EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000011189 (Gene tree)
Gene ID: 101989090
Gene Symbol: Trnau1ap
Alias: 1110007F05Rik|SECp43|Trspap1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 18646 bases
Position: chr10:52502829-52521474
Accession: 101989090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000010944	RRM_1	PF00076.22	2.1e-27	1	2
ENSMOCP00000010944	RRM_1	PF00076.22	2.1e-27	2	2
ENSMOCP00000010946	RRM_1	PF00076.22	9.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000014365	-	1047	XM_005353129	ENSMOCP00000010944	287 (aa)	XP_005353186	UPI00038C3DA9
ENSMOCT00000014368	-	744	-	ENSMOCP00000010946	247 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000011189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000011189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000011189	Trnau1ap	79	30.198	ENSMOCG00000018898	-	69	31.285
ENSMOCG00000011189	Trnau1ap	54	30.882	ENSMOCG00000007551	Pabpc4l	66	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSG00000180098	TRNAU1AP	100	98.955	Homo_sapiens
ENSMOCG00000011189	Trnau1ap	98	58.416	ENSAPOG00000007148	TRNAU1AP	98	58.416	Acanthochromis_polyacanthus
ENSMOCG00000011189	Trnau1ap	100	97.909	ENSAMEG00000011367	TRNAU1AP	100	97.909	Ailuropoda_melanoleuca
ENSMOCG00000011189	Trnau1ap	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSMOCG00000011189	Trnau1ap	98	58.416	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSMOCG00000011189	Trnau1ap	98	58.416	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSMOCG00000011189	Trnau1ap	98	58.199	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSMOCG00000011189	Trnau1ap	94	93.704	ENSAPLG00000002606	TRNAU1AP	99	93.704	Anas_platyrhynchos
ENSMOCG00000011189	Trnau1ap	99	76.224	ENSACAG00000003995	-	99	76.224	Anolis_carolinensis
ENSMOCG00000011189	Trnau1ap	67	51.813	ENSACAG00000004205	-	74	51.813	Anolis_carolinensis
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSANAG00000018976	TRNAU1AP	100	98.955	Aotus_nancymaae
ENSMOCG00000011189	Trnau1ap	98	59.000	ENSACLG00000018515	trnau1apa	98	60.403	Astatotilapia_calliptera
ENSMOCG00000011189	Trnau1ap	95	65.556	ENSAMXG00000029240	-	98	65.556	Astyanax_mexicanus
ENSMOCG00000011189	Trnau1ap	95	57.762	ENSAMXG00000013750	trnau1apa	90	57.762	Astyanax_mexicanus
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSBTAG00000010393	TRNAU1AP	100	98.606	Bos_taurus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSCJAG00000009717	TRNAU1AP	100	98.955	Callithrix_jacchus
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSCAFG00000011735	TRNAU1AP	100	98.606	Canis_familiaris
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSCAFG00020023584	TRNAU1AP	100	98.606	Canis_lupus_dingo
ENSMOCG00000011189	Trnau1ap	100	98.785	ENSCHIG00000023215	TRNAU1AP	100	98.785	Capra_hircus
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSTSYG00000003506	TRNAU1AP	100	98.606	Carlito_syrichta
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSCPOG00000001925	TRNAU1AP	100	98.606	Cavia_porcellus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSCCAG00000037506	TRNAU1AP	100	98.955	Cebus_capucinus
ENSMOCG00000011189	Trnau1ap	100	98.785	ENSCATG00000044617	TRNAU1AP	100	98.785	Cercocebus_atys
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSCLAG00000008223	TRNAU1AP	100	98.606	Chinchilla_lanigera
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSCSAG00000001014	TRNAU1AP	100	98.606	Chlorocebus_sabaeus
ENSMOCG00000011189	Trnau1ap	95	94.526	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSMOCG00000011189	Trnau1ap	99	44.681	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSMOCG00000011189	Trnau1ap	100	87.108	ENSCANG00000041949	TRNAU1AP	100	98.305	Colobus_angolensis_palliatus
ENSMOCG00000011189	Trnau1ap	100	99.652	ENSCGRG00001004713	Trnau1ap	100	99.652	Cricetulus_griseus_chok1gshd
ENSMOCG00000011189	Trnau1ap	100	99.652	ENSCGRG00000014532	Trnau1ap	100	99.652	Cricetulus_griseus_crigri
ENSMOCG00000011189	Trnau1ap	98	58.333	ENSCSEG00000006663	trnau1apa	94	58.607	Cynoglossus_semilaevis
ENSMOCG00000011189	Trnau1ap	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSMOCG00000011189	Trnau1ap	95	53.571	ENSDARG00000101323	trnau1apa	88	51.957	Danio_rerio
ENSMOCG00000011189	Trnau1ap	67	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSMOCG00000011189	Trnau1ap	100	99.303	ENSDNOG00000033009	TRNAU1AP	100	99.303	Dasypus_novemcinctus
ENSMOCG00000011189	Trnau1ap	99	91.608	ENSDORG00000006349	Trnau1ap	100	100.000	Dipodomys_ordii
ENSMOCG00000011189	Trnau1ap	96	51.493	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSMOCG00000011189	Trnau1ap	85	93.878	ENSETEG00000012594	TRNAU1AP	100	93.878	Echinops_telfairi
ENSMOCG00000011189	Trnau1ap	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSEASG00005010062	TRNAU1AP	100	98.955	Equus_asinus_asinus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSECAG00000012980	TRNAU1AP	100	98.955	Equus_caballus
ENSMOCG00000011189	Trnau1ap	96	70.526	ENSELUG00000022790	-	94	53.390	Esox_lucius
ENSMOCG00000011189	Trnau1ap	96	63.066	ENSELUG00000017686	trnau1apa	94	62.718	Esox_lucius
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSFCAG00000013401	TRNAU1AP	100	98.955	Felis_catus
ENSMOCG00000011189	Trnau1ap	95	94.526	ENSFALG00000001371	TRNAU1AP	100	94.526	Ficedula_albicollis
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSFDAG00000018599	TRNAU1AP	100	98.606	Fukomys_damarensis
ENSMOCG00000011189	Trnau1ap	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSMOCG00000011189	Trnau1ap	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSMOCG00000011189	Trnau1ap	68	49.296	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSMOCG00000011189	Trnau1ap	100	93.728	ENSGALG00000001310	-	100	93.728	Gallus_gallus
ENSMOCG00000011189	Trnau1ap	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSMOCG00000011189	Trnau1ap	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSMOCG00000011189	Trnau1ap	95	94.891	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSGGOG00000003511	TRNAU1AP	100	98.955	Gorilla_gorilla
ENSMOCG00000011189	Trnau1ap	98	58.033	ENSHBUG00000002510	trnau1apa	98	59.406	Haplochromis_burtoni
ENSMOCG00000011189	Trnau1ap	100	98.258	ENSHGLG00000010380	TRNAU1AP	100	98.258	Heterocephalus_glaber_female
ENSMOCG00000011189	Trnau1ap	100	95.819	ENSHGLG00100012699	TRNAU1AP	100	95.819	Heterocephalus_glaber_male
ENSMOCG00000011189	Trnau1ap	99	57.096	ENSHCOG00000014770	trnau1apa	97	66.429	Hippocampus_comes
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSSTOG00000000079	TRNAU1AP	100	98.955	Ictidomys_tridecemlineatus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSJJAG00000010128	Trnau1ap	100	98.955	Jaculus_jaculus
ENSMOCG00000011189	Trnau1ap	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSMOCG00000011189	Trnau1ap	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSMOCG00000011189	Trnau1ap	99	72.632	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSMOCG00000011189	Trnau1ap	99	72.028	ENSLOCG00000004041	trnau1apa	99	70.979	Lepisosteus_oculatus
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSLAFG00000007628	TRNAU1AP	100	98.606	Loxodonta_africana
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSMFAG00000043751	TRNAU1AP	100	98.606	Macaca_fascicularis
ENSMOCG00000011189	Trnau1ap	100	98.785	ENSMMUG00000006561	TRNAU1AP	100	98.785	Macaca_mulatta
ENSMOCG00000011189	Trnau1ap	100	98.785	ENSMNEG00000044201	TRNAU1AP	100	98.785	Macaca_nemestrina
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSMLEG00000015649	TRNAU1AP	100	98.606	Mandrillus_leucophaeus
ENSMOCG00000011189	Trnau1ap	98	58.958	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSMOCG00000011189	Trnau1ap	98	59.000	ENSMZEG00005017722	trnau1apa	98	60.403	Maylandia_zebra
ENSMOCG00000011189	Trnau1ap	97	93.525	ENSMGAG00000002105	TRNAU1AP	100	93.525	Meleagris_gallopavo
ENSMOCG00000011189	Trnau1ap	100	99.303	ENSMICG00000008386	TRNAU1AP	100	99.303	Microcebus_murinus
ENSMOCG00000011189	Trnau1ap	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSMOCG00000011189	Trnau1ap	100	95.470	ENSMODG00000010927	TRNAU1AP	100	95.470	Monodelphis_domestica
ENSMOCG00000011189	Trnau1ap	96	61.092	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSMOCG00000011189	Trnau1ap	100	98.785	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSMOCG00000011189	Trnau1ap	100	98.785	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSMOCG00000011189	Trnau1ap	100	99.190	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSMOCG00000011189	Trnau1ap	100	99.190	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSMPUG00000015511	TRNAU1AP	100	98.606	Mustela_putorius_furo
ENSMOCG00000011189	Trnau1ap	100	99.303	ENSMLUG00000012586	TRNAU1AP	100	99.303	Myotis_lucifugus
ENSMOCG00000011189	Trnau1ap	100	98.381	ENSNGAG00000015881	Trnau1ap	100	98.381	Nannospalax_galili
ENSMOCG00000011189	Trnau1ap	99	56.997	ENSNBRG00000001758	trnau1apa	98	56.997	Neolamprologus_brichardi
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSNLEG00000009822	TRNAU1AP	100	98.955	Nomascus_leucogenys
ENSMOCG00000011189	Trnau1ap	97	94.245	ENSMEUG00000006117	TRNAU1AP	100	94.245	Notamacropus_eugenii
ENSMOCG00000011189	Trnau1ap	82	97.273	ENSOPRG00000007084	-	69	97.273	Ochotona_princeps
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSODEG00000002970	TRNAU1AP	100	98.955	Octodon_degus
ENSMOCG00000011189	Trnau1ap	80	59.671	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSMOCG00000011189	Trnau1ap	99	74.825	ENSOANG00000005325	-	99	74.825	Ornithorhynchus_anatinus
ENSMOCG00000011189	Trnau1ap	100	76.736	ENSOCUG00000002353	-	100	76.736	Oryctolagus_cuniculus
ENSMOCG00000011189	Trnau1ap	89	76.953	ENSOCUG00000006834	-	100	75.000	Oryctolagus_cuniculus
ENSMOCG00000011189	Trnau1ap	100	96.864	ENSOCUG00000011704	-	100	96.864	Oryctolagus_cuniculus
ENSMOCG00000011189	Trnau1ap	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSMOCG00000011189	Trnau1ap	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSMOCG00000011189	Trnau1ap	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSMOCG00000011189	Trnau1ap	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSOGAG00000002274	TRNAU1AP	100	98.955	Otolemur_garnettii
ENSMOCG00000011189	Trnau1ap	100	98.606	ENSOARG00000002843	TRNAU1AP	100	98.606	Ovis_aries
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSPPAG00000033927	TRNAU1AP	100	98.955	Pan_paniscus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSPPRG00000004416	TRNAU1AP	100	98.955	Panthera_pardus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSPTIG00000016677	TRNAU1AP	100	98.955	Panthera_tigris_altaica
ENSMOCG00000011189	Trnau1ap	93	80.074	ENSPTRG00000000434	-	97	78.967	Pan_troglodytes
ENSMOCG00000011189	Trnau1ap	100	98.785	ENSPANG00000016019	TRNAU1AP	100	98.785	Papio_anubis
ENSMOCG00000011189	Trnau1ap	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSMOCG00000011189	Trnau1ap	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSMOCG00000011189	Trnau1ap	95	94.891	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSMOCG00000011189	Trnau1ap	94	61.397	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSMOCG00000011189	Trnau1ap	100	99.303	ENSPEMG00000007877	Trnau1ap	100	99.303	Peromyscus_maniculatus_bairdii
ENSMOCG00000011189	Trnau1ap	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSMOCG00000011189	Trnau1ap	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSMOCG00000011189	Trnau1ap	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSMOCG00000011189	Trnau1ap	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSMOCG00000011189	Trnau1ap	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSMOCG00000011189	Trnau1ap	93	53.903	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSMOCG00000011189	Trnau1ap	100	89.879	ENSPPYG00000001639	-	100	89.879	Pongo_abelii
ENSMOCG00000011189	Trnau1ap	98	95.041	ENSPCOG00000023470	-	100	95.041	Propithecus_coquereli
ENSMOCG00000011189	Trnau1ap	100	99.303	ENSPCOG00000027712	-	100	99.303	Propithecus_coquereli
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSPVAG00000017214	TRNAU1AP	100	98.955	Pteropus_vampyrus
ENSMOCG00000011189	Trnau1ap	98	58.033	ENSPNYG00000010130	trnau1apa	98	59.684	Pundamilia_nyererei
ENSMOCG00000011189	Trnau1ap	99	53.356	ENSPNAG00000024905	trnau1apa	95	52.560	Pygocentrus_nattereri
ENSMOCG00000011189	Trnau1ap	94	90.775	ENSRNOG00000055344	Trnau1ap	92	90.775	Rattus_norvegicus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSRBIG00000029083	TRNAU1AP	100	98.955	Rhinopithecus_bieti
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSRROG00000029128	TRNAU1AP	100	98.955	Rhinopithecus_roxellana
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSSBOG00000021299	TRNAU1AP	100	98.955	Saimiri_boliviensis_boliviensis
ENSMOCG00000011189	Trnau1ap	100	94.774	ENSSHAG00000008108	TRNAU1AP	100	94.774	Sarcophilus_harrisii
ENSMOCG00000011189	Trnau1ap	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSMOCG00000011189	Trnau1ap	85	71.111	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSMOCG00000011189	Trnau1ap	95	60.851	ENSSLDG00000012101	trnau1apa	92	60.851	Seriola_lalandi_dorsalis
ENSMOCG00000011189	Trnau1ap	97	97.842	ENSSARG00000007536	TRNAU1AP	100	97.842	Sorex_araneus
ENSMOCG00000011189	Trnau1ap	99	85.664	ENSSPUG00000010400	-	100	85.664	Sphenodon_punctatus
ENSMOCG00000011189	Trnau1ap	61	81.250	ENSSPUG00000010415	-	100	81.250	Sphenodon_punctatus
ENSMOCG00000011189	Trnau1ap	98	57.980	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSMOCG00000011189	Trnau1ap	100	98.955	ENSSSCG00000030284	TRNAU1AP	100	98.955	Sus_scrofa
ENSMOCG00000011189	Trnau1ap	97	94.964	ENSTGUG00000000735	-	100	94.964	Taeniopygia_guttata
ENSMOCG00000011189	Trnau1ap	68	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSMOCG00000011189	Trnau1ap	98	58.804	ENSTRUG00000003352	trnau1apa	98	71.852	Takifugu_rubripes
ENSMOCG00000011189	Trnau1ap	99	56.536	ENSTNIG00000006129	trnau1apa	99	56.536	Tetraodon_nigroviridis
ENSMOCG00000011189	Trnau1ap	85	86.939	ENSTBEG00000008049	-	100	86.939	Tupaia_belangeri
ENSMOCG00000011189	Trnau1ap	100	99.303	ENSTTRG00000001854	TRNAU1AP	100	99.303	Tursiops_truncatus
ENSMOCG00000011189	Trnau1ap	95	98.540	ENSUAMG00000008789	TRNAU1AP	100	98.540	Ursus_americanus
ENSMOCG00000011189	Trnau1ap	100	98.258	ENSUMAG00000011068	TRNAU1AP	100	98.258	Ursus_maritimus
ENSMOCG00000011189	Trnau1ap	100	88.014	ENSVPAG00000006778	TRNAU1AP	100	88.014	Vicugna_pacos
ENSMOCG00000011189	Trnau1ap	99	96.831	ENSVVUG00000012518	TRNAU1AP	93	96.831	Vulpes_vulpes
ENSMOCG00000011189	Trnau1ap	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus