EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000010360 (Gene tree)
Gene ID: 102002335
Gene Symbol: Naf1
Alias: LOC234344
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 33036 bases
Position: chrJH996453.1:3578088-3611123
Accession: 102002335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000010166	Gar1	PF04410.14	8.4e-44	1	1
ENSMOCP00000010165	Gar1	PF04410.14	8.7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000013312	-	1403	XM_005367758	ENSMOCP00000010165	463 (aa)	XP_005367815	UPI00038C4D6E
ENSMOCT00000013315	-	1368	-	ENSMOCP00000010166	455 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000010360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000010360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000010360	Naf1	100	71.862	ENSG00000145414	NAF1	95	90.000	Homo_sapiens
ENSMOCG00000010360	Naf1	100	71.370	ENSAMEG00000014688	NAF1	100	70.393	Ailuropoda_melanoleuca
ENSMOCG00000010360	Naf1	67	54.232	ENSAPLG00000003210	NAF1	88	55.305	Anas_platyrhynchos
ENSMOCG00000010360	Naf1	100	71.687	ENSANAG00000025253	NAF1	93	90.000	Aotus_nancymaae
ENSMOCG00000010360	Naf1	75	70.029	ENSBTAG00000034700	NAF1	65	86.752	Bos_taurus
ENSMOCG00000010360	Naf1	100	68.482	ENSCJAG00000012406	NAF1	95	87.500	Callithrix_jacchus
ENSMOCG00000010360	Naf1	64	78.378	ENSCAFG00000029679	NAF1	99	77.365	Canis_familiaris
ENSMOCG00000010360	Naf1	100	70.947	ENSCAFG00020005334	NAF1	100	69.345	Canis_lupus_dingo
ENSMOCG00000010360	Naf1	76	68.927	ENSCHIG00000018430	NAF1	63	86.266	Capra_hircus
ENSMOCG00000010360	Naf1	92	75.000	ENSTSYG00000005946	NAF1	88	92.105	Carlito_syrichta
ENSMOCG00000010360	Naf1	76	80.791	ENSCAPG00000017838	NAF1	94	79.661	Cavia_aperea
ENSMOCG00000010360	Naf1	100	70.482	ENSCPOG00000010331	NAF1	100	68.952	Cavia_porcellus
ENSMOCG00000010360	Naf1	100	72.121	ENSCCAG00000030023	NAF1	95	90.000	Cebus_capucinus
ENSMOCG00000010360	Naf1	100	70.482	ENSCATG00000022663	NAF1	95	90.000	Cercocebus_atys
ENSMOCG00000010360	Naf1	100	74.026	ENSCLAG00000017209	NAF1	76	83.668	Chinchilla_lanigera
ENSMOCG00000010360	Naf1	100	70.281	ENSCSAG00000003199	NAF1	70	83.095	Chlorocebus_sabaeus
ENSMOCG00000010360	Naf1	60	83.755	ENSCHOG00000011393	NAF1	57	82.979	Choloepus_hoffmanni
ENSMOCG00000010360	Naf1	64	59.477	ENSCPBG00000003379	NAF1	72	57.895	Chrysemys_picta_bellii
ENSMOCG00000010360	Naf1	100	70.541	ENSCANG00000039151	NAF1	95	90.000	Colobus_angolensis_palliatus
ENSMOCG00000010360	Naf1	100	89.032	ENSCGRG00001018484	Naf1	100	87.124	Cricetulus_griseus_chok1gshd
ENSMOCG00000010360	Naf1	76	87.320	ENSCGRG00000001742	Naf1	95	85.879	Cricetulus_griseus_crigri
ENSMOCG00000010360	Naf1	72	43.072	ENSDARG00000057929	naf1	54	45.775	Danio_rerio
ENSMOCG00000010360	Naf1	94	72.318	ENSDNOG00000031106	NAF1	100	70.183	Dasypus_novemcinctus
ENSMOCG00000010360	Naf1	100	73.134	ENSDORG00000011327	Naf1	100	74.836	Dipodomys_ordii
ENSMOCG00000010360	Naf1	76	51.841	ENSETEG00000002872	-	72	51.841	Echinops_telfairi
ENSMOCG00000010360	Naf1	100	71.111	ENSEASG00005022201	NAF1	100	69.091	Equus_asinus_asinus
ENSMOCG00000010360	Naf1	100	71.111	ENSECAG00000016738	NAF1	100	69.091	Equus_caballus
ENSMOCG00000010360	Naf1	66	67.857	ENSEEUG00000008335	-	99	64.968	Erinaceus_europaeus
ENSMOCG00000010360	Naf1	100	69.715	ENSFCAG00000031652	NAF1	100	68.313	Felis_catus
ENSMOCG00000010360	Naf1	64	57.843	ENSFALG00000011110	NAF1	66	57.372	Ficedula_albicollis
ENSMOCG00000010360	Naf1	100	75.319	ENSFDAG00000007497	NAF1	78	85.185	Fukomys_damarensis
ENSMOCG00000010360	Naf1	65	57.468	ENSGALG00000009496	NAF1	71	57.188	Gallus_gallus
ENSMOCG00000010360	Naf1	100	72.470	ENSGGOG00000000894	NAF1	95	90.000	Gorilla_gorilla
ENSMOCG00000010360	Naf1	100	72.634	ENSHGLG00000014899	NAF1	100	72.222	Heterocephalus_glaber_female
ENSMOCG00000010360	Naf1	100	72.634	ENSHGLG00100007507	NAF1	100	72.222	Heterocephalus_glaber_male
ENSMOCG00000010360	Naf1	100	72.301	ENSSTOG00000023858	NAF1	71	85.303	Ictidomys_tridecemlineatus
ENSMOCG00000010360	Naf1	76	79.539	ENSJJAG00000012147	-	94	78.674	Jaculus_jaculus
ENSMOCG00000010360	Naf1	73	53.191	ENSKMAG00000005434	-	58	42.525	Kryptolebias_marmoratus
ENSMOCG00000010360	Naf1	74	61.497	ENSLOCG00000007989	NAF1	68	50.357	Lepisosteus_oculatus
ENSMOCG00000010360	Naf1	68	69.159	ENSLAFG00000009193	-	100	69.279	Loxodonta_africana
ENSMOCG00000010360	Naf1	100	70.482	ENSMFAG00000040952	NAF1	95	90.000	Macaca_fascicularis
ENSMOCG00000010360	Naf1	100	70.281	ENSMMUG00000001717	NAF1	95	90.000	Macaca_mulatta
ENSMOCG00000010360	Naf1	100	70.482	ENSMNEG00000032677	NAF1	95	90.000	Macaca_nemestrina
ENSMOCG00000010360	Naf1	100	70.968	ENSMLEG00000035330	NAF1	95	90.000	Mandrillus_leucophaeus
ENSMOCG00000010360	Naf1	61	57.288	ENSMGAG00000002133	NAF1	91	56.766	Meleagris_gallopavo
ENSMOCG00000010360	Naf1	100	81.978	ENSMAUG00000013072	Naf1	100	84.061	Mesocricetus_auratus
ENSMOCG00000010360	Naf1	100	70.363	ENSMICG00000038661	NAF1	91	89.744	Microcebus_murinus
ENSMOCG00000010360	Naf1	63	48.013	ENSMODG00000028980	-	54	52.590	Monodelphis_domestica
ENSMOCG00000010360	Naf1	93	87.437	MGP_CAROLIEiJ_G0031097	Naf1	73	85.337	Mus_caroli
ENSMOCG00000010360	Naf1	98	86.990	ENSMUSG00000014907	Naf1	68	83.654	Mus_musculus
ENSMOCG00000010360	Naf1	100	79.032	MGP_PahariEiJ_G0021563	-	100	76.578	Mus_pahari
ENSMOCG00000010360	Naf1	88	73.756	MGP_SPRETEiJ_G0032213	-	75	84.225	Mus_spretus
ENSMOCG00000010360	Naf1	100	70.842	ENSMPUG00000001861	NAF1	100	67.828	Mustela_putorius_furo
ENSMOCG00000010360	Naf1	93	66.231	ENSMLUG00000004627	NAF1	100	67.762	Myotis_lucifugus
ENSMOCG00000010360	Naf1	100	79.787	ENSNGAG00000023833	Naf1	100	77.342	Nannospalax_galili
ENSMOCG00000010360	Naf1	77	72.539	ENSNLEG00000006459	-	95	90.000	Nomascus_leucogenys
ENSMOCG00000010360	Naf1	100	75.054	ENSODEG00000006528	NAF1	100	73.434	Octodon_degus
ENSMOCG00000010360	Naf1	57	73.180	ENSOANG00000014157	-	77	65.517	Ornithorhynchus_anatinus
ENSMOCG00000010360	Naf1	100	68.519	ENSOCUG00000000485	NAF1	65	82.278	Oryctolagus_cuniculus
ENSMOCG00000010360	Naf1	54	47.755	ENSORLG00000002191	-	57	38.806	Oryzias_latipes
ENSMOCG00000010360	Naf1	54	47.755	ENSORLG00015012985	-	57	40.698	Oryzias_latipes_hsok
ENSMOCG00000010360	Naf1	55	45.200	ENSOMEG00000021322	-	51	43.617	Oryzias_melastigma
ENSMOCG00000010360	Naf1	100	69.936	ENSOARG00000013716	NAF1	76	78.797	Ovis_aries
ENSMOCG00000010360	Naf1	100	72.470	ENSPPAG00000034674	NAF1	95	90.000	Pan_paniscus
ENSMOCG00000010360	Naf1	100	69.106	ENSPPRG00000003688	NAF1	100	68.519	Panthera_pardus
ENSMOCG00000010360	Naf1	100	69.106	ENSPTIG00000017246	NAF1	100	68.519	Panthera_tigris_altaica
ENSMOCG00000010360	Naf1	100	72.470	ENSPTRG00000016560	NAF1	95	90.000	Pan_troglodytes
ENSMOCG00000010360	Naf1	100	69.478	ENSPANG00000015574	NAF1	95	90.000	Papio_anubis
ENSMOCG00000010360	Naf1	64	58.766	ENSPSIG00000006545	NAF1	80	59.283	Pelodiscus_sinensis
ENSMOCG00000010360	Naf1	81	93.188	ENSPEMG00000014321	Naf1	91	92.795	Peromyscus_maniculatus_bairdii
ENSMOCG00000010360	Naf1	64	82.474	ENSPPYG00000029771	-	99	82.131	Pongo_abelii
ENSMOCG00000010360	Naf1	100	68.283	ENSPVAG00000016222	NAF1	100	67.879	Pteropus_vampyrus
ENSMOCG00000010360	Naf1	100	85.345	ENSRNOG00000026403	Naf1	100	84.483	Rattus_norvegicus
ENSMOCG00000010360	Naf1	100	69.574	ENSRBIG00000030027	NAF1	95	90.000	Rhinopithecus_bieti
ENSMOCG00000010360	Naf1	100	71.515	ENSRROG00000040912	NAF1	95	90.000	Rhinopithecus_roxellana
ENSMOCG00000010360	Naf1	100	71.371	ENSSBOG00000002085	NAF1	95	90.000	Saimiri_boliviensis_boliviensis
ENSMOCG00000010360	Naf1	61	57.860	ENSSPUG00000004087	NAF1	93	56.646	Sphenodon_punctatus
ENSMOCG00000010360	Naf1	92	69.457	ENSSSCG00000008887	NAF1	100	71.800	Sus_scrofa
ENSMOCG00000010360	Naf1	51	85.294	ENSTBEG00000017005	-	62	85.294	Tupaia_belangeri
ENSMOCG00000010360	Naf1	100	70.172	ENSTTRG00000010106	NAF1	78	79.429	Tursiops_truncatus
ENSMOCG00000010360	Naf1	100	70.722	ENSUAMG00000017043	NAF1	100	68.519	Ursus_americanus
ENSMOCG00000010360	Naf1	100	69.857	ENSUMAG00000019748	NAF1	100	68.313	Ursus_maritimus
ENSMOCG00000010360	Naf1	51	86.522	ENSVPAG00000007182	-	91	86.522	Vicugna_pacos
ENSMOCG00000010360	Naf1	76	79.096	ENSVVUG00000022303	NAF1	96	78.249	Vulpes_vulpes