EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000008423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 3116 bases
Position: chrJH996449.1:936325-939440
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008426	EST1	PF10374.9	3.1e-19	1	1
ENSMOCP00000008426	EST1_DNA_bind	PF10373.9	6.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010837	-	1716	-	ENSMOCP00000008426	571 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000008423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000008423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000008423	-	70	54.750	ENSMOCG00000016590	Smg5	54	45.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000008423	-	68	51.238	ENSAOCG00000019483	smg5	51	44.551	Amphiprion_ocellaris
ENSMOCG00000008423	-	68	51.238	ENSAPEG00000022949	smg5	52	44.742	Amphiprion_percula
ENSMOCG00000008423	-	82	46.377	ENSATEG00000005348	smg5	50	44.788	Anabas_testudineus
ENSMOCG00000008423	-	62	47.721	ENSACAG00000015999	-	66	60.474	Anolis_carolinensis
ENSMOCG00000008423	-	93	69.017	ENSBTAG00000021747	-	55	68.852	Bos_taurus
ENSMOCG00000008423	-	93	68.089	ENSCHIG00000006323	-	56	67.942	Capra_hircus
ENSMOCG00000008423	-	75	48.394	ENSCPBG00000025848	SMG5	51	46.906	Chrysemys_picta_bellii
ENSMOCG00000008423	-	92	87.786	ENSCGRG00001000584	-	96	87.786	Cricetulus_griseus_chok1gshd
ENSMOCG00000008423	-	76	90.575	ENSCGRG00000009566	-	95	90.575	Cricetulus_griseus_crigri
ENSMOCG00000008423	-	89	51.953	ENSDNOG00000039862	-	54	51.367	Dasypus_novemcinctus
ENSMOCG00000008423	-	86	48.367	ENSETEG00000010336	SMG5	53	48.290	Echinops_telfairi
ENSMOCG00000008423	-	88	42.407	ENSELUG00000012585	smg5	51	44.186	Esox_lucius
ENSMOCG00000008423	-	84	50.305	ENSFALG00000001166	-	81	49.592	Ficedula_albicollis
ENSMOCG00000008423	-	84	45.000	ENSFHEG00000013939	smg5	54	45.652	Fundulus_heteroclitus
ENSMOCG00000008423	-	73	49.299	ENSLBEG00000002145	smg5	50	44.767	Labrus_bergylta
ENSMOCG00000008423	-	73	48.848	ENSMZEG00005015815	smg5	50	44.894	Maylandia_zebra
ENSMOCG00000008423	-	95	84.743	ENSMAUG00000000043	-	97	84.743	Mesocricetus_auratus
ENSMOCG00000008423	-	84	49.190	ENSMODG00000016901	SMG5	54	48.497	Monodelphis_domestica
ENSMOCG00000008423	-	67	38.046	ENSMODG00000021488	-	95	38.046	Monodelphis_domestica
ENSMOCG00000008423	-	71	54.074	MGP_CAROLIEiJ_G0025163	Smg5	100	58.333	Mus_caroli
ENSMOCG00000008423	-	71	54.074	ENSMUSG00000001415	Smg5	99	58.333	Mus_musculus
ENSMOCG00000008423	-	71	54.321	MGP_PahariEiJ_G0026606	Smg5	100	58.333	Mus_pahari
ENSMOCG00000008423	-	71	54.074	MGP_SPRETEiJ_G0026104	Smg5	100	58.333	Mus_spretus
ENSMOCG00000008423	-	95	81.952	ENSNGAG00000012101	-	55	81.952	Nannospalax_galili
ENSMOCG00000008423	-	94	61.835	ENSOCUG00000023338	-	60	61.835	Oryctolagus_cuniculus
ENSMOCG00000008423	-	68	51.741	ENSOMEG00000021330	smg5	72	45.652	Oryzias_melastigma
ENSMOCG00000008423	-	93	67.593	ENSOARG00000011963	-	56	67.455	Ovis_aries
ENSMOCG00000008423	-	85	43.160	ENSPKIG00000009402	smg5	51	43.545	Paramormyrops_kingsleyae
ENSMOCG00000008423	-	84	49.187	ENSPSIG00000015198	SMG5	54	46.125	Pelodiscus_sinensis
ENSMOCG00000008423	-	95	90.792	ENSPEMG00000010022	-	95	90.792	Peromyscus_maniculatus_bairdii
ENSMOCG00000008423	-	81	39.186	ENSSHAG00000000935	-	59	40.528	Sarcophilus_harrisii
ENSMOCG00000008423	-	68	51.256	ENSSFOG00015024175	smg5	56	43.056	Scleropages_formosus
ENSMOCG00000008423	-	84	38.506	ENSSARG00000012484	SMG5	53	38.353	Sorex_araneus
ENSMOCG00000008423	-	86	49.900	ENSSSCG00000006490	-	56	46.630	Sus_scrofa
ENSMOCG00000008423	-	97	55.595	ENSSSCG00000037182	-	97	55.595	Sus_scrofa