EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000011049 (Gene tree)
Gene ID: 101991839
Gene Symbol: Chd5
Alias: 4930532L22Rik|B230399N07Rik
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 53060 bases
Position: chr10:80434127-80487186
Accession: 101991839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000010855	ResIII	PF04851.15	1.3e-07	1	1
ENSMOCP00000010844	ResIII	PF04851.15	1.3e-07	1	1
ENSMOCP00000010843	ResIII	PF04851.15	1.3e-07	1	1
ENSMOCP00000010850	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000014249	-	5733	-	ENSMOCP00000010855	1910 (aa)	-	UPI00038BEC22
ENSMOCT00000014236	-	5829	-	ENSMOCP00000010844	1942 (aa)	-	-
ENSMOCT00000014235	-	9340	XM_005353641	ENSMOCP00000010843	1947 (aa)	XP_005353698	UPI00038C4CA9
ENSMOCT00000014243	-	6570	-	ENSMOCP00000010850	2189 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000011049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000011049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000011049	Chd5	93	72.593	ENSMOCG00000020624	Chd4	96	72.406
ENSMOCG00000011049	Chd5	97	70.266	ENSMOCG00000004848	Chd3	96	70.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000011049	Chd5	100	94.575	ENSG00000116254	CHD5	100	94.729	Homo_sapiens
ENSMOCG00000011049	Chd5	99	94.136	ENSAMEG00000009880	CHD5	99	93.974	Ailuropoda_melanoleuca
ENSMOCG00000011049	Chd5	96	77.309	ENSACIG00000012582	chd5	98	79.011	Amphilophus_citrinellus
ENSMOCG00000011049	Chd5	95	79.605	ENSAOCG00000020356	chd5	93	79.182	Amphiprion_ocellaris
ENSMOCG00000011049	Chd5	94	81.226	ENSAPLG00000015475	CHD5	98	81.368	Anas_platyrhynchos
ENSMOCG00000011049	Chd5	99	82.718	ENSACAG00000002441	CHD5	99	81.944	Anolis_carolinensis
ENSMOCG00000011049	Chd5	87	95.033	ENSANAG00000001078	CHD5	91	95.033	Aotus_nancymaae
ENSMOCG00000011049	Chd5	95	75.527	ENSACLG00000003012	chd5	99	74.207	Astatotilapia_calliptera
ENSMOCG00000011049	Chd5	84	85.772	ENSAMXG00000008921	chd5	97	82.685	Astyanax_mexicanus
ENSMOCG00000011049	Chd5	93	95.600	ENSBTAG00000040477	CHD5	100	95.600	Bos_taurus
ENSMOCG00000011049	Chd5	100	94.422	ENSCJAG00000000101	CHD5	100	94.575	Callithrix_jacchus
ENSMOCG00000011049	Chd5	93	95.762	ENSCAFG00000019545	CHD5	100	95.487	Canis_familiaris
ENSMOCG00000011049	Chd5	99	94.935	ENSCAFG00020008689	CHD5	97	94.778	Canis_lupus_dingo
ENSMOCG00000011049	Chd5	99	93.808	ENSCHIG00000015027	CHD5	99	92.367	Capra_hircus
ENSMOCG00000011049	Chd5	98	89.376	ENSTSYG00000033991	CHD5	99	90.304	Carlito_syrichta
ENSMOCG00000011049	Chd5	99	94.339	ENSCAPG00000009294	CHD5	99	95.077	Cavia_aperea
ENSMOCG00000011049	Chd5	99	94.339	ENSCPOG00000025080	CHD5	99	95.077	Cavia_porcellus
ENSMOCG00000011049	Chd5	100	94.729	ENSCCAG00000024756	CHD5	100	94.729	Cebus_capucinus
ENSMOCG00000011049	Chd5	100	93.910	ENSCATG00000043011	CHD5	100	94.063	Cercocebus_atys
ENSMOCG00000011049	Chd5	99	94.550	ENSCLAG00000010589	CHD5	99	95.236	Chinchilla_lanigera
ENSMOCG00000011049	Chd5	100	94.882	ENSCSAG00000000733	CHD5	100	95.036	Chlorocebus_sabaeus
ENSMOCG00000011049	Chd5	93	89.687	ENSCPBG00000019363	CHD5	100	89.578	Chrysemys_picta_bellii
ENSMOCG00000011049	Chd5	99	94.920	ENSCANG00000032302	CHD5	99	95.067	Colobus_angolensis_palliatus
ENSMOCG00000011049	Chd5	55	98.679	ENSCGRG00001011042	Chd5	100	98.679	Cricetulus_griseus_chok1gshd
ENSMOCG00000011049	Chd5	99	98.143	ENSCGRG00000011341	Chd5	100	98.143	Cricetulus_griseus_crigri
ENSMOCG00000011049	Chd5	96	78.394	ENSDARG00000105083	chd5	97	80.429	Danio_rerio
ENSMOCG00000011049	Chd5	94	67.704	ENSDARG00000025789	chd4b	96	67.808	Danio_rerio
ENSMOCG00000011049	Chd5	100	90.583	ENSDNOG00000046342	CHD5	100	90.430	Dasypus_novemcinctus
ENSMOCG00000011049	Chd5	99	94.186	ENSDORG00000005923	Chd5	99	94.976	Dipodomys_ordii
ENSMOCG00000011049	Chd5	99	93.439	ENSEASG00005021464	CHD5	99	96.735	Equus_asinus_asinus
ENSMOCG00000011049	Chd5	99	92.861	ENSECAG00000025043	CHD5	98	97.984	Equus_caballus
ENSMOCG00000011049	Chd5	77	98.140	ENSEEUG00000002772	CHD5	77	98.140	Erinaceus_europaeus
ENSMOCG00000011049	Chd5	95	79.238	ENSELUG00000010742	chd5	90	91.163	Esox_lucius
ENSMOCG00000011049	Chd5	100	94.678	ENSFCAG00000006319	CHD5	100	94.473	Felis_catus
ENSMOCG00000011049	Chd5	99	87.397	ENSFALG00000009740	CHD5	99	87.332	Ficedula_albicollis
ENSMOCG00000011049	Chd5	99	93.947	ENSFDAG00000012881	CHD5	96	94.669	Fukomys_damarensis
ENSMOCG00000011049	Chd5	100	86.276	ENSGALG00000000747	CHD5	100	86.684	Gallus_gallus
ENSMOCG00000011049	Chd5	57	82.705	ENSGACG00000004389	chd5	93	82.889	Gasterosteus_aculeatus
ENSMOCG00000011049	Chd5	88	96.020	ENSGAGG00000001590	CHD5	99	95.122	Gopherus_agassizii
ENSMOCG00000011049	Chd5	99	94.603	ENSGGOG00000000708	CHD5	99	94.756	Gorilla_gorilla
ENSMOCG00000011049	Chd5	96	75.746	ENSHBUG00000013453	chd5	99	75.756	Haplochromis_burtoni
ENSMOCG00000011049	Chd5	100	94.063	ENSHGLG00000018184	CHD5	100	94.731	Heterocephalus_glaber_female
ENSMOCG00000011049	Chd5	99	87.818	ENSHGLG00100013261	CHD5	98	87.767	Heterocephalus_glaber_male
ENSMOCG00000011049	Chd5	94	79.282	ENSIPUG00000005446	chd5	98	79.324	Ictalurus_punctatus
ENSMOCG00000011049	Chd5	99	94.339	ENSSTOG00000002778	CHD5	99	95.659	Ictidomys_tridecemlineatus
ENSMOCG00000011049	Chd5	100	96.025	ENSJJAG00000019072	Chd5	100	96.025	Jaculus_jaculus
ENSMOCG00000011049	Chd5	96	82.805	ENSLOCG00000004944	chd5	95	81.552	Lepisosteus_oculatus
ENSMOCG00000011049	Chd5	99	95.275	ENSLAFG00000006348	CHD5	99	95.275	Loxodonta_africana
ENSMOCG00000011049	Chd5	99	94.715	ENSMFAG00000033993	CHD5	100	95.377	Macaca_fascicularis
ENSMOCG00000011049	Chd5	99	94.813	ENSMMUG00000016838	CHD5	99	94.964	Macaca_mulatta
ENSMOCG00000011049	Chd5	100	94.882	ENSMNEG00000040044	CHD5	100	95.036	Macaca_nemestrina
ENSMOCG00000011049	Chd5	99	91.347	ENSMLEG00000039166	CHD5	99	91.496	Mandrillus_leucophaeus
ENSMOCG00000011049	Chd5	95	74.973	ENSMZEG00005000841	chd5	91	81.111	Maylandia_zebra
ENSMOCG00000011049	Chd5	99	86.278	ENSMGAG00000001055	CHD5	99	86.738	Meleagris_gallopavo
ENSMOCG00000011049	Chd5	100	90.569	ENSMICG00000017862	CHD5	99	92.728	Microcebus_murinus
ENSMOCG00000011049	Chd5	91	80.433	ENSMODG00000006294	CHD5	82	94.111	Monodelphis_domestica
ENSMOCG00000011049	Chd5	95	78.419	ENSMALG00000002831	chd5	99	77.370	Monopterus_albus
ENSMOCG00000011049	Chd5	100	97.691	MGP_CAROLIEiJ_G0026857	Chd5	100	97.691	Mus_caroli
ENSMOCG00000011049	Chd5	100	97.493	ENSMUSG00000005045	Chd5	100	97.493	Mus_musculus
ENSMOCG00000011049	Chd5	100	97.646	MGP_PahariEiJ_G0029205	Chd5	100	97.646	Mus_pahari
ENSMOCG00000011049	Chd5	100	97.646	MGP_SPRETEiJ_G0027850	Chd5	100	97.646	Mus_spretus
ENSMOCG00000011049	Chd5	99	90.196	ENSMPUG00000007122	CHD5	96	94.534	Mustela_putorius_furo
ENSMOCG00000011049	Chd5	99	94.751	ENSNGAG00000019812	Chd5	99	94.138	Nannospalax_galili
ENSMOCG00000011049	Chd5	99	92.280	ENSNLEG00000010320	CHD5	99	92.264	Nomascus_leucogenys
ENSMOCG00000011049	Chd5	86	87.072	ENSOPRG00000004304	CHD5	87	87.833	Ochotona_princeps
ENSMOCG00000011049	Chd5	99	94.133	ENSODEG00000010262	CHD5	99	94.703	Octodon_degus
ENSMOCG00000011049	Chd5	93	77.838	ENSONIG00000000619	chd5	93	78.287	Oreochromis_niloticus
ENSMOCG00000011049	Chd5	96	72.780	ENSOANG00000001819	CHD5	98	72.622	Ornithorhynchus_anatinus
ENSMOCG00000011049	Chd5	99	93.292	ENSOGAG00000005703	CHD5	99	93.292	Otolemur_garnettii
ENSMOCG00000011049	Chd5	99	93.416	ENSOARG00000013425	CHD5	99	93.558	Ovis_aries
ENSMOCG00000011049	Chd5	99	94.554	ENSPPAG00000034048	CHD5	99	94.707	Pan_paniscus
ENSMOCG00000011049	Chd5	100	94.115	ENSPPRG00000009453	CHD5	100	93.961	Panthera_pardus
ENSMOCG00000011049	Chd5	99	86.673	ENSPTIG00000013926	CHD5	99	86.704	Panthera_tigris_altaica
ENSMOCG00000011049	Chd5	100	94.527	ENSPTRG00000000075	CHD5	100	94.680	Pan_troglodytes
ENSMOCG00000011049	Chd5	100	94.933	ENSPANG00000006765	CHD5	100	95.087	Papio_anubis
ENSMOCG00000011049	Chd5	94	78.896	ENSPKIG00000004282	chd5	98	78.368	Paramormyrops_kingsleyae
ENSMOCG00000011049	Chd5	94	82.375	ENSPSIG00000006414	CHD5	100	82.063	Pelodiscus_sinensis
ENSMOCG00000011049	Chd5	68	98.608	ENSPEMG00000014799	Chd5	100	98.608	Peromyscus_maniculatus_bairdii
ENSMOCG00000011049	Chd5	99	91.323	ENSPCIG00000028310	CHD5	100	89.214	Phascolarctos_cinereus
ENSMOCG00000011049	Chd5	95	76.940	ENSPLAG00000005343	chd5	99	75.490	Poecilia_latipinna
ENSMOCG00000011049	Chd5	99	91.368	ENSPPYG00000001952	CHD5	99	92.372	Pongo_abelii
ENSMOCG00000011049	Chd5	100	94.319	ENSPCOG00000022930	CHD5	100	95.087	Propithecus_coquereli
ENSMOCG00000011049	Chd5	96	77.217	ENSPNYG00000003183	chd5	98	78.060	Pundamilia_nyererei
ENSMOCG00000011049	Chd5	100	97.587	ENSRNOG00000011268	Chd5	100	97.587	Rattus_norvegicus
ENSMOCG00000011049	Chd5	94	96.606	ENSRBIG00000032140	CHD5	95	96.606	Rhinopithecus_bieti
ENSMOCG00000011049	Chd5	99	94.811	ENSRROG00000041146	CHD5	99	94.964	Rhinopithecus_roxellana
ENSMOCG00000011049	Chd5	99	89.468	ENSSBOG00000001955	CHD5	100	95.074	Saimiri_boliviensis_boliviensis
ENSMOCG00000011049	Chd5	96	85.692	ENSSHAG00000018641	CHD5	99	85.722	Sarcophilus_harrisii
ENSMOCG00000011049	Chd5	89	88.412	ENSSFOG00015006296	chd5	90	92.093	Scleropages_formosus
ENSMOCG00000011049	Chd5	89	83.665	ENSSDUG00000017526	chd5	92	90.367	Seriola_dumerili
ENSMOCG00000011049	Chd5	96	81.921	ENSSPUG00000010622	CHD5	99	79.937	Sphenodon_punctatus
ENSMOCG00000011049	Chd5	100	94.874	ENSSSCG00000003366	CHD5	100	95.707	Sus_scrofa
ENSMOCG00000011049	Chd5	93	82.039	ENSTGUG00000002634	-	100	84.087	Taeniopygia_guttata
ENSMOCG00000011049	Chd5	53	80.509	ENSTNIG00000004346	chd5	99	80.747	Tetraodon_nigroviridis
ENSMOCG00000011049	Chd5	100	93.198	ENSTTRG00000010468	CHD5	100	93.510	Tursiops_truncatus
ENSMOCG00000011049	Chd5	98	95.027	ENSUAMG00000024509	CHD5	98	94.557	Ursus_americanus
ENSMOCG00000011049	Chd5	98	89.838	ENSUMAG00000024173	CHD5	98	89.899	Ursus_maritimus
ENSMOCG00000011049	Chd5	99	93.070	ENSVVUG00000026480	CHD5	96	97.561	Vulpes_vulpes
ENSMOCG00000011049	Chd5	96	80.502	ENSXETG00000002904	chd5	99	79.788	Xenopus_tropicalis
ENSMOCG00000011049	Chd5	59	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus