EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000010087 (Gene tree)
Gene ID
101990494
Gene Symbol
Patl1
Alias
Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Plus strand
Length
33582 bases
Position
chrJH996486.1:2037810-2071391
Accession
101990494
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000009891PAT1PF09770.94.6e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000012948-4080XM_005369676ENSMOCP00000009891770 (aa)XP_005369733UPI00038BE4D8
Gene Model
Click here to download ENSMOCG00000010087's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000010087's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000010087Patl15536.279ENSMOCG00000015367Patl27236.816
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000010087Patl16335.102ENSG00000229474PATL29937.637Homo_sapiens
ENSMOCG00000010087Patl110096.364ENSG00000166889PATL110096.364Homo_sapiens
ENSMOCG00000010087Patl16834.254ENSAPOG00000022988patl27333.886Acanthochromis_polyacanthus
ENSMOCG00000010087Patl18553.477ENSAPOG00000021290patl19848.765Acanthochromis_polyacanthus
ENSMOCG00000010087Patl110094.812ENSAMEG00000014215PATL110093.904Ailuropoda_melanoleuca
ENSMOCG00000010087Patl15336.408ENSAMEG00000014997PATL27536.408Ailuropoda_melanoleuca
ENSMOCG00000010087Patl19646.005ENSACIG00000005182patl19946.335Amphilophus_citrinellus
ENSMOCG00000010087Patl16934.483ENSAOCG00000023738patl25634.304Amphiprion_ocellaris
ENSMOCG00000010087Patl16634.170ENSAPEG00000011299patl27133.858Amphiprion_percula
ENSMOCG00000010087Patl16263.077ENSAPEG00000021391patl17964.615Amphiprion_percula
ENSMOCG00000010087Patl19163.333ENSATEG00000002230patl18066.667Anabas_testudineus
ENSMOCG00000010087Patl16434.387ENSATEG00000019567patl27034.122Anabas_testudineus
ENSMOCG00000010087Patl17171.014ENSAPLG00000013394PATL19971.038Anas_platyrhynchos
ENSMOCG00000010087Patl15339.225ENSAPLG00000003980PATL26439.225Anas_platyrhynchos
ENSMOCG00000010087Patl19980.415ENSACAG00000006607PATL19979.637Anolis_carolinensis
ENSMOCG00000010087Patl110096.623ENSANAG00000023078PATL110096.623Aotus_nancymaae
ENSMOCG00000010087Patl18732.106ENSACLG00000010326patl25437.767Astatotilapia_calliptera
ENSMOCG00000010087Patl16266.667ENSACLG00000005144patl18350.617Astatotilapia_calliptera
ENSMOCG00000010087Patl16435.630ENSAMXG00000020293patl26734.393Astyanax_mexicanus
ENSMOCG00000010087Patl19940.932ENSAMXG00000010731patl19946.191Astyanax_mexicanus
ENSMOCG00000010087Patl110095.071ENSBTAG00000005913PATL110095.071Bos_taurus
ENSMOCG00000010087Patl16335.031ENSCJAG00000002379PATL27237.440Callithrix_jacchus
ENSMOCG00000010087Patl110096.364ENSCJAG00000016192PATL110096.364Callithrix_jacchus
ENSMOCG00000010087Patl110095.590ENSCAFG00000007581PATL110094.682Canis_familiaris
ENSMOCG00000010087Patl16435.573ENSCAFG00000013629PATL27237.440Canis_familiaris
ENSMOCG00000010087Patl16435.644ENSCAFG00020022169PATL27237.440Canis_lupus_dingo
ENSMOCG00000010087Patl19995.556ENSCAFG00020001648PATL110094.641Canis_lupus_dingo
ENSMOCG00000010087Patl110093.515ENSCHIG00000025913PATL110093.515Capra_hircus
ENSMOCG00000010087Patl15638.761ENSCHIG00000026665PATL27438.902Capra_hircus
ENSMOCG00000010087Patl19995.698ENSTSYG00000012748PATL19695.698Carlito_syrichta
ENSMOCG00000010087Patl110090.674ENSCAPG00000013668PATL19990.674Cavia_aperea
ENSMOCG00000010087Patl110088.987ENSCPOG00000006827PATL110089.114Cavia_porcellus
ENSMOCG00000010087Patl110096.623ENSCCAG00000023759PATL110096.623Cebus_capucinus
ENSMOCG00000010087Patl110096.494ENSCATG00000009629PATL110096.494Cercocebus_atys
ENSMOCG00000010087Patl19992.157ENSCLAG00000003427PATL110092.157Chinchilla_lanigera
ENSMOCG00000010087Patl15135.459ENSCLAG00000014407PATL27335.459Chinchilla_lanigera
ENSMOCG00000010087Patl19096.978ENSCSAG00000006095PATL110096.978Chlorocebus_sabaeus
ENSMOCG00000010087Patl16895.960ENSCHOG00000001611PATL18395.960Choloepus_hoffmanni
ENSMOCG00000010087Patl15339.806ENSCPBG00000006150PATL25939.806Chrysemys_picta_bellii
ENSMOCG00000010087Patl16334.827ENSCANG00000013856PATL28534.908Colobus_angolensis_palliatus
ENSMOCG00000010087Patl19996.619ENSCANG00000039197PATL19996.707Colobus_angolensis_palliatus
ENSMOCG00000010087Patl110098.701ENSCGRG00001024927Patl110098.701Cricetulus_griseus_chok1gshd
ENSMOCG00000010087Patl110098.184ENSCGRG00000000461Patl110098.693Cricetulus_griseus_crigri
ENSMOCG00000010087Patl16234.979ENSCSEG00000009438patl26334.568Cynoglossus_semilaevis
ENSMOCG00000010087Patl19265.000ENSCSEG00000008261patl18256.977Cynoglossus_semilaevis
ENSMOCG00000010087Patl18951.559ENSCVAG00000006664patl110046.641Cyprinodon_variegatus
ENSMOCG00000010087Patl16030.962ENSCVAG00000016203patl26331.323Cyprinodon_variegatus
ENSMOCG00000010087Patl19947.209ENSDARG00000017423patl110046.683Danio_rerio
ENSMOCG00000010087Patl16735.150ENSDARG00000089567patl26435.516Danio_rerio
ENSMOCG00000010087Patl19989.034ENSDNOG00000038865PATL19894.291Dasypus_novemcinctus
ENSMOCG00000010087Patl15137.084ENSDORG00000026649Patl27237.084Dipodomys_ordii
ENSMOCG00000010087Patl110095.584ENSDORG00000000237Patl110095.584Dipodomys_ordii
ENSMOCG00000010087Patl110095.337ENSEASG00005007963PATL110095.337Equus_asinus_asinus
ENSMOCG00000010087Patl110095.207ENSECAG00000011411PATL110095.207Equus_caballus
ENSMOCG00000010087Patl18958.730ENSELUG00000024249patl18068.333Esox_lucius
ENSMOCG00000010087Patl16934.019ENSELUG00000023244patl25436.842Esox_lucius
ENSMOCG00000010087Patl16234.898ENSFCAG00000027170PATL27336.232Felis_catus
ENSMOCG00000010087Patl110095.584ENSFCAG00000015573PATL110095.584Felis_catus
ENSMOCG00000010087Patl19980.704ENSFALG00000012150PATL19980.704Ficedula_albicollis
ENSMOCG00000010087Patl19992.026ENSFDAG00000016128PATL110091.765Fukomys_damarensis
ENSMOCG00000010087Patl15134.673ENSFDAG00000012242PATL27336.432Fukomys_damarensis
ENSMOCG00000010087Patl16266.667ENSFHEG00000017790patl18361.972Fundulus_heteroclitus
ENSMOCG00000010087Patl15733.632ENSGMOG00000005666patl29935.000Gadus_morhua
ENSMOCG00000010087Patl19978.039ENSGALG00000042641PATL110077.908Gallus_gallus
ENSMOCG00000010087Patl16460.563ENSGAFG00000006508patl110046.012Gambusia_affinis
ENSMOCG00000010087Patl19730.719ENSGAFG00000019344patl25538.129Gambusia_affinis
ENSMOCG00000010087Patl19948.201ENSGACG00000016448patl19949.936Gasterosteus_aculeatus
ENSMOCG00000010087Patl110083.959ENSGAGG00000004461PATL110084.241Gopherus_agassizii
ENSMOCG00000010087Patl110096.364ENSGGOG00000004335PATL110096.364Gorilla_gorilla
ENSMOCG00000010087Patl16335.510ENSGGOG00000025923PATL28534.908Gorilla_gorilla
ENSMOCG00000010087Patl16266.667ENSHBUG00000005365patl18350.617Haplochromis_burtoni
ENSMOCG00000010087Patl16235.391ENSHBUG00000005929patl26137.055Haplochromis_burtoni
ENSMOCG00000010087Patl110093.506ENSHGLG00000018173PATL110093.506Heterocephalus_glaber_female
ENSMOCG00000010087Patl19991.895ENSHGLG00100003453PATL110091.895Heterocephalus_glaber_male
ENSMOCG00000010087Patl19453.165ENSHCOG00000001898patl18253.165Hippocampus_comes
ENSMOCG00000010087Patl19930.895ENSHCOG00000016754patl26034.792Hippocampus_comes
ENSMOCG00000010087Patl16733.146ENSIPUG00000020692patl25835.129Ictalurus_punctatus
ENSMOCG00000010087Patl15437.831ENSSTOG00000033848PATL27237.831Ictidomys_tridecemlineatus
ENSMOCG00000010087Patl19895.910ENSSTOG00000013764PATL19995.910Ictidomys_tridecemlineatus
ENSMOCG00000010087Patl19995.026ENSJJAG00000010135Patl110095.026Jaculus_jaculus
ENSMOCG00000010087Patl16233.542ENSKMAG00000021275patl25435.308Kryptolebias_marmoratus
ENSMOCG00000010087Patl16260.000ENSKMAG00000020848patl18063.333Kryptolebias_marmoratus
ENSMOCG00000010087Patl16135.491ENSLBEG00000022344patl25835.062Labrus_bergylta
ENSMOCG00000010087Patl19168.333ENSLBEG00000023617patl17968.333Labrus_bergylta
ENSMOCG00000010087Patl19831.425ENSLACG00000005291-9730.918Latimeria_chalumnae
ENSMOCG00000010087Patl19857.087ENSLACG00000004640PATL19956.550Latimeria_chalumnae
ENSMOCG00000010087Patl19947.683ENSLOCG00000000717patl19948.049Lepisosteus_oculatus
ENSMOCG00000010087Patl110095.590ENSLAFG00000015161PATL110095.590Loxodonta_africana
ENSMOCG00000010087Patl15138.363ENSLAFG00000031124PATL27138.363Loxodonta_africana
ENSMOCG00000010087Patl110096.494ENSMFAG00000040851PATL110096.494Macaca_fascicularis
ENSMOCG00000010087Patl110096.494ENSMMUG00000017287PATL110096.494Macaca_mulatta
ENSMOCG00000010087Patl110096.494ENSMNEG00000038692PATL110096.494Macaca_nemestrina
ENSMOCG00000010087Patl110096.364ENSMLEG00000030044PATL110096.364Mandrillus_leucophaeus
ENSMOCG00000010087Patl16134.322ENSMAMG00000013327patl26135.492Mastacembelus_armatus
ENSMOCG00000010087Patl19645.828ENSMAMG00000003950patl19847.441Mastacembelus_armatus
ENSMOCG00000010087Patl16266.667ENSMZEG00005013404patl18350.617Maylandia_zebra
ENSMOCG00000010087Patl18732.106ENSMZEG00005014292patl25437.767Maylandia_zebra
ENSMOCG00000010087Patl19277.949ENSMGAG00000003406PATL19976.934Meleagris_gallopavo
ENSMOCG00000010087Patl15339.467ENSMGAG00000001309PATL26439.467Meleagris_gallopavo
ENSMOCG00000010087Patl19576.301ENSMAUG00000012059Patl19776.301Mesocricetus_auratus
ENSMOCG00000010087Patl19992.308ENSMICG00000004172PATL19896.994Microcebus_murinus
ENSMOCG00000010087Patl19946.263ENSMMOG00000013711patl110045.278Mola_mola
ENSMOCG00000010087Patl16230.398ENSMMOG00000001299patl26032.057Mola_mola
ENSMOCG00000010087Patl16236.327ENSMODG00000017690PATL27136.993Monodelphis_domestica
ENSMOCG00000010087Patl110088.342ENSMODG00000020201PATL110087.694Monodelphis_domestica
ENSMOCG00000010087Patl19439.236ENSMALG00000018706patl15355.764Monopterus_albus
ENSMOCG00000010087Patl15434.845ENSMALG00000008131patl25234.845Monopterus_albus
ENSMOCG00000010087Patl110096.753MGP_CAROLIEiJ_G0022739Patl110096.753Mus_caroli
ENSMOCG00000010087Patl110096.883ENSMUSG00000046139Patl110096.883Mus_musculus
ENSMOCG00000010087Patl110096.753MGP_PahariEiJ_G0014233Patl110096.753Mus_pahari
ENSMOCG00000010087Patl110097.013MGP_SPRETEiJ_G0023652Patl110097.013Mus_spretus
ENSMOCG00000010087Patl110095.720ENSMPUG00000014607PATL110094.812Mustela_putorius_furo
ENSMOCG00000010087Patl110092.996ENSMLUG00000011169PATL110092.607Myotis_lucifugus
ENSMOCG00000010087Patl110095.349ENSNGAG00000003682Patl110095.349Nannospalax_galili
ENSMOCG00000010087Patl16235.185ENSNBRG00000011745patl25836.817Neolamprologus_brichardi
ENSMOCG00000010087Patl16335.306ENSNLEG00000005673PATL28534.639Nomascus_leucogenys
ENSMOCG00000010087Patl19993.063ENSNLEG00000013081PATL110092.932Nomascus_leucogenys
ENSMOCG00000010087Patl16790.968ENSMEUG00000009391PATL18990.968Notamacropus_eugenii
ENSMOCG00000010087Patl16895.960ENSOPRG00000007963PATL18095.960Ochotona_princeps
ENSMOCG00000010087Patl17390.040ENSODEG00000001792PATL19591.319Octodon_degus
ENSMOCG00000010087Patl16266.667ENSONIG00000004170patl110048.254Oreochromis_niloticus
ENSMOCG00000010087Patl16236.756ENSONIG00000011519patl25438.298Oreochromis_niloticus
ENSMOCG00000010087Patl15287.406ENSOANG00000011117-9787.406Ornithorhynchus_anatinus
ENSMOCG00000010087Patl15137.871ENSOANG00000001538-8438.025Ornithorhynchus_anatinus
ENSMOCG00000010087Patl16134.672ENSOCUG00000006339PATL27436.500Oryctolagus_cuniculus
ENSMOCG00000010087Patl110096.753ENSOCUG00000002156PATL110096.753Oryctolagus_cuniculus
ENSMOCG00000010087Patl16433.597ENSORLG00000005780patl26034.232Oryzias_latipes
ENSMOCG00000010087Patl16433.992ENSORLG00020016506patl26133.728Oryzias_latipes_hni
ENSMOCG00000010087Patl16433.794ENSORLG00015014500patl26333.531Oryzias_latipes_hsok
ENSMOCG00000010087Patl18732.164ENSOMEG00000021628patl26235.331Oryzias_melastigma
ENSMOCG00000010087Patl15435.835ENSOGAG00000004709PATL27235.835Otolemur_garnettii
ENSMOCG00000010087Patl110096.623ENSOGAG00000004351PATL110096.623Otolemur_garnettii
ENSMOCG00000010087Patl16136.211ENSOARG00000003762PATL27237.778Ovis_aries
ENSMOCG00000010087Patl19993.603ENSOARG00000012005PATL19693.603Ovis_aries
ENSMOCG00000010087Patl110096.494ENSPPAG00000034275PATL110096.494Pan_paniscus
ENSMOCG00000010087Patl16335.438ENSPPAG00000007221PATL28434.702Pan_paniscus
ENSMOCG00000010087Patl16234.694ENSPPRG00000004279PATL27335.990Panthera_pardus
ENSMOCG00000010087Patl19995.425ENSPPRG00000020639PATL110095.425Panthera_pardus
ENSMOCG00000010087Patl110095.455ENSPTIG00000019298PATL110095.455Panthera_tigris_altaica
ENSMOCG00000010087Patl16234.490ENSPTIG00000018964PATL27335.749Panthera_tigris_altaica
ENSMOCG00000010087Patl19987.696ENSPTRG00000003697PATL110087.696Pan_troglodytes
ENSMOCG00000010087Patl16335.102ENSPTRG00000041536PATL28434.497Pan_troglodytes
ENSMOCG00000010087Patl110096.494ENSPANG00000035620PATL110096.494Papio_anubis
ENSMOCG00000010087Patl19946.569ENSPKIG00000016224patl19947.672Paramormyrops_kingsleyae
ENSMOCG00000010087Patl15437.470ENSPSIG00000017690PATL29536.609Pelodiscus_sinensis
ENSMOCG00000010087Patl110083.829ENSPSIG00000016206PATL19683.312Pelodiscus_sinensis
ENSMOCG00000010087Patl16266.667ENSPMGG00000002644patl19945.510Periophthalmus_magnuspinnatus
ENSMOCG00000010087Patl15935.220ENSPMGG00000014550patl26336.105Periophthalmus_magnuspinnatus
ENSMOCG00000010087Patl15834.934ENSPEMG00000016509Patl27036.829Peromyscus_maniculatus_bairdii
ENSMOCG00000010087Patl110098.701ENSPEMG00000014215Patl110098.701Peromyscus_maniculatus_bairdii
ENSMOCG00000010087Patl110088.212ENSPCIG00000010852PATL110087.565Phascolarctos_cinereus
ENSMOCG00000010087Patl16533.929ENSPCIG00000018256PATL27636.881Phascolarctos_cinereus
ENSMOCG00000010087Patl110046.467ENSPFOG00000007768patl110046.786Poecilia_formosa
ENSMOCG00000010087Patl19730.995ENSPFOG00000007305patl25437.650Poecilia_formosa
ENSMOCG00000010087Patl15553.682ENSPLAG00000018465patl17550.989Poecilia_latipinna
ENSMOCG00000010087Patl19731.209ENSPLAG00000020713patl25437.650Poecilia_latipinna
ENSMOCG00000010087Patl18449.924ENSPMEG00000006555patl17550.302Poecilia_mexicana
ENSMOCG00000010087Patl19731.695ENSPMEG00000018942patl25437.650Poecilia_mexicana
ENSMOCG00000010087Patl17348.336ENSPREG00000003874patl17050.263Poecilia_reticulata
ENSMOCG00000010087Patl110096.883ENSPPYG00000003230PATL110096.883Pongo_abelii
ENSMOCG00000010087Patl110096.364ENSPCOG00000020770PATL110096.364Propithecus_coquereli
ENSMOCG00000010087Patl15337.923ENSPCOG00000000295PATL29939.011Propithecus_coquereli
ENSMOCG00000010087Patl18590.701ENSPVAG00000015239PATL110090.244Pteropus_vampyrus
ENSMOCG00000010087Patl17853.172ENSPNYG00000018936patl19753.153Pundamilia_nyererei
ENSMOCG00000010087Patl16234.979ENSPNYG00000017381patl26136.580Pundamilia_nyererei
ENSMOCG00000010087Patl19945.663ENSPNAG00000017907patl19946.988Pygocentrus_nattereri
ENSMOCG00000010087Patl16235.565ENSPNAG00000002315patl26334.728Pygocentrus_nattereri
ENSMOCG00000010087Patl110096.623ENSRNOG00000021052Patl110096.623Rattus_norvegicus
ENSMOCG00000010087Patl110085.963ENSRBIG00000032263PATL110085.963Rhinopithecus_bieti
ENSMOCG00000010087Patl110096.623ENSRROG00000032861PATL110096.623Rhinopithecus_roxellana
ENSMOCG00000010087Patl110096.494ENSSBOG00000025195PATL110096.494Saimiri_boliviensis_boliviensis
ENSMOCG00000010087Patl110088.760ENSSHAG00000004309PATL110088.114Sarcophilus_harrisii
ENSMOCG00000010087Patl18632.988ENSSFOG00015000720patl25537.204Scleropages_formosus
ENSMOCG00000010087Patl19944.471ENSSFOG00015009614patl19946.852Scleropages_formosus
ENSMOCG00000010087Patl16534.263ENSSMAG00000017262patl27433.597Scophthalmus_maximus
ENSMOCG00000010087Patl19161.667ENSSMAG00000009482patl18153.086Scophthalmus_maximus
ENSMOCG00000010087Patl16235.391ENSSDUG00000022927patl26034.433Seriola_dumerili
ENSMOCG00000010087Patl19268.333ENSSDUG00000005362patl17960.563Seriola_dumerili
ENSMOCG00000010087Patl19266.667ENSSLDG00000019146patl17959.155Seriola_lalandi_dorsalis
ENSMOCG00000010087Patl16834.082ENSSLDG00000017922patl25936.538Seriola_lalandi_dorsalis
ENSMOCG00000010087Patl15136.896ENSSARG00000009047PATL27636.896Sorex_araneus
ENSMOCG00000010087Patl18095.274ENSSARG00000009600PATL18095.274Sorex_araneus
ENSMOCG00000010087Patl110081.971ENSSPUG00000009453PATL110081.193Sphenodon_punctatus
ENSMOCG00000010087Patl15453.237ENSSPAG00000003187patl19847.030Stegastes_partitus
ENSMOCG00000010087Patl15934.672ENSSPAG00000004784patl26235.446Stegastes_partitus
ENSMOCG00000010087Patl110096.109ENSSSCG00000013124PATL110096.109Sus_scrofa
ENSMOCG00000010087Patl15236.973ENSTGUG00000004619-9837.624Taeniopygia_guttata
ENSMOCG00000010087Patl19980.130ENSTGUG00000006222PATL110080.130Taeniopygia_guttata
ENSMOCG00000010087Patl16234.511ENSTRUG00000005647patl26234.719Takifugu_rubripes
ENSMOCG00000010087Patl19161.667ENSTRUG00000000709patl19944.649Takifugu_rubripes
ENSMOCG00000010087Patl19094.172ENSTBEG00000000796PATL19094.172Tupaia_belangeri
ENSMOCG00000010087Patl17296.154ENSTTRG00000009389PATL18496.154Tursiops_truncatus
ENSMOCG00000010087Patl16235.174ENSUAMG00000018533PATL27136.715Ursus_americanus
ENSMOCG00000010087Patl19995.395ENSUMAG00000018634PATL110094.828Ursus_maritimus
ENSMOCG00000010087Patl16235.378ENSUMAG00000007738PATL27136.715Ursus_maritimus
ENSMOCG00000010087Patl16597.222ENSVPAG00000009224PATL17697.222Vicugna_pacos
ENSMOCG00000010087Patl19995.437ENSVVUG00000016668PATL110095.977Vulpes_vulpes
ENSMOCG00000010087Patl16435.644ENSVVUG00000011576PATL27237.440Vulpes_vulpes
ENSMOCG00000010087Patl15337.470ENSXETG00000014167patl27535.223Xenopus_tropicalis
ENSMOCG00000010087Patl17961.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSMOCG00000010087Patl19730.241ENSXMAG00000018464patl25437.410Xiphophorus_maculatus
ENSMOCG00000010087Patl15553.791ENSXMAG00000013834patl17550.912Xiphophorus_maculatus

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