EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000008263 (Gene tree)
Gene ID: 101998508
Gene Symbol: Upf2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 100231 bases
Position: chr16:23446765-23546995
Accession: 101998508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008299	Upf2	PF04050.14	1.2e-32	1	1
ENSMOCP00000008299	MIF4G	PF02854.19	5.7e-76	1	3
ENSMOCP00000008299	MIF4G	PF02854.19	5.7e-76	2	3
ENSMOCP00000008299	MIF4G	PF02854.19	5.7e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010639	-	5177	XM_005354863	ENSMOCP00000008299	1268 (aa)	XP_005354920	UPI00038C3DD2

Gene Model

Click here to download ENSMOCG00000008263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000008263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000008263	Upf2	100	96.698	ENSG00000151461	UPF2	100	96.698	Homo_sapiens
ENSMOCG00000008263	Upf2	99	77.725	ENSAPOG00000015837	UPF2	100	77.647	Acanthochromis_polyacanthus
ENSMOCG00000008263	Upf2	100	97.089	ENSAMEG00000004586	UPF2	100	97.089	Ailuropoda_melanoleuca
ENSMOCG00000008263	Upf2	99	81.455	ENSACIG00000018078	UPF2	100	81.299	Amphilophus_citrinellus
ENSMOCG00000008263	Upf2	100	81.811	ENSAOCG00000016766	UPF2	100	81.733	Amphiprion_ocellaris
ENSMOCG00000008263	Upf2	100	81.889	ENSAPEG00000019084	UPF2	100	81.811	Amphiprion_percula
ENSMOCG00000008263	Upf2	100	81.712	ENSATEG00000021677	UPF2	99	81.606	Anabas_testudineus
ENSMOCG00000008263	Upf2	100	86.703	ENSAPLG00000010287	UPF2	90	91.478	Anas_platyrhynchos
ENSMOCG00000008263	Upf2	100	91.267	ENSACAG00000009259	UPF2	100	91.188	Anolis_carolinensis
ENSMOCG00000008263	Upf2	99	87.244	ENSANAG00000028451	UPF2	99	85.276	Aotus_nancymaae
ENSMOCG00000008263	Upf2	100	80.938	ENSACLG00000012696	UPF2	100	81.406	Astatotilapia_calliptera
ENSMOCG00000008263	Upf2	99	83.320	ENSAMXG00000013700	UPF2	99	82.146	Astyanax_mexicanus
ENSMOCG00000008263	Upf2	100	96.932	ENSBTAG00000000288	UPF2	100	96.932	Bos_taurus
ENSMOCG00000008263	Upf2	100	96.696	ENSCJAG00000020685	UPF2	100	96.696	Callithrix_jacchus
ENSMOCG00000008263	Upf2	100	97.168	ENSCAFG00000004839	UPF2	100	97.168	Canis_familiaris
ENSMOCG00000008263	Upf2	97	99.507	ENSCAFG00020005882	UPF2	98	97.033	Canis_lupus_dingo
ENSMOCG00000008263	Upf2	100	97.010	ENSCHIG00000020359	UPF2	100	97.010	Capra_hircus
ENSMOCG00000008263	Upf2	100	96.538	ENSTSYG00000000935	UPF2	100	96.538	Carlito_syrichta
ENSMOCG00000008263	Upf2	91	85.714	ENSCAPG00000016658	UPF2	95	85.800	Cavia_aperea
ENSMOCG00000008263	Upf2	99	94.370	ENSCPOG00000008809	UPF2	100	94.845	Cavia_porcellus
ENSMOCG00000008263	Upf2	100	91.109	ENSCCAG00000035991	UPF2	100	90.795	Cebus_capucinus
ENSMOCG00000008263	Upf2	100	96.934	ENSCATG00000032679	UPF2	100	96.934	Cercocebus_atys
ENSMOCG00000008263	Upf2	100	96.929	ENSCLAG00000011434	UPF2	100	96.929	Chinchilla_lanigera
ENSMOCG00000008263	Upf2	100	96.934	ENSCSAG00000013372	UPF2	100	96.934	Chlorocebus_sabaeus
ENSMOCG00000008263	Upf2	87	99.107	ENSCHOG00000000422	UPF2	89	99.107	Choloepus_hoffmanni
ENSMOCG00000008263	Upf2	99	92.666	ENSCPBG00000027823	UPF2	100	92.429	Chrysemys_picta_bellii
ENSMOCG00000008263	Upf2	79	49.409	ENSCSAVG00000007772	-	99	48.515	Ciona_savignyi
ENSMOCG00000008263	Upf2	99	90.618	ENSCANG00000040396	UPF2	100	89.367	Colobus_angolensis_palliatus
ENSMOCG00000008263	Upf2	100	98.897	ENSCGRG00001019347	Upf2	100	98.897	Cricetulus_griseus_chok1gshd
ENSMOCG00000008263	Upf2	100	98.897	ENSCGRG00000017993	Upf2	100	98.897	Cricetulus_griseus_crigri
ENSMOCG00000008263	Upf2	99	77.305	ENSCSEG00000003520	UPF2	80	78.507	Cynoglossus_semilaevis
ENSMOCG00000008263	Upf2	99	81.275	ENSCVAG00000006167	UPF2	100	80.960	Cyprinodon_variegatus
ENSMOCG00000008263	Upf2	100	97.010	ENSDNOG00000018160	UPF2	100	97.010	Dasypus_novemcinctus
ENSMOCG00000008263	Upf2	100	97.323	ENSDORG00000002478	Upf2	100	97.323	Dipodomys_ordii
ENSMOCG00000008263	Upf2	89	36.672	FBgn0029992	Upf2	80	43.750	Drosophila_melanogaster
ENSMOCG00000008263	Upf2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSMOCG00000008263	Upf2	69	68.460	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSMOCG00000008263	Upf2	100	96.929	ENSEASG00005019274	UPF2	100	96.929	Equus_asinus_asinus
ENSMOCG00000008263	Upf2	100	97.008	ENSECAG00000017022	UPF2	100	97.008	Equus_caballus
ENSMOCG00000008263	Upf2	82	91.693	ENSEEUG00000007819	UPF2	82	91.054	Erinaceus_europaeus
ENSMOCG00000008263	Upf2	99	79.969	ENSELUG00000012014	UPF2	100	80.934	Esox_lucius
ENSMOCG00000008263	Upf2	100	98.895	ENSFCAG00000005785	UPF2	100	96.853	Felis_catus
ENSMOCG00000008263	Upf2	100	92.132	ENSFALG00000001889	UPF2	98	92.998	Ficedula_albicollis
ENSMOCG00000008263	Upf2	100	96.927	ENSFDAG00000014348	UPF2	100	96.927	Fukomys_damarensis
ENSMOCG00000008263	Upf2	99	81.481	ENSFHEG00000009826	UPF2	100	81.245	Fundulus_heteroclitus
ENSMOCG00000008263	Upf2	91	83.391	ENSGMOG00000005557	UPF2	91	83.391	Gadus_morhua
ENSMOCG00000008263	Upf2	100	92.846	ENSGALG00000033772	UPF2	100	91.981	Gallus_gallus
ENSMOCG00000008263	Upf2	100	79.766	ENSGAFG00000020867	UPF2	100	80.391	Gambusia_affinis
ENSMOCG00000008263	Upf2	91	84.370	ENSGACG00000001080	UPF2	100	81.455	Gasterosteus_aculeatus
ENSMOCG00000008263	Upf2	100	92.604	ENSGAGG00000002700	UPF2	100	92.840	Gopherus_agassizii
ENSMOCG00000008263	Upf2	100	96.698	ENSGGOG00000001479	UPF2	100	96.698	Gorilla_gorilla
ENSMOCG00000008263	Upf2	100	80.781	ENSHBUG00000004249	UPF2	100	81.377	Haplochromis_burtoni
ENSMOCG00000008263	Upf2	99	85.658	ENSHGLG00000003822	-	99	83.991	Heterocephalus_glaber_female
ENSMOCG00000008263	Upf2	100	96.772	ENSHGLG00000015176	-	100	96.772	Heterocephalus_glaber_female
ENSMOCG00000008263	Upf2	99	93.607	ENSHGLG00100010036	UPF2	100	93.607	Heterocephalus_glaber_male
ENSMOCG00000008263	Upf2	100	80.093	ENSHCOG00000004025	UPF2	99	79.782	Hippocampus_comes
ENSMOCG00000008263	Upf2	100	81.265	ENSIPUG00000015524	UPF2	100	82.656	Ictalurus_punctatus
ENSMOCG00000008263	Upf2	100	97.480	ENSSTOG00000013075	UPF2	100	97.480	Ictidomys_tridecemlineatus
ENSMOCG00000008263	Upf2	100	96.378	ENSJJAG00000004913	Upf2	100	96.378	Jaculus_jaculus
ENSMOCG00000008263	Upf2	99	81.191	ENSKMAG00000001071	UPF2	100	81.225	Kryptolebias_marmoratus
ENSMOCG00000008263	Upf2	100	81.946	ENSLBEG00000016394	-	99	81.839	Labrus_bergylta
ENSMOCG00000008263	Upf2	80	81.201	ENSLBEG00000000728	-	93	81.299	Labrus_bergylta
ENSMOCG00000008263	Upf2	99	79.451	ENSLACG00000015945	UPF2	100	78.902	Latimeria_chalumnae
ENSMOCG00000008263	Upf2	99	84.555	ENSLOCG00000015698	UPF2	100	84.870	Lepisosteus_oculatus
ENSMOCG00000008263	Upf2	100	96.855	ENSMFAG00000043865	UPF2	100	96.855	Macaca_fascicularis
ENSMOCG00000008263	Upf2	100	96.855	ENSMMUG00000008241	UPF2	100	96.855	Macaca_mulatta
ENSMOCG00000008263	Upf2	81	96.585	ENSMNEG00000008062	UPF2	100	96.585	Macaca_nemestrina
ENSMOCG00000008263	Upf2	95	97.826	ENSMLEG00000036120	UPF2	100	97.826	Mandrillus_leucophaeus
ENSMOCG00000008263	Upf2	100	81.712	ENSMAMG00000018276	UPF2	100	81.684	Mastacembelus_armatus
ENSMOCG00000008263	Upf2	100	80.938	ENSMZEG00005021595	UPF2	100	81.406	Maylandia_zebra
ENSMOCG00000008263	Upf2	99	92.205	ENSMGAG00000004573	UPF2	99	91.496	Meleagris_gallopavo
ENSMOCG00000008263	Upf2	100	96.612	ENSMAUG00000016512	Upf2	100	96.612	Mesocricetus_auratus
ENSMOCG00000008263	Upf2	95	98.469	ENSMICG00000001716	UPF2	99	98.469	Microcebus_murinus
ENSMOCG00000008263	Upf2	99	79.264	ENSMMOG00000006528	UPF2	100	79.199	Mola_mola
ENSMOCG00000008263	Upf2	100	93.784	ENSMODG00000016794	UPF2	100	94.650	Monodelphis_domestica
ENSMOCG00000008263	Upf2	99	81.142	ENSMALG00000002663	UPF2	100	81.505	Monopterus_albus
ENSMOCG00000008263	Upf2	100	97.794	MGP_CAROLIEiJ_G0023157	Upf2	100	98.425	Mus_caroli
ENSMOCG00000008263	Upf2	100	98.266	ENSMUSG00000043241	Upf2	100	98.266	Mus_musculus
ENSMOCG00000008263	Upf2	100	98.345	MGP_PahariEiJ_G0019217	Upf2	100	98.664	Mus_pahari
ENSMOCG00000008263	Upf2	100	98.503	MGP_SPRETEiJ_G0024075	Upf2	100	98.855	Mus_spretus
ENSMOCG00000008263	Upf2	100	97.168	ENSMPUG00000001064	UPF2	100	97.168	Mustela_putorius_furo
ENSMOCG00000008263	Upf2	99	97.015	ENSMLUG00000000228	UPF2	100	97.015	Myotis_lucifugus
ENSMOCG00000008263	Upf2	100	80.938	ENSNBRG00000013629	UPF2	100	81.406	Neolamprologus_brichardi
ENSMOCG00000008263	Upf2	100	96.855	ENSNLEG00000012058	UPF2	100	96.855	Nomascus_leucogenys
ENSMOCG00000008263	Upf2	56	96.923	ENSMEUG00000002180	-	54	96.923	Notamacropus_eugenii
ENSMOCG00000008263	Upf2	76	98.592	ENSOPRG00000006801	-	77	98.592	Ochotona_princeps
ENSMOCG00000008263	Upf2	100	96.850	ENSODEG00000001290	UPF2	100	96.850	Octodon_degus
ENSMOCG00000008263	Upf2	100	80.938	ENSONIG00000017991	UPF2	100	81.406	Oreochromis_niloticus
ENSMOCG00000008263	Upf2	99	96.314	ENSOCUG00000006230	UPF2	100	96.314	Oryctolagus_cuniculus
ENSMOCG00000008263	Upf2	100	81.089	ENSORLG00000017189	UPF2	100	80.562	Oryzias_latipes
ENSMOCG00000008263	Upf2	100	81.089	ENSORLG00020005969	UPF2	100	80.562	Oryzias_latipes_hni
ENSMOCG00000008263	Upf2	100	81.089	ENSORLG00015005713	UPF2	100	80.562	Oryzias_latipes_hsok
ENSMOCG00000008263	Upf2	99	77.301	ENSOMEG00000023420	UPF2	98	77.621	Oryzias_melastigma
ENSMOCG00000008263	Upf2	100	97.246	ENSOGAG00000005796	UPF2	100	97.246	Otolemur_garnettii
ENSMOCG00000008263	Upf2	100	96.858	ENSOARG00000014587	UPF2	100	96.858	Ovis_aries
ENSMOCG00000008263	Upf2	99	92.723	ENSPPAG00000037953	UPF2	100	92.356	Pan_paniscus
ENSMOCG00000008263	Upf2	100	96.853	ENSPPRG00000000690	UPF2	100	96.853	Panthera_pardus
ENSMOCG00000008263	Upf2	100	96.853	ENSPTIG00000008867	UPF2	100	96.853	Panthera_tigris_altaica
ENSMOCG00000008263	Upf2	100	96.698	ENSPTRG00000002291	UPF2	100	96.698	Pan_troglodytes
ENSMOCG00000008263	Upf2	100	96.855	ENSPANG00000023399	UPF2	100	96.855	Papio_anubis
ENSMOCG00000008263	Upf2	100	80.562	ENSPKIG00000025502	UPF2	100	80.484	Paramormyrops_kingsleyae
ENSMOCG00000008263	Upf2	59	91.235	ENSPSIG00000015158	UPF2	95	91.633	Pelodiscus_sinensis
ENSMOCG00000008263	Upf2	99	78.538	ENSPMGG00000005259	UPF2	100	79.150	Periophthalmus_magnuspinnatus
ENSMOCG00000008263	Upf2	93	96.501	ENSPEMG00000015731	Upf2	99	96.210	Peromyscus_maniculatus_bairdii
ENSMOCG00000008263	Upf2	100	94.807	ENSPCIG00000006656	UPF2	100	94.807	Phascolarctos_cinereus
ENSMOCG00000008263	Upf2	100	79.766	ENSPFOG00000017118	UPF2	100	80.625	Poecilia_formosa
ENSMOCG00000008263	Upf2	100	79.766	ENSPLAG00000005094	UPF2	100	80.625	Poecilia_latipinna
ENSMOCG00000008263	Upf2	100	79.766	ENSPMEG00000017009	UPF2	100	80.625	Poecilia_mexicana
ENSMOCG00000008263	Upf2	99	79.765	ENSPREG00000021880	UPF2	100	80.673	Poecilia_reticulata
ENSMOCG00000008263	Upf2	66	97.847	ENSPPYG00000002089	-	100	97.847	Pongo_abelii
ENSMOCG00000008263	Upf2	100	82.219	ENSPCAG00000000684	UPF2	100	81.983	Procavia_capensis
ENSMOCG00000008263	Upf2	99	94.322	ENSPCOG00000021656	UPF2	100	94.479	Propithecus_coquereli
ENSMOCG00000008263	Upf2	100	89.072	ENSPVAG00000017286	UPF2	100	88.836	Pteropus_vampyrus
ENSMOCG00000008263	Upf2	99	78.482	ENSPNYG00000017096	UPF2	100	78.951	Pundamilia_nyererei
ENSMOCG00000008263	Upf2	100	83.841	ENSPNAG00000009357	UPF2	100	82.592	Pygocentrus_nattereri
ENSMOCG00000008263	Upf2	99	91.903	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSMOCG00000008263	Upf2	99	96.057	ENSRBIG00000037780	UPF2	100	96.057	Rhinopithecus_bieti
ENSMOCG00000008263	Upf2	100	96.932	ENSRROG00000043547	UPF2	100	96.932	Rhinopithecus_roxellana
ENSMOCG00000008263	Upf2	100	96.772	ENSSBOG00000020012	UPF2	100	96.772	Saimiri_boliviensis_boliviensis
ENSMOCG00000008263	Upf2	100	80.811	ENSSFOG00015023788	upf2	100	80.889	Scleropages_formosus
ENSMOCG00000008263	Upf2	90	83.073	ENSSMAG00000007637	UPF2	100	79.225	Scophthalmus_maximus
ENSMOCG00000008263	Upf2	100	81.797	ENSSDUG00000017244	UPF2	99	81.967	Seriola_dumerili
ENSMOCG00000008263	Upf2	99	80.063	ENSSLDG00000016866	UPF2	82	82.874	Seriola_lalandi_dorsalis
ENSMOCG00000008263	Upf2	100	92.998	ENSSARG00000008615	UPF2	100	94.099	Sorex_araneus
ENSMOCG00000008263	Upf2	99	89.370	ENSSPUG00000014544	UPF2	99	89.370	Sphenodon_punctatus
ENSMOCG00000008263	Upf2	68	97.814	ENSSSCG00000011117	-	100	97.814	Sus_scrofa
ENSMOCG00000008263	Upf2	99	92.666	ENSTGUG00000002163	-	100	92.981	Taeniopygia_guttata
ENSMOCG00000008263	Upf2	100	81.216	ENSTRUG00000007519	UPF2	99	81.109	Takifugu_rubripes
ENSMOCG00000008263	Upf2	100	79.611	ENSTNIG00000004453	UPF2	100	79.345	Tetraodon_nigroviridis
ENSMOCG00000008263	Upf2	93	89.822	ENSTBEG00000012679	UPF2	93	88.634	Tupaia_belangeri
ENSMOCG00000008263	Upf2	100	96.929	ENSTTRG00000016388	UPF2	100	96.929	Tursiops_truncatus
ENSMOCG00000008263	Upf2	95	99.306	ENSUAMG00000023560	UPF2	100	96.973	Ursus_americanus
ENSMOCG00000008263	Upf2	100	97.010	ENSUMAG00000012953	UPF2	95	97.010	Ursus_maritimus
ENSMOCG00000008263	Upf2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMOCG00000008263	Upf2	100	97.089	ENSVVUG00000006166	UPF2	100	97.089	Vulpes_vulpes
ENSMOCG00000008263	Upf2	100	82.740	ENSXETG00000033103	UPF2	100	82.508	Xenopus_tropicalis
ENSMOCG00000008263	Upf2	99	79.499	ENSXCOG00000011604	UPF2	100	80.595	Xiphophorus_couchianus
ENSMOCG00000008263	Upf2	100	79.688	ENSXMAG00000017209	UPF2	100	80.547	Xiphophorus_maculatus