EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000009815 (Gene tree)
Gene ID: 101998084
Gene Symbol: Ddx28
Alias: 2410004K13Rik|Mddx28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 1623 bases
Position: chr4:4885251-4886873
Accession: 101998084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000009628	DEAD	PF00270.29	1.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000012596	-	1623	XM_005345432	ENSMOCP00000009628	540 (aa)	XP_005345489	UPI00038C3DFE

Gene Model

Click here to download ENSMOCG00000009815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000009815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000009815	Ddx28	67	38.710	ENSMOCG00000000257	Ddx1	53	38.710
ENSMOCG00000009815	Ddx28	68	30.458	ENSMOCG00000018690	Ddx49	72	30.458
ENSMOCG00000009815	Ddx28	67	32.432	ENSMOCG00000016551	Ddx59	54	32.432
ENSMOCG00000009815	Ddx28	67	31.593	ENSMOCG00000012124	Ddx5	55	31.694
ENSMOCG00000009815	Ddx28	72	32.824	ENSMOCG00000003693	Ddx47	78	32.824
ENSMOCG00000009815	Ddx28	73	32.061	ENSMOCG00000012956	Ddx43	56	32.061
ENSMOCG00000009815	Ddx28	72	37.383	ENSMOCG00000017297	-	94	37.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000009815	Ddx28	99	80.855	ENSG00000182810	DDX28	99	80.855	Homo_sapiens
ENSMOCG00000009815	Ddx28	94	48.743	ENSAPOG00000000991	ddx28	89	48.743	Acanthochromis_polyacanthus
ENSMOCG00000009815	Ddx28	99	80.519	ENSAMEG00000019426	DDX28	99	79.406	Ailuropoda_melanoleuca
ENSMOCG00000009815	Ddx28	93	48.738	ENSACIG00000021615	ddx28	90	48.738	Amphilophus_citrinellus
ENSMOCG00000009815	Ddx28	94	49.323	ENSAOCG00000004610	ddx28	89	49.323	Amphiprion_ocellaris
ENSMOCG00000009815	Ddx28	94	49.130	ENSAPEG00000002143	ddx28	89	49.130	Amphiprion_percula
ENSMOCG00000009815	Ddx28	95	50.288	ENSATEG00000018691	ddx28	91	50.288	Anabas_testudineus
ENSMOCG00000009815	Ddx28	95	54.669	ENSACAG00000009755	DDX28	94	54.669	Anolis_carolinensis
ENSMOCG00000009815	Ddx28	93	47.860	ENSACLG00000012984	ddx28	89	47.860	Astatotilapia_calliptera
ENSMOCG00000009815	Ddx28	95	48.872	ENSAMXG00000005878	ddx28	92	48.872	Astyanax_mexicanus
ENSMOCG00000009815	Ddx28	99	81.076	ENSBTAG00000004290	DDX28	99	81.076	Bos_taurus
ENSMOCG00000009815	Ddx28	98	81.285	ENSCAFG00000020327	DDX28	99	81.096	Canis_familiaris
ENSMOCG00000009815	Ddx28	98	81.285	ENSCAFG00020019785	DDX28	99	81.096	Canis_lupus_dingo
ENSMOCG00000009815	Ddx28	96	80.925	ENSCHIG00000009658	DDX28	99	80.483	Capra_hircus
ENSMOCG00000009815	Ddx28	100	80.000	ENSCPOG00000013746	DDX28	97	80.998	Cavia_porcellus
ENSMOCG00000009815	Ddx28	99	79.035	ENSCSAG00000018472	DDX28	99	79.035	Chlorocebus_sabaeus
ENSMOCG00000009815	Ddx28	90	59.063	ENSCPBG00000012105	DDX28	85	60.093	Chrysemys_picta_bellii
ENSMOCG00000009815	Ddx28	68	40.323	ENSCSAVG00000006341	-	94	40.323	Ciona_savignyi
ENSMOCG00000009815	Ddx28	97	92.176	ENSCGRG00001024412	Ddx28	100	92.366	Cricetulus_griseus_chok1gshd
ENSMOCG00000009815	Ddx28	95	49.133	ENSCSEG00000011651	ddx28	90	49.133	Cynoglossus_semilaevis
ENSMOCG00000009815	Ddx28	94	50.489	ENSCVAG00000004044	ddx28	90	50.489	Cyprinodon_variegatus
ENSMOCG00000009815	Ddx28	93	49.902	ENSDARG00000060411	ddx28	90	49.902	Danio_rerio
ENSMOCG00000009815	Ddx28	68	82.609	ENSDNOG00000033593	DDX28	99	82.609	Dasypus_novemcinctus
ENSMOCG00000009815	Ddx28	99	80.519	ENSDORG00000028868	Ddx28	99	80.519	Dipodomys_ordii
ENSMOCG00000009815	Ddx28	88	34.917	FBgn0086130	Dbp21E2	87	34.774	Drosophila_melanogaster
ENSMOCG00000009815	Ddx28	100	78.889	ENSETEG00000001062	-	100	78.889	Echinops_telfairi
ENSMOCG00000009815	Ddx28	79	44.792	ENSEBUG00000004791	ddx28	70	45.078	Eptatretus_burgeri
ENSMOCG00000009815	Ddx28	99	83.117	ENSEASG00005020387	DDX28	99	83.117	Equus_asinus_asinus
ENSMOCG00000009815	Ddx28	99	83.117	ENSECAG00000006451	DDX28	99	83.117	Equus_caballus
ENSMOCG00000009815	Ddx28	78	72.076	ENSEEUG00000005017	DDX28	96	72.506	Erinaceus_europaeus
ENSMOCG00000009815	Ddx28	93	50.487	ENSELUG00000005302	ddx28	97	50.193	Esox_lucius
ENSMOCG00000009815	Ddx28	99	81.633	ENSFCAG00000012858	DDX28	99	81.633	Felis_catus
ENSMOCG00000009815	Ddx28	94	51.072	ENSFHEG00000012573	ddx28	91	51.072	Fundulus_heteroclitus
ENSMOCG00000009815	Ddx28	93	48.928	ENSGMOG00000017045	ddx28	95	48.928	Gadus_morhua
ENSMOCG00000009815	Ddx28	94	50.382	ENSGALG00000048700	DDX28	89	51.326	Gallus_gallus
ENSMOCG00000009815	Ddx28	94	48.833	ENSGAFG00000009249	ddx28	90	48.833	Gambusia_affinis
ENSMOCG00000009815	Ddx28	99	48.257	ENSGACG00000016367	ddx28	94	49.805	Gasterosteus_aculeatus
ENSMOCG00000009815	Ddx28	79	59.028	ENSGAGG00000004565	DDX28	94	59.028	Gopherus_agassizii
ENSMOCG00000009815	Ddx28	99	81.227	ENSGGOG00000001220	DDX28	99	81.227	Gorilla_gorilla
ENSMOCG00000009815	Ddx28	93	49.611	ENSHBUG00000001016	ddx28	90	49.611	Haplochromis_burtoni
ENSMOCG00000009815	Ddx28	94	46.718	ENSHCOG00000017590	ddx28	92	46.718	Hippocampus_comes
ENSMOCG00000009815	Ddx28	94	49.421	ENSIPUG00000017350	Ddx28	90	49.228	Ictalurus_punctatus
ENSMOCG00000009815	Ddx28	100	80.556	ENSSTOG00000002064	DDX28	100	80.556	Ictidomys_tridecemlineatus
ENSMOCG00000009815	Ddx28	100	80.996	ENSJJAG00000012460	-	100	80.996	Jaculus_jaculus
ENSMOCG00000009815	Ddx28	97	48.211	ENSKMAG00000018183	ddx28	91	48.842	Kryptolebias_marmoratus
ENSMOCG00000009815	Ddx28	94	49.027	ENSLBEG00000006072	ddx28	90	49.027	Labrus_bergylta
ENSMOCG00000009815	Ddx28	93	55.336	ENSLACG00000005578	DDX28	82	56.394	Latimeria_chalumnae
ENSMOCG00000009815	Ddx28	95	54.198	ENSLOCG00000017604	ddx28	92	54.198	Lepisosteus_oculatus
ENSMOCG00000009815	Ddx28	99	82.375	ENSLAFG00000031239	DDX28	99	82.375	Loxodonta_africana
ENSMOCG00000009815	Ddx28	99	79.406	ENSMMUG00000010836	DDX28	99	79.406	Macaca_mulatta
ENSMOCG00000009815	Ddx28	93	49.515	ENSMAMG00000020220	ddx28	90	49.515	Mastacembelus_armatus
ENSMOCG00000009815	Ddx28	93	49.805	ENSMZEG00005009292	ddx28	90	49.805	Maylandia_zebra
ENSMOCG00000009815	Ddx28	96	69.349	ENSMICG00000012346	-	99	69.444	Microcebus_murinus
ENSMOCG00000009815	Ddx28	94	49.708	ENSMMOG00000000270	ddx28	91	49.708	Mola_mola
ENSMOCG00000009815	Ddx28	96	70.986	ENSMODG00000005303	DDX28	94	71.291	Monodelphis_domestica
ENSMOCG00000009815	Ddx28	94	49.133	ENSMALG00000008864	ddx28	90	49.133	Monopterus_albus
ENSMOCG00000009815	Ddx28	100	88.704	MGP_CAROLIEiJ_G0031510	Ddx28	100	88.704	Mus_caroli
ENSMOCG00000009815	Ddx28	100	89.444	ENSMUSG00000045538	Ddx28	100	89.444	Mus_musculus
ENSMOCG00000009815	Ddx28	100	90.370	MGP_PahariEiJ_G0023110	Ddx28	100	90.370	Mus_pahari
ENSMOCG00000009815	Ddx28	100	89.444	MGP_SPRETEiJ_G0032628	Ddx28	100	89.444	Mus_spretus
ENSMOCG00000009815	Ddx28	75	80.397	ENSMPUG00000006915	DDX28	100	80.397	Mustela_putorius_furo
ENSMOCG00000009815	Ddx28	98	80.189	ENSMLUG00000005899	DDX28	98	80.189	Myotis_lucifugus
ENSMOCG00000009815	Ddx28	99	85.316	ENSNGAG00000015762	Ddx28	99	85.688	Nannospalax_galili
ENSMOCG00000009815	Ddx28	93	49.609	ENSNBRG00000001337	ddx28	91	49.609	Neolamprologus_brichardi
ENSMOCG00000009815	Ddx28	93	50.195	ENSONIG00000020597	ddx28	90	50.195	Oreochromis_niloticus
ENSMOCG00000009815	Ddx28	51	65.343	ENSOANG00000003551	-	96	65.343	Ornithorhynchus_anatinus
ENSMOCG00000009815	Ddx28	100	80.185	ENSOCUG00000023074	DDX28	100	80.185	Oryctolagus_cuniculus
ENSMOCG00000009815	Ddx28	99	47.532	ENSORLG00000011968	ddx28	90	49.412	Oryzias_latipes
ENSMOCG00000009815	Ddx28	97	47.925	ENSORLG00020001951	ddx28	91	49.216	Oryzias_latipes_hni
ENSMOCG00000009815	Ddx28	93	48.627	ENSORLG00015023030	ddx28	91	48.627	Oryzias_latipes_hsok
ENSMOCG00000009815	Ddx28	94	48.638	ENSOMEG00000012445	ddx28	90	48.638	Oryzias_melastigma
ENSMOCG00000009815	Ddx28	97	80.608	ENSOGAG00000016895	DDX28	99	80.370	Otolemur_garnettii
ENSMOCG00000009815	Ddx28	82	77.703	ENSOARG00000003313	DDX28	99	77.703	Ovis_aries
ENSMOCG00000009815	Ddx28	99	77.695	ENSPPAG00000036971	DDX28	99	77.695	Pan_paniscus
ENSMOCG00000009815	Ddx28	99	82.931	ENSPPRG00000018322	DDX28	99	82.931	Panthera_pardus
ENSMOCG00000009815	Ddx28	99	79.221	ENSPTIG00000006444	DDX28	99	79.221	Panthera_tigris_altaica
ENSMOCG00000009815	Ddx28	99	81.227	ENSPTRG00000008258	DDX28	99	81.227	Pan_troglodytes
ENSMOCG00000009815	Ddx28	93	51.946	ENSPKIG00000021200	ddx28	93	51.751	Paramormyrops_kingsleyae
ENSMOCG00000009815	Ddx28	55	64.189	ENSPSIG00000001127	DDX28	97	64.189	Pelodiscus_sinensis
ENSMOCG00000009815	Ddx28	92	47.036	ENSPMGG00000007908	ddx28	88	47.036	Periophthalmus_magnuspinnatus
ENSMOCG00000009815	Ddx28	100	91.144	ENSPEMG00000003395	Ddx28	100	91.144	Peromyscus_maniculatus_bairdii
ENSMOCG00000009815	Ddx28	52	50.883	ENSPMAG00000006983	DDX28	93	50.883	Petromyzon_marinus
ENSMOCG00000009815	Ddx28	94	49.612	ENSPFOG00000020838	DDX28	90	49.612	Poecilia_formosa
ENSMOCG00000009815	Ddx28	94	49.612	ENSPFOG00000020952	ddx28	89	49.612	Poecilia_formosa
ENSMOCG00000009815	Ddx28	94	49.806	ENSPLAG00000016292	ddx28	89	49.806	Poecilia_latipinna
ENSMOCG00000009815	Ddx28	94	49.612	ENSPMEG00000011311	ddx28	88	49.612	Poecilia_mexicana
ENSMOCG00000009815	Ddx28	94	49.609	ENSPREG00000002899	ddx28	88	49.609	Poecilia_reticulata
ENSMOCG00000009815	Ddx28	99	80.855	ENSPPYG00000007481	DDX28	100	80.855	Pongo_abelii
ENSMOCG00000009815	Ddx28	100	82.994	ENSPCOG00000024632	DDX28	100	82.994	Propithecus_coquereli
ENSMOCG00000009815	Ddx28	93	49.805	ENSPNYG00000018804	ddx28	90	49.805	Pundamilia_nyererei
ENSMOCG00000009815	Ddx28	93	50.870	ENSPNAG00000014597	ddx28	94	50.677	Pygocentrus_nattereri
ENSMOCG00000009815	Ddx28	99	89.610	ENSRNOG00000019817	Ddx28	99	89.610	Rattus_norvegicus
ENSMOCG00000009815	Ddx28	93	50.484	ENSSFOG00015010181	ddx28	92	50.484	Scleropages_formosus
ENSMOCG00000009815	Ddx28	93	49.222	ENSSMAG00000006831	ddx28	90	51.025	Scophthalmus_maximus
ENSMOCG00000009815	Ddx28	93	48.544	ENSSDUG00000003257	ddx28	89	48.544	Seriola_dumerili
ENSMOCG00000009815	Ddx28	93	48.148	ENSSLDG00000004513	ddx28	89	48.148	Seriola_lalandi_dorsalis
ENSMOCG00000009815	Ddx28	99	79.406	ENSSARG00000014169	DDX28	99	79.406	Sorex_araneus
ENSMOCG00000009815	Ddx28	99	47.417	ENSSPAG00000000988	ddx28	91	48.940	Stegastes_partitus
ENSMOCG00000009815	Ddx28	99	81.633	ENSSSCG00000026038	DDX28	99	81.633	Sus_scrofa
ENSMOCG00000009815	Ddx28	94	49.507	ENSTRUG00000007815	ddx28	92	49.507	Takifugu_rubripes
ENSMOCG00000009815	Ddx28	94	49.704	ENSTNIG00000011352	ddx28	99	49.704	Tetraodon_nigroviridis
ENSMOCG00000009815	Ddx28	87	86.758	ENSTBEG00000017695	DDX28	87	87.156	Tupaia_belangeri
ENSMOCG00000009815	Ddx28	99	82.375	ENSUAMG00000016116	DDX28	99	82.375	Ursus_americanus
ENSMOCG00000009815	Ddx28	81	82.989	ENSUMAG00000019200	DDX28	89	82.989	Ursus_maritimus
ENSMOCG00000009815	Ddx28	81	78.539	ENSVVUG00000012876	DDX28	87	78.311	Vulpes_vulpes
ENSMOCG00000009815	Ddx28	94	50.098	ENSXETG00000005435	ddx28	93	51.363	Xenopus_tropicalis
ENSMOCG00000009815	Ddx28	94	49.612	ENSXCOG00000012364	ddx28	90	49.612	Xiphophorus_couchianus
ENSMOCG00000009815	Ddx28	93	50.000	ENSXMAG00000019603	ddx28	91	50.000	Xiphophorus_maculatus