EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000009518 (Gene tree)
Gene ID: 101997390
Gene Symbol: Ciao1
Alias: Wdr39
Full Name: cytosolic iron-sulfur assembly component 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 6044 bases
Position: chrJH996428.1:35618984-35625027
Accession: 101997390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000009376	eIF2A	PF08662.11	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000012234	-	2059	XM_005364428	ENSMOCP00000009371	339 (aa)	XP_005364485	UPI00038BD820
ENSMOCT00000012240	-	531	-	ENSMOCP00000009376	177 (aa)	-	-
ENSMOCT00000012242	-	702	-	ENSMOCP00000009378	233 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000009518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000009518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000009518	Ciao1	82	34.815	ENSMOCG00000013826	Wdr5	82	34.815
ENSMOCG00000009518	Ciao1	87	39.474	ENSMOCG00000015822	Poc1b	64	35.644
ENSMOCG00000009518	Ciao1	90	35.354	ENSMOCG00000003396	Poc1a	80	35.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000009518	Ciao1	99	62.874	ENSCING00000006781	-	99	62.874	Ciona_intestinalis
ENSMOCG00000009518	Ciao1	99	61.677	ENSCSAVG00000003355	-	99	61.677	Ciona_savignyi
ENSMOCG00000009518	Ciao1	99	95.429	ENSCGRG00001016622	Ciao1	99	95.429	Cricetulus_griseus_chok1gshd
ENSMOCG00000009518	Ciao1	94	78.313	ENSMZEG00005010812	ciao1	100	78.313	Maylandia_zebra
ENSMOCG00000009518	Ciao1	99	96.571	ENSMAUG00000021994	Ciao1	99	96.571	Mesocricetus_auratus
ENSMOCG00000009518	Ciao1	94	81.928	ENSMALG00000002097	ciao1	99	81.928	Monopterus_albus
ENSMOCG00000009518	Ciao1	99	96.591	MGP_CAROLIEiJ_G0024251	Ciao1	100	96.591	Mus_caroli
ENSMOCG00000009518	Ciao1	99	96.023	ENSMUSG00000003662	Ciao1	100	96.023	Mus_musculus
ENSMOCG00000009518	Ciao1	99	96.591	MGP_PahariEiJ_G0025696	Ciao1	100	96.591	Mus_pahari
ENSMOCG00000009518	Ciao1	99	96.023	MGP_SPRETEiJ_G0025171	Ciao1	100	96.023	Mus_spretus
ENSMOCG00000009518	Ciao1	99	94.857	ENSPEMG00000015800	Ciao1	99	94.857	Peromyscus_maniculatus_bairdii