EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000008438 (Gene tree)
Gene ID: 101978862
Gene Symbol: Sf3a1
Alias: 1200014H24Rik|5930416L09Rik
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 22653 bases
Position: chrJH996436.1:11189253-11211905
Accession: 101978862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008443	PRP21_like_P	PF12230.8	8.4e-52	1	1
ENSMOCP00000008443	Surp	PF01805.20	6.3e-46	1	2
ENSMOCP00000008443	Surp	PF01805.20	6.3e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000010860	-	3110	XM_005366131	ENSMOCP00000008443	793 (aa)	XP_005366188	UPI00038C1D51

Gene Model

Click here to download ENSMOCG00000008438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000008438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000008438	Sf3a1	100	98.361	ENSG00000099995	SF3A1	100	98.361	Homo_sapiens
ENSMOCG00000008438	Sf3a1	100	83.396	ENSAPOG00000020465	sf3a1	97	86.013	Acanthochromis_polyacanthus
ENSMOCG00000008438	Sf3a1	100	97.987	ENSAMEG00000007737	SF3A1	100	97.987	Ailuropoda_melanoleuca
ENSMOCG00000008438	Sf3a1	100	84.277	ENSACIG00000020672	sf3a1	98	85.807	Amphilophus_citrinellus
ENSMOCG00000008438	Sf3a1	100	82.750	ENSAOCG00000003060	sf3a1	97	85.752	Amphiprion_ocellaris
ENSMOCG00000008438	Sf3a1	100	82.875	ENSAPEG00000010735	sf3a1	97	85.882	Amphiprion_percula
ENSMOCG00000008438	Sf3a1	97	85.306	ENSATEG00000021201	sf3a1	98	84.704	Anabas_testudineus
ENSMOCG00000008438	Sf3a1	95	94.055	ENSAPLG00000009057	SF3A1	99	93.144	Anas_platyrhynchos
ENSMOCG00000008438	Sf3a1	100	85.714	ENSACAG00000009415	SF3A1	100	87.069	Anolis_carolinensis
ENSMOCG00000008438	Sf3a1	100	98.487	ENSANAG00000032045	SF3A1	100	98.487	Aotus_nancymaae
ENSMOCG00000008438	Sf3a1	100	83.879	ENSACLG00000012622	sf3a1	99	84.891	Astatotilapia_calliptera
ENSMOCG00000008438	Sf3a1	99	83.186	ENSAMXG00000005382	sf3a1	99	84.041	Astyanax_mexicanus
ENSMOCG00000008438	Sf3a1	100	98.739	ENSBTAG00000003390	SF3A1	100	98.739	Bos_taurus
ENSMOCG00000008438	Sf3a1	84	43.627	WBGene00004188	prp-21	94	43.682	Caenorhabditis_elegans
ENSMOCG00000008438	Sf3a1	100	98.613	ENSCJAG00000010370	SF3A1	100	98.613	Callithrix_jacchus
ENSMOCG00000008438	Sf3a1	100	98.487	ENSCAFG00000012559	SF3A1	100	98.487	Canis_familiaris
ENSMOCG00000008438	Sf3a1	100	98.487	ENSCAFG00020000838	SF3A1	100	98.487	Canis_lupus_dingo
ENSMOCG00000008438	Sf3a1	100	98.613	ENSCHIG00000018642	SF3A1	100	98.613	Capra_hircus
ENSMOCG00000008438	Sf3a1	100	98.865	ENSTSYG00000004739	SF3A1	100	98.865	Carlito_syrichta
ENSMOCG00000008438	Sf3a1	94	80.908	ENSCAPG00000015414	SF3A1	98	80.908	Cavia_aperea
ENSMOCG00000008438	Sf3a1	100	98.361	ENSCPOG00000014589	SF3A1	100	98.361	Cavia_porcellus
ENSMOCG00000008438	Sf3a1	100	98.487	ENSCCAG00000032006	SF3A1	100	98.487	Cebus_capucinus
ENSMOCG00000008438	Sf3a1	100	98.739	ENSCATG00000029241	SF3A1	100	98.739	Cercocebus_atys
ENSMOCG00000008438	Sf3a1	100	97.982	ENSCLAG00000006508	SF3A1	100	97.982	Chinchilla_lanigera
ENSMOCG00000008438	Sf3a1	100	98.613	ENSCSAG00000009470	SF3A1	100	98.613	Chlorocebus_sabaeus
ENSMOCG00000008438	Sf3a1	61	98.165	ENSCHOG00000005201	SF3A1	69	98.165	Choloepus_hoffmanni
ENSMOCG00000008438	Sf3a1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSMOCG00000008438	Sf3a1	96	53.040	ENSCING00000008526	-	66	58.238	Ciona_intestinalis
ENSMOCG00000008438	Sf3a1	96	52.000	ENSCSAVG00000005608	-	90	65.179	Ciona_savignyi
ENSMOCG00000008438	Sf3a1	100	98.613	ENSCANG00000033564	SF3A1	100	98.613	Colobus_angolensis_palliatus
ENSMOCG00000008438	Sf3a1	100	99.622	ENSCGRG00001008933	Sf3a1	100	99.622	Cricetulus_griseus_chok1gshd
ENSMOCG00000008438	Sf3a1	100	99.622	ENSCGRG00000006127	Sf3a1	100	99.622	Cricetulus_griseus_crigri
ENSMOCG00000008438	Sf3a1	100	81.658	ENSCSEG00000010792	sf3a1	98	83.095	Cynoglossus_semilaevis
ENSMOCG00000008438	Sf3a1	100	82.893	ENSCVAG00000004560	sf3a1	97	83.963	Cyprinodon_variegatus
ENSMOCG00000008438	Sf3a1	100	82.161	ENSDARG00000041887	sf3a1	97	84.485	Danio_rerio
ENSMOCG00000008438	Sf3a1	100	98.239	ENSDNOG00000010629	SF3A1	100	98.239	Dasypus_novemcinctus
ENSMOCG00000008438	Sf3a1	100	98.613	ENSDORG00000005613	Sf3a1	100	98.613	Dipodomys_ordii
ENSMOCG00000008438	Sf3a1	79	61.495	FBgn0266917	Sf3a1	84	59.386	Drosophila_melanogaster
ENSMOCG00000008438	Sf3a1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSMOCG00000008438	Sf3a1	98	66.102	ENSEBUG00000001285	sf3a1	77	67.337	Eptatretus_burgeri
ENSMOCG00000008438	Sf3a1	100	98.865	ENSEASG00005010254	SF3A1	100	98.865	Equus_asinus_asinus
ENSMOCG00000008438	Sf3a1	100	98.865	ENSECAG00000023962	SF3A1	100	98.865	Equus_caballus
ENSMOCG00000008438	Sf3a1	73	93.834	ENSEEUG00000003159	SF3A1	82	93.762	Erinaceus_europaeus
ENSMOCG00000008438	Sf3a1	100	82.206	ENSELUG00000022578	sf3a1	97	83.333	Esox_lucius
ENSMOCG00000008438	Sf3a1	100	98.487	ENSFCAG00000011932	SF3A1	100	98.487	Felis_catus
ENSMOCG00000008438	Sf3a1	95	93.122	ENSFALG00000006944	SF3A1	100	91.814	Ficedula_albicollis
ENSMOCG00000008438	Sf3a1	100	98.487	ENSFDAG00000009560	SF3A1	100	98.487	Fukomys_damarensis
ENSMOCG00000008438	Sf3a1	100	84.025	ENSFHEG00000010866	sf3a1	97	85.137	Fundulus_heteroclitus
ENSMOCG00000008438	Sf3a1	100	80.730	ENSGMOG00000016024	sf3a1	97	80.804	Gadus_morhua
ENSMOCG00000008438	Sf3a1	95	94.048	ENSGALG00000007937	SF3A1	100	92.317	Gallus_gallus
ENSMOCG00000008438	Sf3a1	100	83.396	ENSGAFG00000009111	sf3a1	97	84.444	Gambusia_affinis
ENSMOCG00000008438	Sf3a1	100	82.116	ENSGACG00000011893	sf3a1	97	83.377	Gasterosteus_aculeatus
ENSMOCG00000008438	Sf3a1	96	91.064	ENSGAGG00000000762	SF3A1	99	91.196	Gopherus_agassizii
ENSMOCG00000008438	Sf3a1	100	98.361	ENSGGOG00000012631	SF3A1	100	98.361	Gorilla_gorilla
ENSMOCG00000008438	Sf3a1	100	83.879	ENSHBUG00000015795	sf3a1	99	84.891	Haplochromis_burtoni
ENSMOCG00000008438	Sf3a1	100	98.739	ENSHGLG00000007907	SF3A1	100	98.739	Heterocephalus_glaber_female
ENSMOCG00000008438	Sf3a1	100	98.739	ENSHGLG00100013799	SF3A1	100	98.739	Heterocephalus_glaber_male
ENSMOCG00000008438	Sf3a1	100	80.126	ENSHCOG00000015423	sf3a1	99	80.516	Hippocampus_comes
ENSMOCG00000008438	Sf3a1	96	82.422	ENSIPUG00000002470	sf3a1	98	82.682	Ictalurus_punctatus
ENSMOCG00000008438	Sf3a1	100	98.991	ENSSTOG00000013892	SF3A1	100	98.991	Ictidomys_tridecemlineatus
ENSMOCG00000008438	Sf3a1	100	98.741	ENSJJAG00000022566	Sf3a1	100	98.741	Jaculus_jaculus
ENSMOCG00000008438	Sf3a1	100	82.893	ENSKMAG00000002400	sf3a1	98	84.635	Kryptolebias_marmoratus
ENSMOCG00000008438	Sf3a1	100	82.264	ENSLBEG00000022974	sf3a1	97	83.791	Labrus_bergylta
ENSMOCG00000008438	Sf3a1	100	87.327	ENSLACG00000003565	SF3A1	97	88.411	Latimeria_chalumnae
ENSMOCG00000008438	Sf3a1	100	84.962	ENSLOCG00000008251	sf3a1	97	86.623	Lepisosteus_oculatus
ENSMOCG00000008438	Sf3a1	100	98.361	ENSLAFG00000000448	SF3A1	100	98.361	Loxodonta_africana
ENSMOCG00000008438	Sf3a1	98	61.656	ENSLAFG00000026032	-	97	61.697	Loxodonta_africana
ENSMOCG00000008438	Sf3a1	100	98.487	ENSMFAG00000031979	SF3A1	100	98.487	Macaca_fascicularis
ENSMOCG00000008438	Sf3a1	100	98.487	ENSMMUG00000005547	SF3A1	100	98.487	Macaca_mulatta
ENSMOCG00000008438	Sf3a1	100	98.361	ENSMNEG00000037229	SF3A1	100	98.361	Macaca_nemestrina
ENSMOCG00000008438	Sf3a1	100	98.613	ENSMLEG00000041908	SF3A1	100	98.613	Mandrillus_leucophaeus
ENSMOCG00000008438	Sf3a1	97	85.382	ENSMAMG00000006460	sf3a1	97	85.511	Mastacembelus_armatus
ENSMOCG00000008438	Sf3a1	100	83.879	ENSMZEG00005009633	sf3a1	99	84.891	Maylandia_zebra
ENSMOCG00000008438	Sf3a1	95	94.048	ENSMGAG00000001330	SF3A1	100	93.135	Meleagris_gallopavo
ENSMOCG00000008438	Sf3a1	92	96.038	ENSMAUG00000020317	Sf3a1	94	96.038	Mesocricetus_auratus
ENSMOCG00000008438	Sf3a1	100	98.361	ENSMICG00000010038	SF3A1	100	98.361	Microcebus_murinus
ENSMOCG00000008438	Sf3a1	100	81.006	ENSMMOG00000015588	sf3a1	98	81.853	Mola_mola
ENSMOCG00000008438	Sf3a1	100	97.478	ENSMODG00000009270	SF3A1	100	97.478	Monodelphis_domestica
ENSMOCG00000008438	Sf3a1	100	84.383	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSMOCG00000008438	Sf3a1	100	98.739	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.739	Mus_caroli
ENSMOCG00000008438	Sf3a1	100	98.739	ENSMUSG00000002129	Sf3a1	100	98.739	Mus_musculus
ENSMOCG00000008438	Sf3a1	100	98.739	MGP_PahariEiJ_G0016862	Sf3a1	100	98.739	Mus_pahari
ENSMOCG00000008438	Sf3a1	100	98.739	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.739	Mus_spretus
ENSMOCG00000008438	Sf3a1	100	98.487	ENSMPUG00000013144	SF3A1	100	98.487	Mustela_putorius_furo
ENSMOCG00000008438	Sf3a1	100	98.613	ENSMLUG00000002139	SF3A1	100	98.613	Myotis_lucifugus
ENSMOCG00000008438	Sf3a1	100	98.991	ENSNGAG00000016977	Sf3a1	100	98.991	Nannospalax_galili
ENSMOCG00000008438	Sf3a1	100	83.396	ENSNBRG00000016642	sf3a1	99	84.547	Neolamprologus_brichardi
ENSMOCG00000008438	Sf3a1	100	98.613	ENSNLEG00000003686	SF3A1	100	98.613	Nomascus_leucogenys
ENSMOCG00000008438	Sf3a1	96	87.763	ENSMEUG00000008741	SF3A1	100	87.763	Notamacropus_eugenii
ENSMOCG00000008438	Sf3a1	100	97.856	ENSOPRG00000016636	SF3A1	100	97.856	Ochotona_princeps
ENSMOCG00000008438	Sf3a1	100	98.487	ENSODEG00000002571	SF3A1	100	98.487	Octodon_degus
ENSMOCG00000008438	Sf3a1	100	83.730	ENSONIG00000010848	sf3a1	99	84.271	Oreochromis_niloticus
ENSMOCG00000008438	Sf3a1	100	98.361	ENSOCUG00000007633	SF3A1	100	98.361	Oryctolagus_cuniculus
ENSMOCG00000008438	Sf3a1	96	82.152	ENSORLG00000013050	sf3a1	98	83.962	Oryzias_latipes
ENSMOCG00000008438	Sf3a1	99	80.633	ENSORLG00020003236	sf3a1	96	82.199	Oryzias_latipes_hni
ENSMOCG00000008438	Sf3a1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSMOCG00000008438	Sf3a1	100	82.516	ENSOMEG00000013362	sf3a1	99	83.355	Oryzias_melastigma
ENSMOCG00000008438	Sf3a1	100	98.235	ENSOGAG00000012931	SF3A1	100	98.235	Otolemur_garnettii
ENSMOCG00000008438	Sf3a1	100	96.847	ENSOARG00000006849	SF3A1	100	96.847	Ovis_aries
ENSMOCG00000008438	Sf3a1	100	97.352	ENSPPAG00000041790	SF3A1	100	97.352	Pan_paniscus
ENSMOCG00000008438	Sf3a1	100	98.487	ENSPPRG00000004391	SF3A1	100	98.487	Panthera_pardus
ENSMOCG00000008438	Sf3a1	97	98.446	ENSPTIG00000000844	SF3A1	100	98.446	Panthera_tigris_altaica
ENSMOCG00000008438	Sf3a1	100	98.361	ENSPTRG00000014240	SF3A1	100	98.361	Pan_troglodytes
ENSMOCG00000008438	Sf3a1	100	98.613	ENSPANG00000020772	SF3A1	100	98.613	Papio_anubis
ENSMOCG00000008438	Sf3a1	82	92.308	ENSPSIG00000012803	SF3A1	96	94.329	Pelodiscus_sinensis
ENSMOCG00000008438	Sf3a1	96	84.293	ENSPMGG00000023096	sf3a1	100	83.508	Periophthalmus_magnuspinnatus
ENSMOCG00000008438	Sf3a1	100	99.874	ENSPEMG00000009494	Sf3a1	100	99.874	Peromyscus_maniculatus_bairdii
ENSMOCG00000008438	Sf3a1	69	78.040	ENSPMAG00000007139	-	90	79.252	Petromyzon_marinus
ENSMOCG00000008438	Sf3a1	100	97.226	ENSPCIG00000022692	SF3A1	100	97.226	Phascolarctos_cinereus
ENSMOCG00000008438	Sf3a1	100	74.749	ENSPFOG00000016768	sf3a1	93	78.367	Poecilia_formosa
ENSMOCG00000008438	Sf3a1	100	83.417	ENSPLAG00000017268	sf3a1	97	84.706	Poecilia_latipinna
ENSMOCG00000008438	Sf3a1	96	85.693	ENSPMEG00000019811	sf3a1	98	84.639	Poecilia_mexicana
ENSMOCG00000008438	Sf3a1	100	83.543	ENSPREG00000010347	sf3a1	97	85.229	Poecilia_reticulata
ENSMOCG00000008438	Sf3a1	100	98.613	ENSPPYG00000011707	SF3A1	100	98.613	Pongo_abelii
ENSMOCG00000008438	Sf3a1	57	99.170	ENSPCAG00000003266	SF3A1	57	99.170	Procavia_capensis
ENSMOCG00000008438	Sf3a1	100	98.613	ENSPCOG00000026630	SF3A1	100	98.613	Propithecus_coquereli
ENSMOCG00000008438	Sf3a1	100	94.578	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSMOCG00000008438	Sf3a1	100	83.879	ENSPNYG00000018706	sf3a1	99	84.891	Pundamilia_nyererei
ENSMOCG00000008438	Sf3a1	96	84.395	ENSPNAG00000003721	sf3a1	99	83.440	Pygocentrus_nattereri
ENSMOCG00000008438	Sf3a1	100	98.865	ENSRNOG00000005218	Sf3a1	100	98.865	Rattus_norvegicus
ENSMOCG00000008438	Sf3a1	100	98.487	ENSRBIG00000032167	SF3A1	100	98.487	Rhinopithecus_bieti
ENSMOCG00000008438	Sf3a1	100	98.487	ENSRROG00000044908	SF3A1	100	98.487	Rhinopithecus_roxellana
ENSMOCG00000008438	Sf3a1	97	94.574	ENSSBOG00000021960	SF3A1	100	98.818	Saimiri_boliviensis_boliviensis
ENSMOCG00000008438	Sf3a1	99	93.038	ENSSHAG00000003666	SF3A1	98	94.696	Sarcophilus_harrisii
ENSMOCG00000008438	Sf3a1	100	83.104	ENSSFOG00015004579	sf3a1	97	85.455	Scleropages_formosus
ENSMOCG00000008438	Sf3a1	100	81.384	ENSSMAG00000004275	sf3a1	97	83.137	Scophthalmus_maximus
ENSMOCG00000008438	Sf3a1	100	83.375	ENSSDUG00000022219	sf3a1	99	84.143	Seriola_dumerili
ENSMOCG00000008438	Sf3a1	100	83.375	ENSSLDG00000012642	sf3a1	99	84.143	Seriola_lalandi_dorsalis
ENSMOCG00000008438	Sf3a1	97	95.078	ENSSARG00000005960	SF3A1	100	95.078	Sorex_araneus
ENSMOCG00000008438	Sf3a1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSMOCG00000008438	Sf3a1	100	84.151	ENSSPAG00000011856	sf3a1	97	85.752	Stegastes_partitus
ENSMOCG00000008438	Sf3a1	100	98.613	ENSSSCG00000010002	SF3A1	100	98.613	Sus_scrofa
ENSMOCG00000008438	Sf3a1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.515	Taeniopygia_guttata
ENSMOCG00000008438	Sf3a1	100	81.533	ENSTRUG00000006118	sf3a1	97	82.092	Takifugu_rubripes
ENSMOCG00000008438	Sf3a1	64	81.413	ENSTNIG00000005713	sf3a1	81	84.821	Tetraodon_nigroviridis
ENSMOCG00000008438	Sf3a1	100	91.551	ENSTBEG00000012771	SF3A1	100	91.551	Tupaia_belangeri
ENSMOCG00000008438	Sf3a1	100	98.363	ENSTTRG00000001535	SF3A1	100	98.363	Tursiops_truncatus
ENSMOCG00000008438	Sf3a1	99	97.586	ENSUAMG00000006750	SF3A1	99	97.586	Ursus_americanus
ENSMOCG00000008438	Sf3a1	99	97.577	ENSUMAG00000016665	SF3A1	99	97.577	Ursus_maritimus
ENSMOCG00000008438	Sf3a1	100	98.487	ENSVVUG00000003075	SF3A1	100	98.487	Vulpes_vulpes
ENSMOCG00000008438	Sf3a1	100	85.947	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSMOCG00000008438	Sf3a1	100	83.145	ENSXCOG00000015653	sf3a1	97	84.183	Xiphophorus_couchianus
ENSMOCG00000008438	Sf3a1	100	83.270	ENSXMAG00000002753	sf3a1	97	84.314	Xiphophorus_maculatus