EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000009390 (Gene tree)
Gene ID: 101981413
Gene Symbol: Sbno1
Alias: 9330180L10Rik|sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 41452 bases
Position: chr2:13143459-13184910
Accession: 101981413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000009299	ResIII	PF04851.15	7.3e-08	1	1
ENSMOCP00000009293	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000012118	-	4104	XM_013349618	ENSMOCP00000009293	1367 (aa)	XP_013205072	-
ENSMOCT00000012126	-	3810	-	ENSMOCP00000009299	1269 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000009390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000009390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000009390	Sbno1	82	56.859	ENSMOCG00000010504	Sbno2	76	56.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000009390	Sbno1	99	98.734	ENSG00000139697	SBNO1	97	97.865	Homo_sapiens
ENSMOCG00000009390	Sbno1	84	82.709	ENSAPOG00000003196	sbno1	98	78.430	Acanthochromis_polyacanthus
ENSMOCG00000009390	Sbno1	100	97.331	ENSAMEG00000015151	SBNO1	100	93.777	Ailuropoda_melanoleuca
ENSMOCG00000009390	Sbno1	99	81.436	ENSACIG00000008088	sbno1	95	81.436	Amphilophus_citrinellus
ENSMOCG00000009390	Sbno1	99	81.996	ENSAOCG00000014859	sbno1	99	72.939	Amphiprion_ocellaris
ENSMOCG00000009390	Sbno1	99	81.996	ENSAPEG00000006069	sbno1	99	72.939	Amphiprion_percula
ENSMOCG00000009390	Sbno1	99	83.935	ENSATEG00000006667	sbno1	95	83.935	Anabas_testudineus
ENSMOCG00000009390	Sbno1	99	94.575	ENSAPLG00000015674	SBNO1	95	94.604	Anas_platyrhynchos
ENSMOCG00000009390	Sbno1	100	92.832	ENSACAG00000015441	SBNO1	84	93.165	Anolis_carolinensis
ENSMOCG00000009390	Sbno1	99	98.192	ENSANAG00000029958	-	100	96.792	Aotus_nancymaae
ENSMOCG00000009390	Sbno1	99	73.626	ENSACLG00000024913	sbno1	100	73.299	Astatotilapia_calliptera
ENSMOCG00000009390	Sbno1	99	86.151	ENSAMXG00000019473	sbno1	95	86.151	Astyanax_mexicanus
ENSMOCG00000009390	Sbno1	100	96.975	ENSBTAG00000020505	SBNO1	100	93.692	Bos_taurus
ENSMOCG00000009390	Sbno1	99	98.553	ENSCJAG00000016599	SBNO1	100	93.687	Callithrix_jacchus
ENSMOCG00000009390	Sbno1	99	98.018	ENSCAFG00000007503	SBNO1	100	95.270	Canis_familiaris
ENSMOCG00000009390	Sbno1	100	96.929	ENSCAFG00020015363	SBNO1	100	96.929	Canis_lupus_dingo
ENSMOCG00000009390	Sbno1	100	97.717	ENSCHIG00000008382	SBNO1	100	97.717	Capra_hircus
ENSMOCG00000009390	Sbno1	99	98.915	ENSTSYG00000012749	SBNO1	100	94.724	Carlito_syrichta
ENSMOCG00000009390	Sbno1	97	98.381	ENSCAPG00000000384	SBNO1	99	98.042	Cavia_aperea
ENSMOCG00000009390	Sbno1	100	97.480	ENSCPOG00000008109	SBNO1	100	97.480	Cavia_porcellus
ENSMOCG00000009390	Sbno1	99	93.861	ENSCCAG00000035316	SBNO1	100	92.368	Cebus_capucinus
ENSMOCG00000009390	Sbno1	98	98.734	ENSCATG00000008239	SBNO1	99	96.486	Cercocebus_atys
ENSMOCG00000009390	Sbno1	100	97.480	ENSCLAG00000008995	SBNO1	100	97.480	Chinchilla_lanigera
ENSMOCG00000009390	Sbno1	84	97.509	ENSCSAG00000002064	SBNO1	100	94.219	Chlorocebus_sabaeus
ENSMOCG00000009390	Sbno1	95	97.073	ENSCHOG00000008814	SBNO1	91	97.073	Choloepus_hoffmanni
ENSMOCG00000009390	Sbno1	100	94.265	ENSCPBG00000025968	SBNO1	94	94.604	Chrysemys_picta_bellii
ENSMOCG00000009390	Sbno1	99	90.597	ENSCANG00000042688	-	100	88.691	Colobus_angolensis_palliatus
ENSMOCG00000009390	Sbno1	100	99.212	ENSCGRG00001017470	Sbno1	100	99.212	Cricetulus_griseus_chok1gshd
ENSMOCG00000009390	Sbno1	100	99.212	ENSCGRG00000004756	Sbno1	100	99.212	Cricetulus_griseus_crigri
ENSMOCG00000009390	Sbno1	99	82.671	ENSCSEG00000011919	sbno1	96	81.818	Cynoglossus_semilaevis
ENSMOCG00000009390	Sbno1	99	82.796	ENSCVAG00000007038	sbno1	95	82.796	Cyprinodon_variegatus
ENSMOCG00000009390	Sbno1	99	85.714	ENSDARG00000099080	sbno1	95	85.714	Danio_rerio
ENSMOCG00000009390	Sbno1	100	91.031	ENSDNOG00000017147	SBNO1	98	91.897	Dasypus_novemcinctus
ENSMOCG00000009390	Sbno1	100	80.444	ENSDORG00000015261	Sbno1	99	91.906	Dipodomys_ordii
ENSMOCG00000009390	Sbno1	92	97.826	ENSETEG00000005620	SBNO1	88	97.163	Echinops_telfairi
ENSMOCG00000009390	Sbno1	72	83.744	ENSEBUG00000013823	sbno1	85	83.744	Eptatretus_burgeri
ENSMOCG00000009390	Sbno1	54	94.469	ENSEASG00005012595	-	91	96.861	Equus_asinus_asinus
ENSMOCG00000009390	Sbno1	100	97.153	ENSECAG00000006127	SBNO1	100	94.122	Equus_caballus
ENSMOCG00000009390	Sbno1	82	97.268	ENSEEUG00000003793	SBNO1	83	97.268	Erinaceus_europaeus
ENSMOCG00000009390	Sbno1	99	85.971	ENSELUG00000002886	sbno1	95	85.971	Esox_lucius
ENSMOCG00000009390	Sbno1	99	97.683	ENSFCAG00000015331	SBNO1	99	94.046	Felis_catus
ENSMOCG00000009390	Sbno1	99	95.118	ENSFALG00000009273	SBNO1	95	95.144	Ficedula_albicollis
ENSMOCG00000009390	Sbno1	100	94.836	ENSFDAG00000014232	SBNO1	100	94.601	Fukomys_damarensis
ENSMOCG00000009390	Sbno1	99	83.154	ENSFHEG00000007360	sbno1	95	83.154	Fundulus_heteroclitus
ENSMOCG00000009390	Sbno1	96	84.220	ENSGMOG00000018229	sbno1	94	84.220	Gadus_morhua
ENSMOCG00000009390	Sbno1	87	96.193	ENSGALG00000003392	SBNO1	94	96.193	Gallus_gallus
ENSMOCG00000009390	Sbno1	99	83.154	ENSGAFG00000003960	sbno1	95	83.154	Gambusia_affinis
ENSMOCG00000009390	Sbno1	96	83.759	ENSGACG00000015633	sbno1	94	83.759	Gasterosteus_aculeatus
ENSMOCG00000009390	Sbno1	100	94.444	ENSGAGG00000001065	SBNO1	100	90.980	Gopherus_agassizii
ENSMOCG00000009390	Sbno1	99	98.734	ENSGGOG00000015000	SBNO1	100	97.478	Gorilla_gorilla
ENSMOCG00000009390	Sbno1	99	67.751	ENSHBUG00000011910	sbno1	100	67.452	Haplochromis_burtoni
ENSMOCG00000009390	Sbno1	99	98.373	ENSHGLG00000014165	-	100	94.523	Heterocephalus_glaber_female
ENSMOCG00000009390	Sbno1	96	76.656	ENSHCOG00000003246	sbno1	95	77.170	Hippocampus_comes
ENSMOCG00000009390	Sbno1	99	85.099	ENSIPUG00000015830	Sbno1	93	88.710	Ictalurus_punctatus
ENSMOCG00000009390	Sbno1	100	97.951	ENSSTOG00000023221	SBNO1	100	97.951	Ictidomys_tridecemlineatus
ENSMOCG00000009390	Sbno1	100	97.331	ENSJJAG00000001741	Sbno1	100	95.830	Jaculus_jaculus
ENSMOCG00000009390	Sbno1	99	84.182	ENSKMAG00000009696	sbno1	95	84.182	Kryptolebias_marmoratus
ENSMOCG00000009390	Sbno1	99	85.199	ENSLBEG00000007623	sbno1	95	85.199	Labrus_bergylta
ENSMOCG00000009390	Sbno1	96	82.286	ENSLACG00000017227	SBNO1	99	90.365	Latimeria_chalumnae
ENSMOCG00000009390	Sbno1	99	87.792	ENSLOCG00000005725	sbno1	95	87.792	Lepisosteus_oculatus
ENSMOCG00000009390	Sbno1	100	92.545	ENSLAFG00000002135	SBNO1	96	96.803	Loxodonta_africana
ENSMOCG00000009390	Sbno1	100	97.687	ENSMFAG00000031429	SBNO1	100	95.455	Macaca_fascicularis
ENSMOCG00000009390	Sbno1	100	97.687	ENSMMUG00000011496	SBNO1	100	95.455	Macaca_mulatta
ENSMOCG00000009390	Sbno1	99	98.734	ENSMLEG00000033260	SBNO1	100	95.827	Mandrillus_leucophaeus
ENSMOCG00000009390	Sbno1	99	84.477	ENSMAMG00000005473	sbno1	95	84.477	Mastacembelus_armatus
ENSMOCG00000009390	Sbno1	99	94.937	ENSMGAG00000003274	SBNO1	94	96.193	Meleagris_gallopavo
ENSMOCG00000009390	Sbno1	52	99.545	ENSMAUG00000004834	-	99	99.545	Mesocricetus_auratus
ENSMOCG00000009390	Sbno1	100	96.088	ENSMICG00000006573	-	100	96.088	Microcebus_murinus
ENSMOCG00000009390	Sbno1	99	83.422	ENSMMOG00000008691	sbno1	94	83.422	Mola_mola
ENSMOCG00000009390	Sbno1	99	96.920	ENSMODG00000012470	SBNO1	94	96.403	Monodelphis_domestica
ENSMOCG00000009390	Sbno1	99	82.790	ENSMALG00000001056	sbno1	100	72.912	Monopterus_albus
ENSMOCG00000009390	Sbno1	99	94.756	MGP_CAROLIEiJ_G0027749	Sbno1	99	99.242	Mus_caroli
ENSMOCG00000009390	Sbno1	99	95.259	ENSMUSG00000038095	Sbno1	99	99.394	Mus_musculus
ENSMOCG00000009390	Sbno1	99	94.820	MGP_PahariEiJ_G0024329	Sbno1	99	99.242	Mus_pahari
ENSMOCG00000009390	Sbno1	99	94.253	MGP_SPRETEiJ_G0028747	Sbno1	99	99.394	Mus_spretus
ENSMOCG00000009390	Sbno1	100	97.509	ENSMPUG00000001658	SBNO1	100	94.050	Mustela_putorius_furo
ENSMOCG00000009390	Sbno1	100	96.797	ENSMLUG00000017159	SBNO1	100	93.405	Myotis_lucifugus
ENSMOCG00000009390	Sbno1	100	97.509	ENSNGAG00000012620	Sbno1	98	98.529	Nannospalax_galili
ENSMOCG00000009390	Sbno1	99	72.506	ENSNBRG00000019189	sbno1	100	72.350	Neolamprologus_brichardi
ENSMOCG00000009390	Sbno1	100	93.386	ENSNLEG00000001502	SBNO1	100	93.386	Nomascus_leucogenys
ENSMOCG00000009390	Sbno1	60	96.774	ENSMEUG00000008768	-	86	96.774	Notamacropus_eugenii
ENSMOCG00000009390	Sbno1	99	96.570	ENSOPRG00000011054	SBNO1	96	95.382	Ochotona_princeps
ENSMOCG00000009390	Sbno1	99	98.373	ENSODEG00000009997	SBNO1	100	97.323	Octodon_degus
ENSMOCG00000009390	Sbno1	99	82.437	ENSONIG00000015348	sbno1	95	82.437	Oreochromis_niloticus
ENSMOCG00000009390	Sbno1	98	95.480	ENSOCUG00000002441	SBNO1	95	92.055	Oryctolagus_cuniculus
ENSMOCG00000009390	Sbno1	99	82.310	ENSORLG00000001593	sbno1	95	82.310	Oryzias_latipes
ENSMOCG00000009390	Sbno1	99	82.310	ENSORLG00020015216	sbno1	95	82.310	Oryzias_latipes_hni
ENSMOCG00000009390	Sbno1	99	82.491	ENSORLG00015002726	sbno1	95	82.491	Oryzias_latipes_hsok
ENSMOCG00000009390	Sbno1	99	82.759	ENSOMEG00000019313	sbno1	99	72.663	Oryzias_melastigma
ENSMOCG00000009390	Sbno1	52	93.343	ENSOGAG00000010781	-	99	93.646	Otolemur_garnettii
ENSMOCG00000009390	Sbno1	100	96.975	ENSOARG00000004404	SBNO1	100	93.481	Ovis_aries
ENSMOCG00000009390	Sbno1	100	97.717	ENSPPAG00000024635	SBNO1	100	97.717	Pan_paniscus
ENSMOCG00000009390	Sbno1	99	97.683	ENSPPRG00000022092	SBNO1	99	94.046	Panthera_pardus
ENSMOCG00000009390	Sbno1	100	97.509	ENSPTIG00000017803	SBNO1	100	93.759	Panthera_tigris_altaica
ENSMOCG00000009390	Sbno1	100	97.795	ENSPTRG00000005597	SBNO1	100	97.795	Pan_troglodytes
ENSMOCG00000009390	Sbno1	99	98.734	ENSPANG00000011640	SBNO1	100	97.638	Papio_anubis
ENSMOCG00000009390	Sbno1	99	85.817	ENSPKIG00000001441	sbno1	95	85.817	Paramormyrops_kingsleyae
ENSMOCG00000009390	Sbno1	91	90.541	ENSPSIG00000009256	-	100	84.615	Pelodiscus_sinensis
ENSMOCG00000009390	Sbno1	99	94.065	ENSPSIG00000009572	-	95	94.065	Pelodiscus_sinensis
ENSMOCG00000009390	Sbno1	100	99.133	ENSPEMG00000016087	Sbno1	100	99.133	Peromyscus_maniculatus_bairdii
ENSMOCG00000009390	Sbno1	99	96.558	ENSPCIG00000010985	SBNO1	95	96.043	Phascolarctos_cinereus
ENSMOCG00000009390	Sbno1	99	83.154	ENSPFOG00000005069	sbno1	95	83.154	Poecilia_formosa
ENSMOCG00000009390	Sbno1	99	83.154	ENSPLAG00000015015	sbno1	95	83.154	Poecilia_latipinna
ENSMOCG00000009390	Sbno1	99	83.154	ENSPMEG00000021212	sbno1	95	83.154	Poecilia_mexicana
ENSMOCG00000009390	Sbno1	99	82.796	ENSPREG00000017746	sbno1	95	82.796	Poecilia_reticulata
ENSMOCG00000009390	Sbno1	99	98.734	ENSPPYG00000005084	SBNO1	96	97.865	Pongo_abelii
ENSMOCG00000009390	Sbno1	90	91.770	ENSPCAG00000008634	SBNO1	88	91.736	Procavia_capensis
ENSMOCG00000009390	Sbno1	100	97.509	ENSPCOG00000024277	SBNO1	100	97.327	Propithecus_coquereli
ENSMOCG00000009390	Sbno1	92	98.016	ENSPVAG00000015304	SBNO1	87	98.016	Pteropus_vampyrus
ENSMOCG00000009390	Sbno1	99	82.437	ENSPNYG00000004291	sbno1	95	82.437	Pundamilia_nyererei
ENSMOCG00000009390	Sbno1	99	86.715	ENSPNAG00000015622	sbno1	95	86.715	Pygocentrus_nattereri
ENSMOCG00000009390	Sbno1	99	98.975	ENSRNOG00000001064	Sbno1	99	98.975	Rattus_norvegicus
ENSMOCG00000009390	Sbno1	100	97.795	ENSRROG00000034230	SBNO1	100	97.795	Rhinopithecus_roxellana
ENSMOCG00000009390	Sbno1	97	91.320	ENSSBOG00000015422	SBNO1	100	88.633	Saimiri_boliviensis_boliviensis
ENSMOCG00000009390	Sbno1	99	85.637	ENSSFOG00015019025	sbno1	95	85.637	Scleropages_formosus
ENSMOCG00000009390	Sbno1	99	83.032	ENSSMAG00000013640	sbno1	95	83.032	Scophthalmus_maximus
ENSMOCG00000009390	Sbno1	99	84.116	ENSSDUG00000023480	sbno1	95	84.116	Seriola_dumerili
ENSMOCG00000009390	Sbno1	99	84.116	ENSSLDG00000007928	sbno1	95	84.116	Seriola_lalandi_dorsalis
ENSMOCG00000009390	Sbno1	91	97.331	ENSSARG00000002594	SBNO1	85	98.192	Sorex_araneus
ENSMOCG00000009390	Sbno1	99	93.502	ENSSPUG00000012640	SBNO1	100	86.351	Sphenodon_punctatus
ENSMOCG00000009390	Sbno1	99	82.437	ENSSPAG00000016244	sbno1	95	82.437	Stegastes_partitus
ENSMOCG00000009390	Sbno1	100	98.208	ENSSSCG00000009776	SBNO1	100	94.189	Sus_scrofa
ENSMOCG00000009390	Sbno1	99	95.298	ENSTGUG00000005380	SBNO1	95	95.324	Taeniopygia_guttata
ENSMOCG00000009390	Sbno1	99	84.087	ENSTRUG00000018490	sbno1	95	84.087	Takifugu_rubripes
ENSMOCG00000009390	Sbno1	56	70.775	ENSTNIG00000013506	sbno1	98	70.603	Tetraodon_nigroviridis
ENSMOCG00000009390	Sbno1	100	97.331	ENSUAMG00000019671	SBNO1	100	93.907	Ursus_americanus
ENSMOCG00000009390	Sbno1	100	97.331	ENSUMAG00000004002	SBNO1	100	93.907	Ursus_maritimus
ENSMOCG00000009390	Sbno1	95	91.304	ENSVPAG00000007024	SBNO1	95	91.304	Vicugna_pacos
ENSMOCG00000009390	Sbno1	100	97.331	ENSVVUG00000027807	SBNO1	100	93.692	Vulpes_vulpes
ENSMOCG00000009390	Sbno1	99	91.444	ENSXETG00000031930	SBNO1	95	91.444	Xenopus_tropicalis
ENSMOCG00000009390	Sbno1	87	82.785	ENSXCOG00000011607	sbno1	91	82.785	Xiphophorus_couchianus
ENSMOCG00000009390	Sbno1	99	82.796	ENSXMAG00000002140	sbno1	95	82.796	Xiphophorus_maculatus