EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000008208 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 43352 bases
Position: chr7:5444949-5488300
Accession: 101982568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008256	MMR_HSR1	PF01926.23	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010569	-	2550	XM_005349244	ENSMOCP00000008256	472 (aa)	XP_005349301	UPI00038BD4EC

Gene Model

Click here to download ENSMOCG00000008208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000008208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000008208	Srl	74	33.714	ENSMOCG00000012572	Ehd3	70	33.421
ENSMOCG00000008208	Srl	82	32.905	ENSMOCG00000007010	Ehd2	65	34.254
ENSMOCG00000008208	Srl	63	35.906	ENSMOCG00000010893	Ehd4	55	35.906
ENSMOCG00000008208	Srl	77	33.973	ENSMOCG00000015517	Ehd1	67	33.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000008208	Srl	100	95.560	ENSG00000185739	SRL	100	97.216	Homo_sapiens
ENSMOCG00000008208	Srl	94	76.471	ENSAPOG00000012432	SRL	98	75.339	Acanthochromis_polyacanthus
ENSMOCG00000008208	Srl	100	80.297	ENSAPOG00000018093	srl	100	83.333	Acanthochromis_polyacanthus
ENSMOCG00000008208	Srl	98	96.104	ENSAMEG00000010862	SRL	52	96.104	Ailuropoda_melanoleuca
ENSMOCG00000008208	Srl	96	82.522	ENSACIG00000015799	srl	99	82.522	Amphilophus_citrinellus
ENSMOCG00000008208	Srl	94	74.324	ENSACIG00000015419	SRL	99	74.324	Amphilophus_citrinellus
ENSMOCG00000008208	Srl	96	74.781	ENSAOCG00000017049	SRL	99	74.348	Amphiprion_ocellaris
ENSMOCG00000008208	Srl	92	84.101	ENSAOCG00000007574	srl	100	84.101	Amphiprion_ocellaris
ENSMOCG00000008208	Srl	100	80.508	ENSAPEG00000006911	srl	100	80.508	Amphiprion_percula
ENSMOCG00000008208	Srl	96	70.769	ENSAPEG00000006533	SRL	99	70.370	Amphiprion_percula
ENSMOCG00000008208	Srl	100	80.297	ENSATEG00000024315	srl	100	80.297	Anabas_testudineus
ENSMOCG00000008208	Srl	94	73.187	ENSATEG00000009643	SRL	52	72.527	Anabas_testudineus
ENSMOCG00000008208	Srl	100	86.270	ENSACAG00000016380	SRL	89	86.680	Anolis_carolinensis
ENSMOCG00000008208	Srl	94	72.308	ENSACLG00000024674	SRL	57	72.527	Astatotilapia_calliptera
ENSMOCG00000008208	Srl	100	79.873	ENSACLG00000027685	srl	98	82.667	Astatotilapia_calliptera
ENSMOCG00000008208	Srl	88	77.831	ENSAMXG00000038693	SRL	100	73.068	Astyanax_mexicanus
ENSMOCG00000008208	Srl	99	80.042	ENSAMXG00000018789	srl	92	80.042	Astyanax_mexicanus
ENSMOCG00000008208	Srl	96	95.585	ENSBTAG00000001078	SRL	57	95.585	Bos_taurus
ENSMOCG00000008208	Srl	94	97.065	ENSCJAG00000019750	SRL	100	95.560	Callithrix_jacchus
ENSMOCG00000008208	Srl	97	96.304	ENSCAFG00000019233	SRL	84	97.124	Canis_familiaris
ENSMOCG00000008208	Srl	96	96.703	ENSCAFG00020025024	SRL	56	96.703	Canis_lupus_dingo
ENSMOCG00000008208	Srl	99	94.409	ENSCHIG00000017927	SRL	57	95.585	Capra_hircus
ENSMOCG00000008208	Srl	100	96.829	ENSTSYG00000007919	SRL	100	97.680	Carlito_syrichta
ENSMOCG00000008208	Srl	100	97.246	ENSCPOG00000012643	SRL	100	97.246	Cavia_porcellus
ENSMOCG00000008208	Srl	100	88.584	ENSCCAG00000032646	SRL	100	97.361	Cebus_capucinus
ENSMOCG00000008208	Srl	100	95.772	ENSCATG00000032227	-	100	95.772	Cercocebus_atys
ENSMOCG00000008208	Srl	100	97.034	ENSCLAG00000016242	SRL	100	97.034	Chinchilla_lanigera
ENSMOCG00000008208	Srl	82	96.104	ENSCHOG00000001618	SRL	52	96.104	Choloepus_hoffmanni
ENSMOCG00000008208	Srl	96	92.228	ENSCPBG00000026371	SRL	99	87.603	Chrysemys_picta_bellii
ENSMOCG00000008208	Srl	94	57.718	ENSCING00000005231	-	96	57.798	Ciona_intestinalis
ENSMOCG00000008208	Srl	100	95.772	ENSCANG00000035872	SRL	100	97.216	Colobus_angolensis_palliatus
ENSMOCG00000008208	Srl	100	99.153	ENSCGRG00001016630	Srl	100	99.153	Cricetulus_griseus_chok1gshd
ENSMOCG00000008208	Srl	100	99.153	ENSCGRG00000005458	Srl	100	99.153	Cricetulus_griseus_crigri
ENSMOCG00000008208	Srl	99	70.149	ENSCSEG00000011866	SRL	94	70.362	Cynoglossus_semilaevis
ENSMOCG00000008208	Srl	100	80.508	ENSCSEG00000016151	srl	100	80.508	Cynoglossus_semilaevis
ENSMOCG00000008208	Srl	100	80.297	ENSCVAG00000003513	srl	100	80.297	Cyprinodon_variegatus
ENSMOCG00000008208	Srl	94	75.000	ENSCVAG00000022465	SRL	60	73.894	Cyprinodon_variegatus
ENSMOCG00000008208	Srl	80	77.083	ENSDARG00000112959	CABZ01072309.1	100	77.083	Danio_rerio
ENSMOCG00000008208	Srl	100	81.568	ENSDARG00000104587	srl	100	81.568	Danio_rerio
ENSMOCG00000008208	Srl	96	96.009	ENSDNOG00000011643	SRL	54	95.815	Dasypus_novemcinctus
ENSMOCG00000008208	Srl	100	97.669	ENSDORG00000014807	Srl	100	97.669	Dipodomys_ordii
ENSMOCG00000008208	Srl	75	67.787	ENSEBUG00000015937	srl	88	67.529	Eptatretus_burgeri
ENSMOCG00000008208	Srl	95	96.000	ENSEASG00005000942	SRL	55	95.806	Equus_asinus_asinus
ENSMOCG00000008208	Srl	99	95.339	ENSECAG00000024219	SRL	99	95.339	Equus_caballus
ENSMOCG00000008208	Srl	100	77.207	ENSELUG00000015616	srl	100	77.207	Esox_lucius
ENSMOCG00000008208	Srl	100	94.503	ENSFCAG00000022075	SRL	100	95.560	Felis_catus
ENSMOCG00000008208	Srl	96	89.183	ENSFALG00000004328	SRL	64	89.579	Ficedula_albicollis
ENSMOCG00000008208	Srl	100	97.458	ENSFDAG00000006199	SRL	100	97.458	Fukomys_damarensis
ENSMOCG00000008208	Srl	100	79.873	ENSFHEG00000011239	srl	100	79.873	Fundulus_heteroclitus
ENSMOCG00000008208	Srl	99	70.928	ENSFHEG00000011854	SRL	98	76.018	Fundulus_heteroclitus
ENSMOCG00000008208	Srl	93	80.795	ENSGMOG00000014954	srl	99	80.795	Gadus_morhua
ENSMOCG00000008208	Srl	99	88.535	ENSGALG00000038884	SRL	99	88.535	Gallus_gallus
ENSMOCG00000008208	Srl	94	76.697	ENSGAFG00000016984	SRL	98	75.566	Gambusia_affinis
ENSMOCG00000008208	Srl	100	79.873	ENSGAFG00000000010	srl	99	81.046	Gambusia_affinis
ENSMOCG00000008208	Srl	93	81.236	ENSGACG00000011332	srl	99	81.236	Gasterosteus_aculeatus
ENSMOCG00000008208	Srl	100	95.349	ENSGGOG00000011312	-	100	95.349	Gorilla_gorilla
ENSMOCG00000008208	Srl	100	79.873	ENSHBUG00000007581	srl	98	82.667	Haplochromis_burtoni
ENSMOCG00000008208	Srl	94	72.088	ENSHBUG00000015710	SRL	57	72.308	Haplochromis_burtoni
ENSMOCG00000008208	Srl	100	97.881	ENSHGLG00000015271	SRL	100	97.881	Heterocephalus_glaber_female
ENSMOCG00000008208	Srl	100	97.881	ENSHGLG00100019378	SRL	100	97.881	Heterocephalus_glaber_male
ENSMOCG00000008208	Srl	94	72.185	ENSHCOG00000001012	SRL	50	71.082	Hippocampus_comes
ENSMOCG00000008208	Srl	100	79.237	ENSHCOG00000008687	srl	98	82.805	Hippocampus_comes
ENSMOCG00000008208	Srl	100	79.237	ENSIPUG00000012513	srl	100	79.237	Ictalurus_punctatus
ENSMOCG00000008208	Srl	92	70.413	ENSIPUG00000011609	SRL	95	69.266	Ictalurus_punctatus
ENSMOCG00000008208	Srl	100	97.458	ENSSTOG00000021151	-	100	97.458	Ictidomys_tridecemlineatus
ENSMOCG00000008208	Srl	100	97.458	ENSJJAG00000016400	Srl	100	97.458	Jaculus_jaculus
ENSMOCG00000008208	Srl	93	75.737	ENSKMAG00000019537	SRL	100	75.737	Kryptolebias_marmoratus
ENSMOCG00000008208	Srl	98	80.477	ENSKMAG00000014115	srl	93	85.036	Kryptolebias_marmoratus
ENSMOCG00000008208	Srl	96	73.684	ENSLBEG00000013811	SRL	98	73.684	Labrus_bergylta
ENSMOCG00000008208	Srl	100	80.297	ENSLBEG00000026643	srl	100	80.297	Labrus_bergylta
ENSMOCG00000008208	Srl	96	85.619	ENSLACG00000002825	SRL	99	85.619	Latimeria_chalumnae
ENSMOCG00000008208	Srl	99	82.340	ENSLOCG00000002644	srl	99	82.340	Lepisosteus_oculatus
ENSMOCG00000008208	Srl	96	96.018	ENSLAFG00000006329	SRL	51	96.018	Loxodonta_africana
ENSMOCG00000008208	Srl	91	97.216	ENSMFAG00000037383	SRL	100	97.216	Macaca_fascicularis
ENSMOCG00000008208	Srl	98	95.445	ENSMNEG00000019236	-	97	95.445	Macaca_nemestrina
ENSMOCG00000008208	Srl	100	87.949	ENSMLEG00000032156	SRL	100	87.949	Mandrillus_leucophaeus
ENSMOCG00000008208	Srl	93	73.348	ENSMAMG00000013756	SRL	53	73.348	Mastacembelus_armatus
ENSMOCG00000008208	Srl	99	79.574	ENSMAMG00000023322	srl	99	79.574	Mastacembelus_armatus
ENSMOCG00000008208	Srl	94	72.308	ENSMZEG00005004010	SRL	57	72.527	Maylandia_zebra
ENSMOCG00000008208	Srl	100	79.873	ENSMZEG00005004548	srl	98	82.667	Maylandia_zebra
ENSMOCG00000008208	Srl	96	89.800	ENSMGAG00000009342	SRL	95	91.755	Meleagris_gallopavo
ENSMOCG00000008208	Srl	96	95.833	ENSMICG00000032307	SRL	100	94.926	Microcebus_murinus
ENSMOCG00000008208	Srl	93	72.588	ENSMMOG00000021572	SRL	99	72.527	Mola_mola
ENSMOCG00000008208	Srl	94	83.258	ENSMMOG00000013970	srl	98	83.258	Mola_mola
ENSMOCG00000008208	Srl	96	95.364	ENSMODG00000016380	-	51	95.364	Monodelphis_domestica
ENSMOCG00000008208	Srl	100	79.915	ENSMALG00000005039	srl	98	82.579	Monopterus_albus
ENSMOCG00000008208	Srl	89	75.656	ENSMALG00000000670	SRL	98	74.463	Monopterus_albus
ENSMOCG00000008208	Srl	100	97.034	MGP_CAROLIEiJ_G0020400	Srl	100	97.034	Mus_caroli
ENSMOCG00000008208	Srl	100	97.034	ENSMUSG00000022519	Srl	100	97.034	Mus_musculus
ENSMOCG00000008208	Srl	100	97.034	MGP_SPRETEiJ_G0021294	Srl	100	97.034	Mus_spretus
ENSMOCG00000008208	Srl	96	96.903	ENSMPUG00000015025	SRL	55	96.903	Mustela_putorius_furo
ENSMOCG00000008208	Srl	96	96.903	ENSMLUG00000030733	SRL	57	96.903	Myotis_lucifugus
ENSMOCG00000008208	Srl	100	97.246	ENSNGAG00000019741	Srl	100	97.246	Nannospalax_galili
ENSMOCG00000008208	Srl	100	79.873	ENSNBRG00000023775	srl	100	79.873	Neolamprologus_brichardi
ENSMOCG00000008208	Srl	94	72.308	ENSNBRG00000002422	SRL	62	69.263	Neolamprologus_brichardi
ENSMOCG00000008208	Srl	100	89.006	ENSNLEG00000029051	SRL	100	89.006	Nomascus_leucogenys
ENSMOCG00000008208	Srl	97	90.217	ENSOPRG00000000477	-	54	90.217	Ochotona_princeps
ENSMOCG00000008208	Srl	100	96.398	ENSODEG00000013256	SRL	100	96.398	Octodon_degus
ENSMOCG00000008208	Srl	99	80.255	ENSONIG00000005192	srl	99	80.255	Oreochromis_niloticus
ENSMOCG00000008208	Srl	97	95.870	ENSOCUG00000025140	SRL	51	95.870	Oryctolagus_cuniculus
ENSMOCG00000008208	Srl	100	79.449	ENSORLG00000008291	srl	92	84.536	Oryzias_latipes
ENSMOCG00000008208	Srl	96	73.836	ENSORLG00000015064	SRL	98	73.836	Oryzias_latipes
ENSMOCG00000008208	Srl	96	74.058	ENSORLG00020018173	SRL	98	74.058	Oryzias_latipes_hni
ENSMOCG00000008208	Srl	100	79.661	ENSORLG00020019784	srl	85	79.661	Oryzias_latipes_hni
ENSMOCG00000008208	Srl	96	74.058	ENSORLG00015019063	SRL	98	74.058	Oryzias_latipes_hsok
ENSMOCG00000008208	Srl	100	79.237	ENSORLG00015009342	srl	97	79.237	Oryzias_latipes_hsok
ENSMOCG00000008208	Srl	94	72.648	ENSOMEG00000005682	SRL	53	72.967	Oryzias_melastigma
ENSMOCG00000008208	Srl	100	79.449	ENSOMEG00000010006	srl	98	82.727	Oryzias_melastigma
ENSMOCG00000008208	Srl	96	96.476	ENSOGAG00000029266	SRL	55	96.476	Otolemur_garnettii
ENSMOCG00000008208	Srl	99	94.409	ENSOARG00000003074	SRL	58	94.409	Ovis_aries
ENSMOCG00000008208	Srl	97	96.070	ENSPPAG00000024919	-	100	96.984	Pan_paniscus
ENSMOCG00000008208	Srl	100	94.715	ENSPPRG00000010274	SRL	100	96.984	Panthera_pardus
ENSMOCG00000008208	Srl	100	94.715	ENSPTIG00000015162	SRL	100	96.984	Panthera_tigris_altaica
ENSMOCG00000008208	Srl	100	95.349	ENSPTRG00000007712	SRL	100	96.984	Pan_troglodytes
ENSMOCG00000008208	Srl	98	95.662	ENSPANG00000013804	SRL	99	95.662	Papio_anubis
ENSMOCG00000008208	Srl	100	80.761	ENSPKIG00000006405	srl	100	80.761	Paramormyrops_kingsleyae
ENSMOCG00000008208	Srl	100	73.941	ENSPKIG00000024974	SRL	94	73.941	Paramormyrops_kingsleyae
ENSMOCG00000008208	Srl	96	89.868	ENSPSIG00000008586	SRL	51	89.868	Pelodiscus_sinensis
ENSMOCG00000008208	Srl	98	81.602	ENSPMGG00000021081	srl	99	81.602	Periophthalmus_magnuspinnatus
ENSMOCG00000008208	Srl	94	73.529	ENSPMGG00000023505	-	99	73.303	Periophthalmus_magnuspinnatus
ENSMOCG00000008208	Srl	100	98.517	ENSPEMG00000015842	Srl	100	98.517	Peromyscus_maniculatus_bairdii
ENSMOCG00000008208	Srl	89	68.119	ENSPMAG00000004786	srl	99	67.890	Petromyzon_marinus
ENSMOCG00000008208	Srl	96	94.678	ENSPCIG00000012128	SRL	98	94.678	Phascolarctos_cinereus
ENSMOCG00000008208	Srl	100	78.306	ENSPFOG00000011408	srl	98	78.870	Poecilia_formosa
ENSMOCG00000008208	Srl	97	81.264	ENSPLAG00000008017	srl	99	81.264	Poecilia_latipinna
ENSMOCG00000008208	Srl	94	76.018	ENSPLAG00000002932	SRL	98	74.887	Poecilia_latipinna
ENSMOCG00000008208	Srl	94	73.742	ENSPMEG00000005890	SRL	59	72.648	Poecilia_mexicana
ENSMOCG00000008208	Srl	100	80.085	ENSPMEG00000006745	srl	99	81.264	Poecilia_mexicana
ENSMOCG00000008208	Srl	100	79.873	ENSPREG00000007751	srl	99	82.697	Poecilia_reticulata
ENSMOCG00000008208	Srl	94	76.923	ENSPREG00000000315	SRL	98	75.792	Poecilia_reticulata
ENSMOCG00000008208	Srl	89	97.613	ENSPPYG00000007053	SRL	98	97.613	Pongo_abelii
ENSMOCG00000008208	Srl	96	95.143	ENSPCAG00000003378	-	51	95.143	Procavia_capensis
ENSMOCG00000008208	Srl	100	94.926	ENSPCOG00000023135	SRL	100	96.752	Propithecus_coquereli
ENSMOCG00000008208	Srl	96	97.124	ENSPVAG00000006586	SRL	56	97.124	Pteropus_vampyrus
ENSMOCG00000008208	Srl	100	79.873	ENSPNYG00000001200	srl	98	82.667	Pundamilia_nyererei
ENSMOCG00000008208	Srl	94	72.308	ENSPNYG00000003423	SRL	57	72.527	Pundamilia_nyererei
ENSMOCG00000008208	Srl	97	73.160	ENSPNAG00000007361	-	95	73.160	Pygocentrus_nattereri
ENSMOCG00000008208	Srl	100	78.602	ENSPNAG00000023106	srl	100	78.602	Pygocentrus_nattereri
ENSMOCG00000008208	Srl	97	96.943	ENSRNOG00000005269	Srl	51	96.943	Rattus_norvegicus
ENSMOCG00000008208	Srl	97	95.435	ENSRBIG00000042358	SRL	51	95.435	Rhinopithecus_bieti
ENSMOCG00000008208	Srl	94	97.065	ENSSBOG00000029273	SRL	100	95.560	Saimiri_boliviensis_boliviensis
ENSMOCG00000008208	Srl	97	94.956	ENSSHAG00000011715	-	51	95.787	Sarcophilus_harrisii
ENSMOCG00000008208	Srl	94	76.018	ENSSFOG00015021327	SRL	51	74.454	Scleropages_formosus
ENSMOCG00000008208	Srl	100	78.306	ENSSFOG00015009773	srl	97	82.819	Scleropages_formosus
ENSMOCG00000008208	Srl	100	80.127	ENSSMAG00000016274	srl	99	81.441	Scophthalmus_maximus
ENSMOCG00000008208	Srl	93	72.867	ENSSMAG00000002232	SRL	50	71.648	Scophthalmus_maximus
ENSMOCG00000008208	Srl	94	83.937	ENSSDUG00000010808	srl	97	83.937	Seriola_dumerili
ENSMOCG00000008208	Srl	94	74.388	ENSSDUG00000009161	SRL	99	74.336	Seriola_dumerili
ENSMOCG00000008208	Srl	96	82.781	ENSSLDG00000022024	srl	99	81.957	Seriola_lalandi_dorsalis
ENSMOCG00000008208	Srl	94	73.961	ENSSLDG00000014601	SRL	99	73.304	Seriola_lalandi_dorsalis
ENSMOCG00000008208	Srl	96	89.823	ENSSPUG00000016859	SRL	99	89.823	Sphenodon_punctatus
ENSMOCG00000008208	Srl	100	80.720	ENSSPAG00000019105	srl	100	80.720	Stegastes_partitus
ENSMOCG00000008208	Srl	93	75.964	ENSSPAG00000014254	SRL	98	74.830	Stegastes_partitus
ENSMOCG00000008208	Srl	96	95.806	ENSSSCG00000007949	SRL	99	96.205	Sus_scrofa
ENSMOCG00000008208	Srl	96	88.791	ENSTGUG00000003951	-	99	89.357	Taeniopygia_guttata
ENSMOCG00000008208	Srl	77	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSMOCG00000008208	Srl	100	80.297	ENSTRUG00000006005	srl	100	80.297	Takifugu_rubripes
ENSMOCG00000008208	Srl	89	75.656	ENSTRUG00000013310	SRL	55	75.179	Takifugu_rubripes
ENSMOCG00000008208	Srl	96	81.498	ENSTNIG00000009739	srl	100	80.085	Tetraodon_nigroviridis
ENSMOCG00000008208	Srl	96	97.124	ENSUAMG00000005701	SRL	56	97.124	Ursus_americanus
ENSMOCG00000008208	Srl	96	97.345	ENSUMAG00000002574	SRL	56	97.345	Ursus_maritimus
ENSMOCG00000008208	Srl	96	96.916	ENSVVUG00000016331	-	50	96.916	Vulpes_vulpes
ENSMOCG00000008208	Srl	96	88.496	ENSXETG00000017313	srl	100	88.496	Xenopus_tropicalis
ENSMOCG00000008208	Srl	96	75.388	ENSXCOG00000014584	SRL	100	74.279	Xiphophorus_couchianus
ENSMOCG00000008208	Srl	89	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSMOCG00000008208	Srl	100	79.873	ENSXMAG00000004625	srl	95	79.873	Xiphophorus_maculatus
ENSMOCG00000008208	Srl	94	73.846	ENSXMAG00000027598	SRL	62	73.846	Xiphophorus_maculatus