956	Pnkd	89	61.442	ENSMAMG00000017212	pnkd	99	56.022	Mastacembelus_armatus
ENSMOCG00000007956	Pnkd	82	62.373	ENSMZEG00005012514	pnkd	100	62.373	Maylandia_zebra
ENSMOCG00000007956	Pnkd	50	51.364	ENSMGAG00000011524	PNKD	80	62.570	Meleagris_gallopavo
ENSMOCG00000007956	Pnkd	100	98.889	ENSMAUG00000013099	Pnkd	100	98.889	Mesocricetus_auratus
ENSMOCG00000007956	Pnkd	100	96.632	ENSMICG00000042547	PNKD	100	96.632	Microcebus_murinus
ENSMOCG00000007956	Pnkd	86	62.136	ENSMMOG00000005679	pnkd	89	62.541	Mola_mola
ENSMOCG00000007956	Pnkd	86	79.421	ENSMODG00000015497	PNKD	87	79.421	Monodelphis_domestica
ENSMOCG00000007956	Pnkd	95	60.290	ENSMALG00000005967	pnkd	80	62.579	Monopterus_albus
ENSMOCG00000007956	Pnkd	100	98.705	MGP_CAROLIEiJ_G0014258	Pnkd	100	98.705	Mus_caroli
ENSMOCG00000007956	Pnkd	100	99.059	ENSMUSG00000026179	Pnkd	100	99.059	Mus_musculus
ENSMOCG00000007956	Pnkd	100	99.059	MGP_PahariEiJ_G0027496	Pnkd	100	99.059	Mus_pahari
ENSMOCG00000007956	Pnkd	100	98.705	MGP_SPRETEiJ_G0015064	Pnkd	100	98.705	Mus_spretus
ENSMOCG00000007956	Pnkd	100	91.667	ENSMPUG00000016531	PNKD	100	91.667	Mustela_putorius_furo
ENSMOCG00000007956	Pnkd	85	94.444	ENSMLUG00000004125	PNKD	100	94.444	Myotis_lucifugus
ENSMOCG00000007956	Pnkd	100	97.668	ENSNGAG00000014980	Pnkd	100	97.668	Nannospalax_galili
ENSMOCG00000007956	Pnkd	86	62.338	ENSNBRG00000020031	pnkd	96	62.136	Neolamprologus_brichardi
ENSMOCG00000007956	Pnkd	100	73.057	ENSMEUG00000011266	PNKD	100	72.021	Notamacropus_eugenii
ENSMOCG00000007956	Pnkd	100	95.278	ENSODEG00000009734	PNKD	100	95.278	Octodon_degus
ENSMOCG00000007956	Pnkd	95	59.184	ENSONIG00000004389	pnkd	89	61.442	Oreochromis_niloticus
ENSMOCG00000007956	Pnkd	100	92.941	ENSOCUG00000023754	PNKD	100	92.471	Oryctolagus_cuniculus
ENSMOCG00000007956	Pnkd	89	59.574	ENSORLG00000026276	pnkd	91	59.574	Oryzias_latipes
ENSMOCG00000007956	Pnkd	89	59.574	ENSORLG00020008373	pnkd	97	61.589	Oryzias_latipes_hni
ENSMOCG00000007956	Pnkd	89	59.878	ENSORLG00015005276	pnkd	91	59.878	Oryzias_latipes_hsok
ENSMOCG00000007956	Pnkd	90	60.429	ENSOMEG00000016106	pnkd	91	60.429	Oryzias_melastigma
ENSMOCG00000007956	Pnkd	85	96.732	ENSOGAG00000001792	PNKD	100	96.732	Otolemur_garnettii
ENSMOCG00000007956	Pnkd	100	95.078	ENSOARG00000019505	PNKD	100	93.523	Ovis_aries
ENSMOCG00000007956	Pnkd	100	95.855	ENSPPAG00000034969	PNKD	100	94.301	Pan_paniscus
ENSMOCG00000007956	Pnkd	100	90.833	ENSPPRG00000023720	PNKD	100	90.833	Panthera_pardus
ENSMOCG00000007956	Pnkd	100	88.342	ENSPTIG00000021040	PNKD	100	86.788	Panthera_tigris_altaica
ENSMOCG00000007956	Pnkd	100	95.596	ENSPTRG00000012914	PNKD	100	94.041	Pan_troglodytes
ENSMOCG00000007956	Pnkd	100	96.114	ENSPANG00000005752	PNKD	100	96.114	Papio_anubis
ENSMOCG00000007956	Pnkd	97	58.046	ENSPKIG00000011208	pnkd	100	59.748	Paramormyrops_kingsleyae
ENSMOCG00000007956	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
ENSMOCG00000007956	Pnkd	100	98.705	ENSPEMG00000010689	Pnkd	100	98.705	Peromyscus_maniculatus_bairdii
ENSMOCG00000007956	Pnkd	85	53.922	ENSPMAG00000006947	pnkd	99	53.922	Petromyzon_marinus
ENSMOCG00000007956	Pnkd	91	79.448	ENSPCIG00000021457	PNKD	90	79.448	Phascolarctos_cinereus
ENSMOCG00000007956	Pnkd	88	62.540	ENSPFOG00000010628	pnkd	95	57.849	Poecilia_formosa
ENSMOCG00000007956	Pnkd	62	66.071	ENSPLAG00000020583	pnkd	95	59.289	Poecilia_latipinna
ENSMOCG00000007956	Pnkd	72	65.251	ENSPMEG00000006542	pnkd	73	59.722	Poecilia_mexicana
ENSMOCG00000007956	Pnkd	88	61.905	ENSPREG00000014434	pnkd	95	57.434	Poecilia_reticulata
ENSMOCG00000007956	Pnkd	100	95.855	ENSPPYG00000013167	PNKD	100	94.301	Pongo_abelii
ENSMOCG00000007956	Pnkd	100	76.166	ENSPCAG00000003946	PNKD	100	74.870	Procavia_capensis
ENSMOCG00000007956	Pnkd	100	96.891	ENSPCOG00000019839	PNKD	100	96.891	Propithecus_coquereli
ENSMOCG00000007956	Pnkd	88	62.264	ENSPNYG00000016327	pnkd	100	62.264	Pundamilia_nyererei
ENSMOCG00000007956	Pnkd	100	58.726	ENSPNAG00000008655	pnkd	100	58.726	Pygocentrus_nattereri
ENSMOCG00000007956	Pnkd	100	98.705	ENSRNOG00000014806	Pnkd	100	98.705	Rattus_norvegicus
ENSMOCG00000007956	Pnkd	100	96.114	ENSRBIG00000031614	PNKD	100	96.114	Rhinopithecus_bieti
ENSMOCG00000007956	Pnkd	100	96.114	ENSRROG00000045542	PNKD	100	96.114	Rhinopithecus_roxellana
ENSMOCG00000007956	Pnkd	100	95.337	ENSSBOG00000036000	PNKD	100	93.782	Saimiri_boliviensis_boliviensis
ENSMOCG00000007956	Pnkd	88	80.062	ENSSHAG00000016339	PNKD	100	80.062	Sarcophilus_harrisii
ENSMOCG00000007956	Pnkd	90	62.154	ENSSFOG00015013028	pnkd	87	62.154	Scleropages_formosus
ENSMOCG00000007956	Pnkd	89	61.755	ENSSMAG00000006812	pnkd	97	56.571	Scophthalmus_maximus
ENSMOCG00000007956	Pnkd	89	60.815	ENSSDUG00000012538	pnkd	89	60.815	Seriola_dumerili
ENSMOCG00000007956	Pnkd	89	60.815	ENSSLDG00000021431	pnkd	86	60.815	Seriola_lalandi_dorsalis
ENSMOCG00000007956	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	52.131	Sphenodon_punctatus
ENSMOCG00000007956	Pnkd	89	61.442	ENSSPAG00000007083	pnkd	89	61.442	Stegastes_partitus
ENSMOCG00000007956	Pnkd	100	95.109	ENSSSCG00000029002	PNKD	100	94.904	Sus_scrofa
ENSMOCG00000007956	Pnkd	89	59.875	ENSTRUG00000009399	pnkd	89	59.875	Takifugu_rubripes
ENSMOCG00000007956	Pnkd	92	59.819	ENSTNIG00000010992	pnkd	92	59.819	Tetraodon_nigroviridis
ENSMOCG00000007956	Pnkd	100	93.264	ENSTTRG00000012895	PNKD	100	91.710	Tursiops_truncatus
ENSMOCG00000007956	Pnkd	100	90.556	ENSUAMG00000000289	PNKD	100	90.556	Ursus_americanus
ENSMOCG00000007956	Pnkd	100	79.275	ENSUMAG00000019639	PNKD	100	77.720	Ursus_maritimus
ENSMOCG00000007956	Pnkd	100	95.337	ENSVVUG00000007348	PNKD	100	93.782	Vulpes_vulpes
ENSMOCG00000007956	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
ENSMOCG00000007956	Pnkd	86	62.662	ENSXCOG00000014370	pnkd	95	62.662	Xiphophorus_couchianus