EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000009898 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S18c%2C mitochondrial pseudogene
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 426 bases
Position: chrJH996431.1:36993968-36994393
Accession: 101980940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000009703	Ribosomal_S18	PF01084.20	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000012698	-	426	-	ENSMOCP00000009703	141 (aa)	-	UPI00038C2F61

Gene Model

Click here to download ENSMOCG00000009898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000009898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000009898	-	100	96.454	ENSMOCG00000015591	-	100	96.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000009898	-	100	79.167	ENSG00000163319	MRPS18C	100	79.167	Homo_sapiens
ENSMOCG00000009898	-	100	70.833	ENSAMEG00000004915	MRPS18C	100	70.833	Ailuropoda_melanoleuca
ENSMOCG00000009898	-	99	67.114	ENSANAG00000025323	-	94	67.114	Aotus_nancymaae
ENSMOCG00000009898	-	100	69.444	ENSANAG00000028055	-	100	69.444	Aotus_nancymaae
ENSMOCG00000009898	-	100	54.167	ENSBTAG00000049836	-	100	54.167	Bos_taurus
ENSMOCG00000009898	-	100	76.389	ENSBTAG00000018155	MRPS18C	100	76.389	Bos_taurus
ENSMOCG00000009898	-	100	80.556	ENSCJAG00000042247	MRPS18C	97	80.556	Callithrix_jacchus
ENSMOCG00000009898	-	100	77.778	ENSCAFG00020010491	MRPS18C	100	77.778	Canis_lupus_dingo
ENSMOCG00000009898	-	74	68.571	ENSCHIG00000019359	-	98	68.571	Capra_hircus
ENSMOCG00000009898	-	100	65.278	ENSCHIG00000022740	-	100	65.278	Capra_hircus
ENSMOCG00000009898	-	89	83.333	ENSCHIG00000004461	-	87	83.333	Capra_hircus
ENSMOCG00000009898	-	99	60.563	ENSCHIG00000018805	-	99	60.563	Capra_hircus
ENSMOCG00000009898	-	100	49.306	ENSCHIG00000016551	-	100	49.306	Capra_hircus
ENSMOCG00000009898	-	100	75.694	ENSTSYG00000012924	MRPS18C	100	75.694	Carlito_syrichta
ENSMOCG00000009898	-	100	76.389	ENSCPOG00000009198	MRPS18C	100	76.389	Cavia_porcellus
ENSMOCG00000009898	-	99	66.901	ENSCCAG00000025155	-	94	66.901	Cebus_capucinus
ENSMOCG00000009898	-	100	70.213	ENSCCAG00000028283	-	100	70.213	Cebus_capucinus
ENSMOCG00000009898	-	100	77.083	ENSCCAG00000019347	-	100	77.083	Cebus_capucinus
ENSMOCG00000009898	-	100	79.861	ENSCCAG00000026577	-	100	79.861	Cebus_capucinus
ENSMOCG00000009898	-	100	80.556	ENSCATG00000040697	MRPS18C	100	80.556	Cercocebus_atys
ENSMOCG00000009898	-	100	77.397	ENSCLAG00000008205	-	100	77.397	Chinchilla_lanigera
ENSMOCG00000009898	-	100	77.778	ENSCLAG00000017397	-	100	77.778	Chinchilla_lanigera
ENSMOCG00000009898	-	100	80.556	ENSCANG00000038907	MRPS18C	100	80.556	Colobus_angolensis_palliatus
ENSMOCG00000009898	-	99	60.140	ENSCANG00000037347	-	100	58.333	Colobus_angolensis_palliatus
ENSMOCG00000009898	-	100	68.056	ENSCANG00000041165	-	100	68.056	Colobus_angolensis_palliatus
ENSMOCG00000009898	-	100	88.652	ENSCGRG00001000103	Mrps18c	100	88.652	Cricetulus_griseus_chok1gshd
ENSMOCG00000009898	-	100	88.652	ENSCGRG00000002192	Mrps18c	100	88.652	Cricetulus_griseus_crigri
ENSMOCG00000009898	-	99	78.169	ENSDORG00000012749	Mrps18c	100	78.169	Dipodomys_ordii
ENSMOCG00000009898	-	100	50.694	ENSETEG00000012223	-	100	50.694	Echinops_telfairi
ENSMOCG00000009898	-	100	81.119	ENSEASG00005013234	MRPS18C	100	81.119	Equus_asinus_asinus
ENSMOCG00000009898	-	100	81.818	ENSECAG00000020387	MRPS18C	100	81.818	Equus_caballus
ENSMOCG00000009898	-	100	56.250	ENSEEUG00000003504	MRPS18C	99	56.250	Erinaceus_europaeus
ENSMOCG00000009898	-	100	79.861	ENSFCAG00000042464	MRPS18C	100	79.861	Felis_catus
ENSMOCG00000009898	-	100	63.889	ENSFDAG00000008778	-	100	63.889	Fukomys_damarensis
ENSMOCG00000009898	-	100	76.389	ENSFDAG00000000250	-	100	76.389	Fukomys_damarensis
ENSMOCG00000009898	-	100	61.111	ENSGGOG00000040785	-	100	61.111	Gorilla_gorilla
ENSMOCG00000009898	-	100	52.778	ENSGGOG00000037903	-	100	52.778	Gorilla_gorilla
ENSMOCG00000009898	-	100	66.667	ENSGGOG00000008603	MRPS18C	100	66.667	Gorilla_gorilla
ENSMOCG00000009898	-	100	72.222	ENSHGLG00000020134	-	100	72.222	Heterocephalus_glaber_female
ENSMOCG00000009898	-	100	71.631	ENSHGLG00000012671	-	98	71.631	Heterocephalus_glaber_female
ENSMOCG00000009898	-	100	76.712	ENSHGLG00000002953	-	100	76.712	Heterocephalus_glaber_female
ENSMOCG00000009898	-	100	71.631	ENSHGLG00100015568	-	98	71.631	Heterocephalus_glaber_male
ENSMOCG00000009898	-	100	76.712	ENSHGLG00100016235	-	100	76.712	Heterocephalus_glaber_male
ENSMOCG00000009898	-	100	72.222	ENSHGLG00100019678	-	100	72.222	Heterocephalus_glaber_male
ENSMOCG00000009898	-	100	76.923	ENSSTOG00000007989	MRPS18C	100	76.923	Ictidomys_tridecemlineatus
ENSMOCG00000009898	-	51	86.111	ENSJJAG00000022437	Mrps18c	74	86.111	Jaculus_jaculus
ENSMOCG00000009898	-	100	75.000	ENSLAFG00000001059	MRPS18C	100	75.000	Loxodonta_africana
ENSMOCG00000009898	-	100	64.583	ENSMFAG00000041276	-	100	64.583	Macaca_fascicularis
ENSMOCG00000009898	-	100	81.250	ENSMFAG00000003991	MRPS18C	100	81.250	Macaca_fascicularis
ENSMOCG00000009898	-	100	70.139	ENSMMUG00000039146	-	100	70.139	Macaca_mulatta
ENSMOCG00000009898	-	100	70.833	ENSMMUG00000048717	-	100	70.833	Macaca_mulatta
ENSMOCG00000009898	-	100	64.583	ENSMMUG00000015353	MRPS18C	100	64.583	Macaca_mulatta
ENSMOCG00000009898	-	100	81.250	ENSMNEG00000043663	MRPS18C	100	81.250	Macaca_nemestrina
ENSMOCG00000009898	-	100	61.111	ENSMNEG00000018700	-	100	61.111	Macaca_nemestrina
ENSMOCG00000009898	-	100	80.556	ENSMLEG00000038884	MRPS18C	100	80.556	Mandrillus_leucophaeus
ENSMOCG00000009898	-	100	59.028	ENSMICG00000037615	-	100	59.028	Microcebus_murinus
ENSMOCG00000009898	-	100	76.389	ENSMICG00000032609	-	100	76.389	Microcebus_murinus
ENSMOCG00000009898	-	97	71.127	ENSMODG00000020773	MRPS18C	99	71.127	Monodelphis_domestica
ENSMOCG00000009898	-	100	83.217	MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.217	Mus_caroli
ENSMOCG00000009898	-	100	81.818	ENSMUSG00000016833	Mrps18c	100	81.818	Mus_musculus
ENSMOCG00000009898	-	100	84.615	MGP_PahariEiJ_G0017236	Mrps18c	100	84.615	Mus_pahari
ENSMOCG00000009898	-	83	82.353	MGP_SPRETEiJ_G0028455	Mrps18c	93	82.353	Mus_spretus
ENSMOCG00000009898	-	100	78.472	ENSMLUG00000017057	MRPS18C	100	78.472	Myotis_lucifugus
ENSMOCG00000009898	-	91	85.156	ENSNGAG00000015980	Mrps18c	100	82.979	Nannospalax_galili
ENSMOCG00000009898	-	100	79.167	ENSNLEG00000009119	MRPS18C	100	79.167	Nomascus_leucogenys
ENSMOCG00000009898	-	100	73.611	ENSNLEG00000018188	-	100	73.611	Nomascus_leucogenys
ENSMOCG00000009898	-	68	73.469	ENSOPRG00000004113	MRPS18C	68	73.469	Ochotona_princeps
ENSMOCG00000009898	-	100	78.472	ENSODEG00000020349	-	100	78.472	Octodon_degus
ENSMOCG00000009898	-	100	76.712	ENSODEG00000007599	-	100	76.712	Octodon_degus
ENSMOCG00000009898	-	100	77.083	ENSOARG00000002770	MRPS18C	100	77.083	Ovis_aries
ENSMOCG00000009898	-	100	54.167	ENSPPAG00000037400	-	100	54.167	Pan_paniscus
ENSMOCG00000009898	-	100	79.167	ENSPPAG00000037122	MRPS18C	100	79.167	Pan_paniscus
ENSMOCG00000009898	-	100	79.167	ENSPPRG00000011089	MRPS18C	100	79.167	Panthera_pardus
ENSMOCG00000009898	-	100	78.472	ENSPTIG00000021242	MRPS18C	100	78.472	Panthera_tigris_altaica
ENSMOCG00000009898	-	100	52.778	ENSPTRG00000047058	-	100	52.778	Pan_troglodytes
ENSMOCG00000009898	-	100	79.167	ENSPTRG00000016233	MRPS18C	100	79.167	Pan_troglodytes
ENSMOCG00000009898	-	100	79.861	ENSPANG00000033931	MRPS18C	100	79.861	Papio_anubis
ENSMOCG00000009898	-	100	70.139	ENSPANG00000034202	-	100	70.139	Papio_anubis
ENSMOCG00000009898	-	100	87.234	ENSPEMG00000008390	Mrps18c	100	87.234	Peromyscus_maniculatus_bairdii
ENSMOCG00000009898	-	80	68.142	ENSPCIG00000000097	-	80	68.142	Phascolarctos_cinereus
ENSMOCG00000009898	-	72	85.294	ENSPCIG00000019737	-	100	85.294	Phascolarctos_cinereus
ENSMOCG00000009898	-	91	73.684	ENSPCIG00000005376	-	93	73.684	Phascolarctos_cinereus
ENSMOCG00000009898	-	100	80.556	ENSPPYG00000025867	MRPS18C	100	80.556	Pongo_abelii
ENSMOCG00000009898	-	99	76.224	ENSPPYG00000025835	-	100	76.224	Pongo_abelii
ENSMOCG00000009898	-	100	77.778	ENSPCAG00000004975	MRPS18C	100	77.778	Procavia_capensis
ENSMOCG00000009898	-	100	79.167	ENSPCOG00000017634	MRPS18C	100	79.167	Propithecus_coquereli
ENSMOCG00000009898	-	68	75.758	ENSPVAG00000006439	MRPS18C	100	75.758	Pteropus_vampyrus
ENSMOCG00000009898	-	100	79.021	ENSRNOG00000002178	Mrps18c	100	79.021	Rattus_norvegicus
ENSMOCG00000009898	-	100	80.556	ENSRBIG00000041685	MRPS18C	100	80.556	Rhinopithecus_bieti
ENSMOCG00000009898	-	100	54.167	ENSRBIG00000031637	-	100	54.167	Rhinopithecus_bieti
ENSMOCG00000009898	-	100	72.917	ENSRBIG00000035023	-	100	72.917	Rhinopithecus_bieti
ENSMOCG00000009898	-	100	54.167	ENSRROG00000030722	-	100	54.167	Rhinopithecus_roxellana
ENSMOCG00000009898	-	100	72.917	ENSRROG00000033834	-	100	72.917	Rhinopithecus_roxellana
ENSMOCG00000009898	-	100	80.556	ENSRROG00000044334	MRPS18C	100	80.556	Rhinopithecus_roxellana
ENSMOCG00000009898	-	100	60.417	ENSSBOG00000029234	-	100	60.417	Saimiri_boliviensis_boliviensis
ENSMOCG00000009898	-	95	66.418	ENSSBOG00000032292	-	98	66.418	Saimiri_boliviensis_boliviensis
ENSMOCG00000009898	-	99	69.718	ENSSBOG00000022205	-	92	69.718	Saimiri_boliviensis_boliviensis
ENSMOCG00000009898	-	100	79.861	ENSSBOG00000027568	-	100	79.861	Saimiri_boliviensis_boliviensis
ENSMOCG00000009898	-	92	76.471	ENSSHAG00000007084	MRPS18C	94	76.471	Sarcophilus_harrisii
ENSMOCG00000009898	-	100	79.167	ENSSSCG00000038042	MRPS18C	100	79.167	Sus_scrofa
ENSMOCG00000009898	-	100	76.389	ENSTBEG00000012505	MRPS18C	100	76.389	Tupaia_belangeri
ENSMOCG00000009898	-	100	81.944	ENSTTRG00000004897	MRPS18C	100	81.944	Tursiops_truncatus
ENSMOCG00000009898	-	100	81.250	ENSUAMG00000012878	MRPS18C	100	81.250	Ursus_americanus
ENSMOCG00000009898	-	100	81.250	ENSUMAG00000008829	MRPS18C	100	81.250	Ursus_maritimus
ENSMOCG00000009898	-	100	80.556	ENSVPAG00000011358	MRPS18C	100	80.556	Vicugna_pacos
ENSMOCG00000009898	-	100	78.472	ENSVVUG00000015672	MRPS18C	100	78.472	Vulpes_vulpes