EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000008715 (Gene tree)
Gene ID: 102001575
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 12951 bases
Position: chrLG8:5744225-5757175
Accession: 102001575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000008673	RRM_1	PF00076.22	7.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000011201	-	1450	XM_005362803	ENSMOCP00000008673	237 (aa)	XP_005362860	UPI00038BCDA2
ENSMOCT00000011204	-	90	-	ENSMOCP00000008676	29 (aa)	-	UPI00021CF755

Gene Model

Click here to download ENSMOCG00000008715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000008715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000008715	Rbm38	55	38.889	ENSMOCG00000002286	Msi1	62	51.064
ENSMOCG00000008715	Rbm38	63	79.085	ENSMOCG00000016637	Rbm24	100	66.807

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000008715	Rbm38	100	92.469	ENSG00000132819	RBM38	100	93.388	Homo_sapiens
ENSMOCG00000008715	Rbm38	89	59.483	ENSAPOG00000003301	rbm38	72	66.120	Acanthochromis_polyacanthus
ENSMOCG00000008715	Rbm38	94	66.960	ENSAPOG00000009939	-	97	66.228	Acanthochromis_polyacanthus
ENSMOCG00000008715	Rbm38	94	65.217	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSMOCG00000008715	Rbm38	89	57.940	ENSACIG00000000010	rbm38	72	64.481	Amphilophus_citrinellus
ENSMOCG00000008715	Rbm38	95	66.087	ENSAOCG00000012559	RBM38	93	65.801	Amphiprion_ocellaris
ENSMOCG00000008715	Rbm38	89	59.483	ENSAOCG00000013497	-	72	66.120	Amphiprion_ocellaris
ENSMOCG00000008715	Rbm38	89	63.256	ENSAPEG00000013137	rbm38	88	61.860	Amphiprion_percula
ENSMOCG00000008715	Rbm38	94	61.317	ENSAPEG00000023581	-	97	62.295	Amphiprion_percula
ENSMOCG00000008715	Rbm38	91	62.389	ENSATEG00000016366	rbm38	75	68.927	Anabas_testudineus
ENSMOCG00000008715	Rbm38	94	61.728	ENSATEG00000016710	-	92	64.655	Anabas_testudineus
ENSMOCG00000008715	Rbm38	92	77.273	ENSACAG00000016238	RBM38	95	74.348	Anolis_carolinensis
ENSMOCG00000008715	Rbm38	91	94.444	ENSANAG00000031959	RBM38	100	94.444	Aotus_nancymaae
ENSMOCG00000008715	Rbm38	94	62.963	ENSACLG00000019514	-	97	63.934	Astatotilapia_calliptera
ENSMOCG00000008715	Rbm38	94	64.854	ENSAMXG00000015601	-	97	65.957	Astyanax_mexicanus
ENSMOCG00000008715	Rbm38	78	64.865	ENSAMXG00000038120	rbm38	73	68.208	Astyanax_mexicanus
ENSMOCG00000008715	Rbm38	100	89.958	ENSBTAG00000008105	RBM38	100	89.958	Bos_taurus
ENSMOCG00000008715	Rbm38	100	92.050	ENSCJAG00000019139	RBM38	100	93.388	Callithrix_jacchus
ENSMOCG00000008715	Rbm38	100	90.795	ENSCAFG00020021943	RBM38	100	90.795	Canis_lupus_dingo
ENSMOCG00000008715	Rbm38	100	89.121	ENSCHIG00000002609	RBM38	100	89.121	Capra_hircus
ENSMOCG00000008715	Rbm38	100	92.050	ENSCPOG00000012781	RBM38	100	92.050	Cavia_porcellus
ENSMOCG00000008715	Rbm38	100	92.050	ENSCCAG00000036872	RBM38	100	93.388	Cebus_capucinus
ENSMOCG00000008715	Rbm38	100	91.632	ENSCATG00000032133	RBM38	100	93.388	Cercocebus_atys
ENSMOCG00000008715	Rbm38	95	93.805	ENSCLAG00000005906	RBM38	98	93.805	Chinchilla_lanigera
ENSMOCG00000008715	Rbm38	100	91.632	ENSCSAG00000015503	RBM38	100	91.632	Chlorocebus_sabaeus
ENSMOCG00000008715	Rbm38	91	79.358	ENSCPBG00000024059	RBM38	100	78.899	Chrysemys_picta_bellii
ENSMOCG00000008715	Rbm38	99	70.168	ENSCANG00000030105	-	89	70.168	Colobus_angolensis_palliatus
ENSMOCG00000008715	Rbm38	100	97.046	ENSCGRG00001012928	Rbm38	100	97.046	Cricetulus_griseus_chok1gshd
ENSMOCG00000008715	Rbm38	93	68.421	ENSCSEG00000004701	-	96	66.222	Cynoglossus_semilaevis
ENSMOCG00000008715	Rbm38	62	69.333	ENSCSEG00000020943	rbm38	60	61.957	Cynoglossus_semilaevis
ENSMOCG00000008715	Rbm38	89	59.483	ENSCVAG00000015952	rbm38	91	59.227	Cyprinodon_variegatus
ENSMOCG00000008715	Rbm38	89	66.810	ENSCVAG00000005472	-	72	76.923	Cyprinodon_variegatus
ENSMOCG00000008715	Rbm38	89	64.126	ENSDARG00000058818	rbm38	74	72.778	Danio_rerio
ENSMOCG00000008715	Rbm38	91	86.574	ENSDNOG00000032004	RBM38	100	85.185	Dasypus_novemcinctus
ENSMOCG00000008715	Rbm38	100	89.540	ENSECAG00000007700	RBM38	100	89.540	Equus_caballus
ENSMOCG00000008715	Rbm38	100	87.500	ENSEEUG00000013489	RBM38	100	88.750	Erinaceus_europaeus
ENSMOCG00000008715	Rbm38	92	64.854	ENSELUG00000005849	-	95	64.557	Esox_lucius
ENSMOCG00000008715	Rbm38	84	65.174	ENSELUG00000000585	-	78	67.778	Esox_lucius
ENSMOCG00000008715	Rbm38	100	90.377	ENSFCAG00000042916	RBM38	100	91.736	Felis_catus
ENSMOCG00000008715	Rbm38	75	81.461	ENSFALG00000010805	RBM38	92	81.461	Ficedula_albicollis
ENSMOCG00000008715	Rbm38	89	57.940	ENSFHEG00000017748	rbm38	72	64.481	Fundulus_heteroclitus
ENSMOCG00000008715	Rbm38	89	72.685	ENSFHEG00000006160	-	92	71.296	Fundulus_heteroclitus
ENSMOCG00000008715	Rbm38	76	70.166	ENSGMOG00000016655	-	96	74.176	Gadus_morhua
ENSMOCG00000008715	Rbm38	91	77.982	ENSGALG00000026081	RBM38	100	77.523	Gallus_gallus
ENSMOCG00000008715	Rbm38	91	66.368	ENSGACG00000009873	-	100	66.518	Gasterosteus_aculeatus
ENSMOCG00000008715	Rbm38	89	63.679	ENSGACG00000015224	rbm38	98	62.736	Gasterosteus_aculeatus
ENSMOCG00000008715	Rbm38	91	79.817	ENSGAGG00000001187	RBM38	100	79.358	Gopherus_agassizii
ENSMOCG00000008715	Rbm38	100	58.776	ENSHBUG00000012058	rbm38	100	57.551	Haplochromis_burtoni
ENSMOCG00000008715	Rbm38	94	66.957	ENSHBUG00000011778	-	97	68.398	Haplochromis_burtoni
ENSMOCG00000008715	Rbm38	100	90.795	ENSHGLG00000015077	RBM38	100	90.795	Heterocephalus_glaber_female
ENSMOCG00000008715	Rbm38	63	68.212	ENSHCOG00000019040	rbm38	65	68.212	Hippocampus_comes
ENSMOCG00000008715	Rbm38	81	70.051	ENSHCOG00000005622	-	54	71.649	Hippocampus_comes
ENSMOCG00000008715	Rbm38	100	61.111	ENSIPUG00000019349	-	100	60.317	Ictalurus_punctatus
ENSMOCG00000008715	Rbm38	89	53.814	ENSKMAG00000012402	rbm38	79	57.979	Kryptolebias_marmoratus
ENSMOCG00000008715	Rbm38	89	59.227	ENSLBEG00000018878	rbm38	72	66.120	Labrus_bergylta
ENSMOCG00000008715	Rbm38	94	66.522	ENSLBEG00000016163	RBM38	97	64.679	Labrus_bergylta
ENSMOCG00000008715	Rbm38	92	70.796	ENSLOCG00000003456	rbm38	95	70.796	Lepisosteus_oculatus
ENSMOCG00000008715	Rbm38	97	92.241	ENSMFAG00000043808	RBM38	97	92.241	Macaca_fascicularis
ENSMOCG00000008715	Rbm38	100	91.632	ENSMMUG00000031391	RBM38	100	93.388	Macaca_mulatta
ENSMOCG00000008715	Rbm38	100	91.632	ENSMNEG00000034683	RBM38	100	93.388	Macaca_nemestrina
ENSMOCG00000008715	Rbm38	94	60.581	ENSMAMG00000020499	RBM38	97	62.810	Mastacembelus_armatus
ENSMOCG00000008715	Rbm38	89	59.227	ENSMAMG00000024135	rbm38	72	66.120	Mastacembelus_armatus
ENSMOCG00000008715	Rbm38	89	58.798	ENSMZEG00005026036	rbm38	72	65.027	Maylandia_zebra
ENSMOCG00000008715	Rbm38	94	66.957	ENSMZEG00005000849	-	97	68.398	Maylandia_zebra
ENSMOCG00000008715	Rbm38	100	98.312	ENSMAUG00000021211	Rbm38	100	98.312	Mesocricetus_auratus
ENSMOCG00000008715	Rbm38	91	95.370	ENSMICG00000038011	RBM38	100	95.370	Microcebus_murinus
ENSMOCG00000008715	Rbm38	94	66.228	ENSMMOG00000020051	-	96	68.122	Mola_mola
ENSMOCG00000008715	Rbm38	100	75.314	ENSMODG00000016458	RBM38	100	74.895	Monodelphis_domestica
ENSMOCG00000008715	Rbm38	91	57.727	ENSMALG00000022327	rbm38	66	71.895	Monopterus_albus
ENSMOCG00000008715	Rbm38	80	72.165	ENSMALG00000004680	RBM38	72	72.165	Monopterus_albus
ENSMOCG00000008715	Rbm38	100	95.781	MGP_CAROLIEiJ_G0024745	Rbm38	100	95.781	Mus_caroli
ENSMOCG00000008715	Rbm38	100	96.203	ENSMUSG00000027510	Rbm38	100	96.203	Mus_musculus
ENSMOCG00000008715	Rbm38	100	95.359	MGP_PahariEiJ_G0026186	Rbm38	100	95.359	Mus_pahari
ENSMOCG00000008715	Rbm38	100	95.781	MGP_SPRETEiJ_G0025665	Rbm38	100	95.781	Mus_spretus
ENSMOCG00000008715	Rbm38	78	94.595	ENSMPUG00000006518	RBM38	91	94.565	Mustela_putorius_furo
ENSMOCG00000008715	Rbm38	91	89.815	ENSMLUG00000011140	RBM38	100	89.815	Myotis_lucifugus
ENSMOCG00000008715	Rbm38	100	58.537	ENSNBRG00000022685	rbm38	99	56.911	Neolamprologus_brichardi
ENSMOCG00000008715	Rbm38	94	62.963	ENSNBRG00000022545	-	92	65.517	Neolamprologus_brichardi
ENSMOCG00000008715	Rbm38	100	92.050	ENSODEG00000007980	RBM38	100	92.050	Octodon_degus
ENSMOCG00000008715	Rbm38	89	59.052	ENSONIG00000017073	rbm38	73	65.574	Oreochromis_niloticus
ENSMOCG00000008715	Rbm38	93	62.810	ENSONIG00000020324	-	92	65.368	Oreochromis_niloticus
ENSMOCG00000008715	Rbm38	91	78.241	ENSOANG00000009259	RBM38	83	78.241	Ornithorhynchus_anatinus
ENSMOCG00000008715	Rbm38	89	56.838	ENSORLG00000012154	rbm38	72	62.842	Oryzias_latipes
ENSMOCG00000008715	Rbm38	89	62.500	ENSORLG00000027180	-	92	65.665	Oryzias_latipes
ENSMOCG00000008715	Rbm38	89	62.500	ENSORLG00020020751	-	92	65.665	Oryzias_latipes_hni
ENSMOCG00000008715	Rbm38	89	57.692	ENSORLG00020017871	rbm38	72	63.934	Oryzias_latipes_hni
ENSMOCG00000008715	Rbm38	89	61.905	ENSORLG00015017040	-	92	64.655	Oryzias_latipes_hsok
ENSMOCG00000008715	Rbm38	90	58.986	ENSORLG00015012606	rbm38	90	58.986	Oryzias_latipes_hsok
ENSMOCG00000008715	Rbm38	89	61.304	ENSOMEG00000023912	-	92	64.069	Oryzias_melastigma
ENSMOCG00000008715	Rbm38	89	57.265	ENSOMEG00000006805	rbm38	72	63.934	Oryzias_melastigma
ENSMOCG00000008715	Rbm38	100	90.833	ENSOGAG00000029136	RBM38	100	90.833	Otolemur_garnettii
ENSMOCG00000008715	Rbm38	100	90.377	ENSPPRG00000009507	RBM38	100	91.736	Panthera_pardus
ENSMOCG00000008715	Rbm38	54	96.094	ENSPTRG00000045845	-	70	96.094	Pan_troglodytes
ENSMOCG00000008715	Rbm38	88	90.865	ENSPTRG00000013661	RBM38	100	93.388	Pan_troglodytes
ENSMOCG00000008715	Rbm38	100	91.632	ENSPANG00000020919	-	100	93.388	Papio_anubis
ENSMOCG00000008715	Rbm38	99	71.610	ENSPANG00000033127	-	100	71.610	Papio_anubis
ENSMOCG00000008715	Rbm38	95	61.885	ENSPKIG00000025417	rbm38	98	61.885	Paramormyrops_kingsleyae
ENSMOCG00000008715	Rbm38	89	68.182	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSMOCG00000008715	Rbm38	97	76.623	ENSPSIG00000011649	RBM38	97	76.190	Pelodiscus_sinensis
ENSMOCG00000008715	Rbm38	92	59.414	ENSPMGG00000017094	-	94	59.583	Periophthalmus_magnuspinnatus
ENSMOCG00000008715	Rbm38	91	56.303	ENSPMGG00000011343	rbm38	74	64.706	Periophthalmus_magnuspinnatus
ENSMOCG00000008715	Rbm38	100	75.314	ENSPCIG00000013648	RBM38	100	75.314	Phascolarctos_cinereus
ENSMOCG00000008715	Rbm38	89	56.962	ENSPFOG00000011658	rbm38	72	65.217	Poecilia_formosa
ENSMOCG00000008715	Rbm38	89	67.234	ENSPLAG00000002500	-	92	67.234	Poecilia_latipinna
ENSMOCG00000008715	Rbm38	89	55.983	ENSPLAG00000005218	rbm38	72	65.217	Poecilia_latipinna
ENSMOCG00000008715	Rbm38	89	56.838	ENSPMEG00000015770	rbm38	72	65.217	Poecilia_mexicana
ENSMOCG00000008715	Rbm38	89	57.265	ENSPREG00000007398	rbm38	72	65.761	Poecilia_reticulata
ENSMOCG00000008715	Rbm38	100	92.083	ENSPCOG00000026201	RBM38	100	92.623	Propithecus_coquereli
ENSMOCG00000008715	Rbm38	100	62.762	ENSPVAG00000006457	RBM38	100	62.762	Pteropus_vampyrus
ENSMOCG00000008715	Rbm38	89	69.266	ENSPNYG00000019727	-	100	88.034	Pundamilia_nyererei
ENSMOCG00000008715	Rbm38	100	58.197	ENSPNYG00000021373	rbm38	100	58.025	Pundamilia_nyererei
ENSMOCG00000008715	Rbm38	92	66.516	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSMOCG00000008715	Rbm38	85	66.197	ENSPNAG00000010596	rbm38	75	70.879	Pygocentrus_nattereri
ENSMOCG00000008715	Rbm38	100	97.046	ENSRNOG00000006420	Rbm38	100	97.046	Rattus_norvegicus
ENSMOCG00000008715	Rbm38	100	75.314	ENSRROG00000036388	-	100	75.314	Rhinopithecus_roxellana
ENSMOCG00000008715	Rbm38	91	94.444	ENSSBOG00000031053	RBM38	100	97.196	Saimiri_boliviensis_boliviensis
ENSMOCG00000008715	Rbm38	94	66.234	ENSSFOG00015004453	rbm38	92	69.091	Scleropages_formosus
ENSMOCG00000008715	Rbm38	94	63.525	ENSSDUG00000021082	RBM38	92	64.655	Seriola_dumerili
ENSMOCG00000008715	Rbm38	89	60.515	ENSSDUG00000022611	rbm38	72	67.213	Seriola_dumerili
ENSMOCG00000008715	Rbm38	97	61.017	ENSSLDG00000010845	rbm38	97	60.000	Seriola_lalandi_dorsalis
ENSMOCG00000008715	Rbm38	94	63.525	ENSSLDG00000011778	RBM38	92	64.655	Seriola_lalandi_dorsalis
ENSMOCG00000008715	Rbm38	89	59.227	ENSSPAG00000011113	rbm38	72	66.120	Stegastes_partitus
ENSMOCG00000008715	Rbm38	94	64.444	ENSSPAG00000020989	RBM38	91	67.907	Stegastes_partitus
ENSMOCG00000008715	Rbm38	100	90.795	ENSSSCG00000007504	RBM38	100	90.795	Sus_scrofa
ENSMOCG00000008715	Rbm38	89	56.332	ENSTRUG00000024954	rbm38	73	63.934	Takifugu_rubripes
ENSMOCG00000008715	Rbm38	94	63.934	ENSTRUG00000019869	-	92	67.382	Takifugu_rubripes
ENSMOCG00000008715	Rbm38	89	69.231	ENSTNIG00000007093	-	97	68.468	Tetraodon_nigroviridis
ENSMOCG00000008715	Rbm38	50	83.051	ENSTBEG00000001689	-	50	83.051	Tupaia_belangeri
ENSMOCG00000008715	Rbm38	100	90.795	ENSUAMG00000019780	RBM38	100	90.795	Ursus_americanus
ENSMOCG00000008715	Rbm38	100	90.795	ENSVVUG00000017246	RBM38	100	90.795	Vulpes_vulpes
ENSMOCG00000008715	Rbm38	92	72.444	ENSXETG00000011268	rbm38	100	73.333	Xenopus_tropicalis
ENSMOCG00000008715	Rbm38	54	77.444	ENSXCOG00000017324	-	60	77.444	Xiphophorus_couchianus
ENSMOCG00000008715	Rbm38	89	57.940	ENSXMAG00000023662	rbm38	72	66.120	Xiphophorus_maculatus