EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000009381 (Gene tree)
Gene ID: 101993771
Gene Symbol: Rif1
Alias: 5730435J01Rik|6530403D07Rik|D2Ertd145e
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 49359 bases
Position: chr4:65176111-65225469
Accession: 101993771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000009285	Rif1_N	PF12231.8	2.1e-65	1	1
ENSMOCP00000009282	Rif1_N	PF12231.8	1.4e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000012098	-	7248	-	ENSMOCP00000009282	2415 (aa)	-	-
ENSMOCT00000012102	-	7218	XM_013345981	ENSMOCP00000009285	2405 (aa)	XP_013201435	-

Gene Model

Click here to download ENSMOCG00000009381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000009381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000009381	Rif1	100	69.698	ENSG00000080345	RIF1	99	80.048	Homo_sapiens
ENSMOCG00000009381	Rif1	100	69.886	ENSAMEG00000008461	RIF1	100	69.886	Ailuropoda_melanoleuca
ENSMOCG00000009381	Rif1	67	47.900	ENSACIG00000017765	rif1	72	48.111	Amphilophus_citrinellus
ENSMOCG00000009381	Rif1	66	47.671	ENSAOCG00000017231	rif1	66	47.671	Amphiprion_ocellaris
ENSMOCG00000009381	Rif1	72	51.707	ENSAPEG00000013228	rif1	64	51.707	Amphiprion_percula
ENSMOCG00000009381	Rif1	79	41.456	ENSATEG00000022887	rif1	68	45.283	Anabas_testudineus
ENSMOCG00000009381	Rif1	86	58.481	ENSAPLG00000007092	RIF1	94	58.481	Anas_platyrhynchos
ENSMOCG00000009381	Rif1	84	58.112	ENSACAG00000003714	RIF1	92	51.351	Anolis_carolinensis
ENSMOCG00000009381	Rif1	100	69.535	ENSANAG00000024840	RIF1	99	69.535	Aotus_nancymaae
ENSMOCG00000009381	Rif1	65	50.119	ENSAMXG00000010910	rif1	65	50.195	Astyanax_mexicanus
ENSMOCG00000009381	Rif1	94	68.491	ENSBTAG00000021020	RIF1	99	68.491	Bos_taurus
ENSMOCG00000009381	Rif1	100	69.184	ENSCJAG00000003138	RIF1	99	69.184	Callithrix_jacchus
ENSMOCG00000009381	Rif1	100	68.090	ENSCAFG00000005670	RIF1	97	68.048	Canis_familiaris
ENSMOCG00000009381	Rif1	100	68.278	ENSCAFG00020016401	RIF1	99	68.180	Canis_lupus_dingo
ENSMOCG00000009381	Rif1	100	68.715	ENSCHIG00000020327	RIF1	99	68.836	Capra_hircus
ENSMOCG00000009381	Rif1	99	67.418	ENSTSYG00000008861	RIF1	100	67.418	Carlito_syrichta
ENSMOCG00000009381	Rif1	82	81.395	ENSCAPG00000008957	RIF1	97	81.395	Cavia_aperea
ENSMOCG00000009381	Rif1	100	66.735	ENSCPOG00000037898	RIF1	99	66.762	Cavia_porcellus
ENSMOCG00000009381	Rif1	100	69.592	ENSCCAG00000024760	RIF1	99	69.592	Cebus_capucinus
ENSMOCG00000009381	Rif1	100	70.097	ENSCATG00000033353	RIF1	99	70.097	Cercocebus_atys
ENSMOCG00000009381	Rif1	96	67.492	ENSCLAG00000001517	RIF1	99	67.436	Chinchilla_lanigera
ENSMOCG00000009381	Rif1	100	70.218	ENSCSAG00000016089	RIF1	99	70.218	Chlorocebus_sabaeus
ENSMOCG00000009381	Rif1	97	72.609	ENSCHOG00000007187	RIF1	97	72.609	Choloepus_hoffmanni
ENSMOCG00000009381	Rif1	88	67.257	ENSCPBG00000025885	RIF1	94	68.437	Chrysemys_picta_bellii
ENSMOCG00000009381	Rif1	100	68.790	ENSCANG00000028962	RIF1	100	69.688	Colobus_angolensis_palliatus
ENSMOCG00000009381	Rif1	100	81.148	ENSCGRG00001024589	Rif1	100	81.189	Cricetulus_griseus_chok1gshd
ENSMOCG00000009381	Rif1	99	81.664	ENSCGRG00000010713	Rif1	100	81.705	Cricetulus_griseus_crigri
ENSMOCG00000009381	Rif1	51	47.096	ENSCSEG00000003945	rif1	54	46.873	Cynoglossus_semilaevis
ENSMOCG00000009381	Rif1	53	45.843	ENSCVAG00000022479	rif1	54	45.633	Cyprinodon_variegatus
ENSMOCG00000009381	Rif1	99	66.815	ENSDNOG00000011194	RIF1	97	66.775	Dasypus_novemcinctus
ENSMOCG00000009381	Rif1	91	66.591	ENSETEG00000012421	RIF1	91	66.591	Echinops_telfairi
ENSMOCG00000009381	Rif1	96	81.333	ENSEASG00005023434	RIF1	99	81.333	Equus_asinus_asinus
ENSMOCG00000009381	Rif1	96	82.326	ENSECAG00000012679	RIF1	99	82.326	Equus_caballus
ENSMOCG00000009381	Rif1	64	49.162	ENSELUG00000006826	rif1	56	48.702	Esox_lucius
ENSMOCG00000009381	Rif1	100	68.785	ENSFCAG00000029742	RIF1	99	68.838	Felis_catus
ENSMOCG00000009381	Rif1	78	64.062	ENSFALG00000013874	RIF1	81	64.375	Ficedula_albicollis
ENSMOCG00000009381	Rif1	100	68.427	ENSFDAG00000006538	RIF1	99	68.427	Fukomys_damarensis
ENSMOCG00000009381	Rif1	61	47.222	ENSGMOG00000003517	rif1	90	47.222	Gadus_morhua
ENSMOCG00000009381	Rif1	83	57.750	ENSGALG00000012484	RIF1	92	57.750	Gallus_gallus
ENSMOCG00000009381	Rif1	70	47.910	ENSGAFG00000017196	rif1	76	47.795	Gambusia_affinis
ENSMOCG00000009381	Rif1	60	54.825	ENSGACG00000008579	rif1	65	54.825	Gasterosteus_aculeatus
ENSMOCG00000009381	Rif1	88	67.169	ENSGAGG00000012595	RIF1	95	68.373	Gopherus_agassizii
ENSMOCG00000009381	Rif1	89	82.429	ENSGGOG00000040178	RIF1	96	82.429	Gorilla_gorilla
ENSMOCG00000009381	Rif1	64	51.923	ENSHBUG00000007125	rif1	68	51.923	Haplochromis_burtoni
ENSMOCG00000009381	Rif1	94	67.966	ENSHGLG00100009807	RIF1	99	68.094	Heterocephalus_glaber_male
ENSMOCG00000009381	Rif1	65	46.363	ENSHCOG00000015943	rif1	60	46.915	Hippocampus_comes
ENSMOCG00000009381	Rif1	100	70.986	ENSSTOG00000020712	RIF1	99	70.986	Ictidomys_tridecemlineatus
ENSMOCG00000009381	Rif1	99	68.531	ENSJJAG00000023000	Rif1	100	68.829	Jaculus_jaculus
ENSMOCG00000009381	Rif1	52	47.504	ENSKMAG00000002852	rif1	67	47.604	Kryptolebias_marmoratus
ENSMOCG00000009381	Rif1	63	51.361	ENSLBEG00000023196	rif1	57	51.361	Labrus_bergylta
ENSMOCG00000009381	Rif1	85	62.391	ENSLACG00000005425	RIF1	89	62.391	Latimeria_chalumnae
ENSMOCG00000009381	Rif1	64	51.770	ENSLOCG00000002657	rif1	83	50.962	Lepisosteus_oculatus
ENSMOCG00000009381	Rif1	100	68.877	ENSLAFG00000009796	RIF1	100	68.742	Loxodonta_africana
ENSMOCG00000009381	Rif1	100	70.137	ENSMFAG00000032233	RIF1	99	70.137	Macaca_fascicularis
ENSMOCG00000009381	Rif1	100	70.137	ENSMMUG00000008611	RIF1	99	70.137	Macaca_mulatta
ENSMOCG00000009381	Rif1	100	70.137	ENSMNEG00000031616	RIF1	99	70.137	Macaca_nemestrina
ENSMOCG00000009381	Rif1	100	70.218	ENSMLEG00000042945	RIF1	99	70.218	Mandrillus_leucophaeus
ENSMOCG00000009381	Rif1	65	47.720	ENSMAMG00000001745	rif1	65	47.720	Mastacembelus_armatus
ENSMOCG00000009381	Rif1	68	47.623	ENSMZEG00005020920	rif1	73	47.336	Maylandia_zebra
ENSMOCG00000009381	Rif1	95	54.374	ENSMGAG00000012732	RIF1	99	54.762	Meleagris_gallopavo
ENSMOCG00000009381	Rif1	95	88.022	ENSMAUG00000013158	Rif1	99	88.022	Mesocricetus_auratus
ENSMOCG00000009381	Rif1	100	71.135	ENSMICG00000046127	RIF1	99	71.055	Microcebus_murinus
ENSMOCG00000009381	Rif1	52	46.714	ENSMMOG00000006519	rif1	52	46.714	Mola_mola
ENSMOCG00000009381	Rif1	100	56.187	ENSMODG00000003703	RIF1	99	56.187	Monodelphis_domestica
ENSMOCG00000009381	Rif1	64	47.143	ENSMALG00000016759	rif1	65	50.270	Monopterus_albus
ENSMOCG00000009381	Rif1	100	78.143	MGP_CAROLIEiJ_G0023555	Rif1	100	78.143	Mus_caroli
ENSMOCG00000009381	Rif1	100	78.642	ENSMUSG00000036202	Rif1	100	78.642	Mus_musculus
ENSMOCG00000009381	Rif1	100	77.499	MGP_PahariEiJ_G0025006	Rif1	100	77.499	Mus_pahari
ENSMOCG00000009381	Rif1	100	78.654	MGP_SPRETEiJ_G0024476	Rif1	100	78.695	Mus_spretus
ENSMOCG00000009381	Rif1	100	68.665	ENSMPUG00000000371	RIF1	99	68.665	Mustela_putorius_furo
ENSMOCG00000009381	Rif1	89	68.037	ENSMLUG00000003376	RIF1	99	68.037	Myotis_lucifugus
ENSMOCG00000009381	Rif1	100	72.798	ENSNGAG00000009268	Rif1	99	73.423	Nannospalax_galili
ENSMOCG00000009381	Rif1	66	48.578	ENSNBRG00000014257	rif1	72	46.863	Neolamprologus_brichardi
ENSMOCG00000009381	Rif1	100	68.257	ENSNLEG00000010955	RIF1	99	68.474	Nomascus_leucogenys
ENSMOCG00000009381	Rif1	79	70.492	ENSMEUG00000007601	-	85	70.492	Notamacropus_eugenii
ENSMOCG00000009381	Rif1	100	67.103	ENSODEG00000003950	RIF1	99	67.838	Octodon_degus
ENSMOCG00000009381	Rif1	73	69.671	ENSOANG00000006078	-	76	69.671	Ornithorhynchus_anatinus
ENSMOCG00000009381	Rif1	100	68.917	ENSOCUG00000017435	RIF1	99	68.917	Oryctolagus_cuniculus
ENSMOCG00000009381	Rif1	64	46.148	ENSORLG00020001302	rif1	68	46.148	Oryzias_latipes_hni
ENSMOCG00000009381	Rif1	64	46.142	ENSORLG00015000009	rif1	67	45.433	Oryzias_latipes_hsok
ENSMOCG00000009381	Rif1	63	46.737	ENSOMEG00000021513	rif1	67	46.417	Oryzias_melastigma
ENSMOCG00000009381	Rif1	100	69.017	ENSOGAG00000006141	RIF1	99	68.884	Otolemur_garnettii
ENSMOCG00000009381	Rif1	100	69.063	ENSOARG00000008930	RIF1	99	69.184	Ovis_aries
ENSMOCG00000009381	Rif1	100	69.891	ENSPPAG00000023754	RIF1	99	69.891	Pan_paniscus
ENSMOCG00000009381	Rif1	100	68.347	ENSPPRG00000003618	RIF1	99	68.770	Panthera_pardus
ENSMOCG00000009381	Rif1	100	68.387	ENSPTIG00000020652	RIF1	99	68.810	Panthera_tigris_altaica
ENSMOCG00000009381	Rif1	100	70.012	ENSPTRG00000012534	RIF1	99	70.012	Pan_troglodytes
ENSMOCG00000009381	Rif1	100	70.016	ENSPANG00000008525	RIF1	99	70.016	Papio_anubis
ENSMOCG00000009381	Rif1	64	50.364	ENSPKIG00000004267	rif1	68	50.481	Paramormyrops_kingsleyae
ENSMOCG00000009381	Rif1	66	43.644	ENSPMGG00000016141	rif1	75	45.192	Periophthalmus_magnuspinnatus
ENSMOCG00000009381	Rif1	99	83.823	ENSPEMG00000000446	Rif1	99	83.823	Peromyscus_maniculatus_bairdii
ENSMOCG00000009381	Rif1	72	59.149	ENSPCIG00000009185	RIF1	75	59.373	Phascolarctos_cinereus
ENSMOCG00000009381	Rif1	64	49.393	ENSPFOG00000017804	rif1	66	49.393	Poecilia_formosa
ENSMOCG00000009381	Rif1	64	49.072	ENSPLAG00000017945	rif1	68	48.796	Poecilia_latipinna
ENSMOCG00000009381	Rif1	65	48.312	ENSPREG00000018052	rif1	69	48.201	Poecilia_reticulata
ENSMOCG00000009381	Rif1	100	69.695	ENSPPYG00000012846	RIF1	99	69.915	Pongo_abelii
ENSMOCG00000009381	Rif1	82	77.670	ENSPCAG00000009032	RIF1	83	77.670	Procavia_capensis
ENSMOCG00000009381	Rif1	100	71.164	ENSPCOG00000027888	RIF1	99	71.164	Propithecus_coquereli
ENSMOCG00000009381	Rif1	93	77.485	ENSPVAG00000014276	RIF1	95	77.485	Pteropus_vampyrus
ENSMOCG00000009381	Rif1	68	46.142	ENSPNYG00000012940	rif1	72	46.295	Pundamilia_nyererei
ENSMOCG00000009381	Rif1	100	78.434	ENSRNOG00000054901	Rif1	100	78.434	Rattus_norvegicus
ENSMOCG00000009381	Rif1	100	69.383	ENSRBIG00000003704	RIF1	99	69.572	Rhinopithecus_bieti
ENSMOCG00000009381	Rif1	100	70.121	ENSRROG00000028206	RIF1	99	70.311	Rhinopithecus_roxellana
ENSMOCG00000009381	Rif1	98	87.097	ENSSBOG00000029530	RIF1	99	87.097	Saimiri_boliviensis_boliviensis
ENSMOCG00000009381	Rif1	100	56.024	ENSSHAG00000018552	RIF1	100	54.929	Sarcophilus_harrisii
ENSMOCG00000009381	Rif1	66	50.312	ENSSFOG00015021539	rif1	85	49.051	Scleropages_formosus
ENSMOCG00000009381	Rif1	65	47.504	ENSSMAG00000011704	rif1	61	47.194	Scophthalmus_maximus
ENSMOCG00000009381	Rif1	74	46.006	ENSSDUG00000015632	rif1	73	46.199	Seriola_dumerili
ENSMOCG00000009381	Rif1	65	42.645	ENSSLDG00000019531	rif1	55	45.527	Seriola_lalandi_dorsalis
ENSMOCG00000009381	Rif1	60	80.000	ENSSARG00000007161	-	62	80.000	Sorex_araneus
ENSMOCG00000009381	Rif1	88	66.856	ENSSPUG00000003062	RIF1	95	66.856	Sphenodon_punctatus
ENSMOCG00000009381	Rif1	50	52.535	ENSSPAG00000018359	rif1	75	52.535	Stegastes_partitus
ENSMOCG00000009381	Rif1	100	69.653	ENSSSCG00000016395	RIF1	99	69.653	Sus_scrofa
ENSMOCG00000009381	Rif1	67	48.370	ENSTRUG00000015808	rif1	71	47.437	Takifugu_rubripes
ENSMOCG00000009381	Rif1	53	46.366	ENSTNIG00000011538	rif1	55	46.325	Tetraodon_nigroviridis
ENSMOCG00000009381	Rif1	83	85.350	ENSTBEG00000016082	RIF1	82	85.350	Tupaia_belangeri
ENSMOCG00000009381	Rif1	100	69.911	ENSTTRG00000011190	RIF1	99	69.911	Tursiops_truncatus
ENSMOCG00000009381	Rif1	91	67.848	ENSUAMG00000026385	RIF1	99	68.843	Ursus_americanus
ENSMOCG00000009381	Rif1	100	69.243	ENSUMAG00000000337	RIF1	99	69.243	Ursus_maritimus
ENSMOCG00000009381	Rif1	100	67.474	ENSVPAG00000002162	RIF1	99	67.621	Vicugna_pacos
ENSMOCG00000009381	Rif1	100	68.327	ENSVVUG00000011293	RIF1	99	68.327	Vulpes_vulpes
ENSMOCG00000009381	Rif1	64	47.343	ENSXMAG00000000506	rif1	64	46.499	Xiphophorus_maculatus