EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000011340 (Gene tree)
Gene ID: 101994301
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type%2C RNA binding motif and serine/arginine rich 2
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 22581 bases
Position: chrX:45601552-45624132
Accession: 101994301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000011101	zf-CCCH	PF00642.24	1.8e-12	1	1
ENSMOCP00000011098	zf-CCCH	PF00642.24	2e-12	1	1
ENSMOCP00000011100	zf-CCCH	PF00642.24	2.1e-12	1	1
ENSMOCP00000011104	zf-CCCH	PF00642.24	2.2e-12	1	1
ENSMOCP00000011101	RRM_1	PF00076.22	3.3e-05	1	1
ENSMOCP00000011098	RRM_1	PF00076.22	3.6e-05	1	1
ENSMOCP00000011100	RRM_1	PF00076.22	3.7e-05	1	1
ENSMOCP00000011104	RRM_1	PF00076.22	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000014569	-	1703	XM_005358764	ENSMOCP00000011100	487 (aa)	XP_005358821	UPI00038C04A4
ENSMOCT00000014570	-	1374	-	ENSMOCP00000011101	457 (aa)	-	-
ENSMOCT00000014565	-	1449	-	ENSMOCP00000011098	482 (aa)	-	-
ENSMOCT00000014573	-	1503	-	ENSMOCP00000011104	500 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000011340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000011340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000011340	-	91	83.254	ENSG00000169249	ZRSR2	100	80.328	Homo_sapiens
ENSMOCG00000011340	-	67	61.682	ENSAPOG00000004712	zrsr2	81	61.972	Acanthochromis_polyacanthus
ENSMOCG00000011340	-	90	82.169	ENSAMEG00000017716	ZRSR2	99	77.137	Ailuropoda_melanoleuca
ENSMOCG00000011340	-	79	58.133	ENSACIG00000004601	zrsr2	58	64.138	Amphilophus_citrinellus
ENSMOCG00000011340	-	76	61.972	ENSAOCG00000024102	zrsr2	71	56.561	Amphiprion_ocellaris
ENSMOCG00000011340	-	76	64.205	ENSAPEG00000024673	zrsr2	71	56.916	Amphiprion_percula
ENSMOCG00000011340	-	77	63.202	ENSATEG00000016753	zrsr2	72	55.730	Anabas_testudineus
ENSMOCG00000011340	-	93	70.000	ENSACAG00000017034	ZRSR2	92	70.091	Anolis_carolinensis
ENSMOCG00000011340	-	90	83.942	ENSANAG00000019297	ZRSR2	100	79.303	Aotus_nancymaae
ENSMOCG00000011340	-	81	61.376	ENSACLG00000019635	zrsr2	70	59.682	Astatotilapia_calliptera
ENSMOCG00000011340	-	85	59.524	ENSAMXG00000018502	zrsr2	59	61.930	Astyanax_mexicanus
ENSMOCG00000011340	-	90	84.185	ENSCJAG00000047941	ZRSR2	100	79.303	Callithrix_jacchus
ENSMOCG00000011340	-	98	77.215	ENSCAFG00000012201	ZRSR2	100	75.365	Canis_familiaris
ENSMOCG00000011340	-	76	67.714	ENSCAFG00020016674	-	100	54.617	Canis_lupus_dingo
ENSMOCG00000011340	-	89	75.490	ENSCHIG00000024109	-	94	74.510	Capra_hircus
ENSMOCG00000011340	-	77	80.282	ENSCHIG00000023069	-	96	79.019	Capra_hircus
ENSMOCG00000011340	-	53	79.447	ENSTSYG00000005278	-	83	78.148	Carlito_syrichta
ENSMOCG00000011340	-	96	76.082	ENSCPOG00000004227	ZRSR2	94	79.904	Cavia_porcellus
ENSMOCG00000011340	-	90	84.185	ENSCCAG00000023937	ZRSR2	100	79.508	Cebus_capucinus
ENSMOCG00000011340	-	91	83.254	ENSCATG00000034085	ZRSR2	100	80.123	Cercocebus_atys
ENSMOCG00000011340	-	95	76.765	ENSCATG00000020687	-	89	77.982	Cercocebus_atys
ENSMOCG00000011340	-	75	85.217	ENSCLAG00000002087	ZRSR2	99	83.978	Chinchilla_lanigera
ENSMOCG00000011340	-	91	82.857	ENSCSAG00000014897	ZRSR2	100	79.388	Chlorocebus_sabaeus
ENSMOCG00000011340	-	74	71.176	ENSCHOG00000007907	ZRSR2	90	59.905	Choloepus_hoffmanni
ENSMOCG00000011340	-	94	76.923	ENSCANG00000030333	ZRSR2	100	74.590	Colobus_angolensis_palliatus
ENSMOCG00000011340	-	92	72.857	ENSCGRG00001007132	Zrsr1	98	71.429	Cricetulus_griseus_chok1gshd
ENSMOCG00000011340	-	100	86.381	ENSCGRG00001006948	-	100	85.992	Cricetulus_griseus_chok1gshd
ENSMOCG00000011340	-	92	72.857	ENSCGRG00000019269	Zrsr1	98	71.429	Cricetulus_griseus_crigri
ENSMOCG00000011340	-	100	89.206	ENSCGRG00000009725	-	100	89.206	Cricetulus_griseus_crigri
ENSMOCG00000011340	-	86	62.147	ENSCSEG00000009682	zrsr2	62	65.789	Cynoglossus_semilaevis
ENSMOCG00000011340	-	74	64.706	ENSCVAG00000020877	zrsr2	69	57.398	Cyprinodon_variegatus
ENSMOCG00000011340	-	76	66.857	ENSDARG00000058448	zrsr2	54	66.189	Danio_rerio
ENSMOCG00000011340	-	86	82.576	ENSDNOG00000015008	ZRSR2	83	85.034	Dasypus_novemcinctus
ENSMOCG00000011340	-	62	35.739	FBgn0031628	CG3294	59	30.112	Drosophila_melanogaster
ENSMOCG00000011340	-	97	66.167	ENSETEG00000005141	-	100	65.227	Echinops_telfairi
ENSMOCG00000011340	-	54	86.345	ENSECAG00000006454	ZRSR2	100	78.086	Equus_caballus
ENSMOCG00000011340	-	100	75.051	ENSEEUG00000002115	ZRSR2	91	78.704	Erinaceus_europaeus
ENSMOCG00000011340	-	100	79.614	ENSFCAG00000009333	-	100	78.326	Felis_catus
ENSMOCG00000011340	-	90	78.019	ENSFCAG00000025255	-	88	76.212	Felis_catus
ENSMOCG00000011340	-	86	71.679	ENSFALG00000004373	ZRSR2	91	70.481	Ficedula_albicollis
ENSMOCG00000011340	-	90	82.082	ENSFDAG00000011766	ZRSR2	89	81.221	Fukomys_damarensis
ENSMOCG00000011340	-	77	65.254	ENSFHEG00000006093	zrsr2	76	56.893	Fundulus_heteroclitus
ENSMOCG00000011340	-	61	58.537	ENSGMOG00000008189	zrsr2	73	50.802	Gadus_morhua
ENSMOCG00000011340	-	56	77.519	ENSGALG00000016552	ZRSR2	86	73.973	Gallus_gallus
ENSMOCG00000011340	-	78	58.158	ENSGACG00000015069	zrsr2	64	56.831	Gasterosteus_aculeatus
ENSMOCG00000011340	-	83	71.728	ENSGAGG00000016402	ZRSR2	89	67.453	Gopherus_agassizii
ENSMOCG00000011340	-	90	56.115	ENSGGOG00000025707	-	96	54.197	Gorilla_gorilla
ENSMOCG00000011340	-	91	83.254	ENSGGOG00000011962	ZRSR2	100	79.508	Gorilla_gorilla
ENSMOCG00000011340	-	84	61.772	ENSHBUG00000000797	zrsr2	76	56.948	Haplochromis_burtoni
ENSMOCG00000011340	-	90	82.082	ENSHGLG00000003790	ZRSR2	91	81.368	Heterocephalus_glaber_female
ENSMOCG00000011340	-	89	82.801	ENSHGLG00100010131	ZRSR2	90	81.368	Heterocephalus_glaber_male
ENSMOCG00000011340	-	70	61.728	ENSHCOG00000020661	zrsr2	51	65.018	Hippocampus_comes
ENSMOCG00000011340	-	85	57.216	ENSIPUG00000012642	zrsr2	88	58.739	Ictalurus_punctatus
ENSMOCG00000011340	-	94	78.571	ENSSTOG00000008492	ZRSR2	100	77.919	Ictidomys_tridecemlineatus
ENSMOCG00000011340	-	90	83.333	ENSJJAG00000020365	-	86	83.810	Jaculus_jaculus
ENSMOCG00000011340	-	77	64.225	ENSKMAG00000009969	zrsr2	74	57.208	Kryptolebias_marmoratus
ENSMOCG00000011340	-	62	68.182	ENSLBEG00000024627	zrsr2	69	59.140	Labrus_bergylta
ENSMOCG00000011340	-	83	68.586	ENSLACG00000013483	ZRSR2	68	66.033	Latimeria_chalumnae
ENSMOCG00000011340	-	84	66.062	ENSLOCG00000007427	zrsr2	82	61.851	Lepisosteus_oculatus
ENSMOCG00000011340	-	87	78.000	ENSLAFG00000009326	-	92	77.670	Loxodonta_africana
ENSMOCG00000011340	-	90	66.908	ENSLAFG00000018654	-	96	65.734	Loxodonta_africana
ENSMOCG00000011340	-	94	82.284	ENSMFAG00000039674	ZRSR2	100	79.713	Macaca_fascicularis
ENSMOCG00000011340	-	94	82.284	ENSMNEG00000043293	ZRSR2	100	79.713	Macaca_nemestrina
ENSMOCG00000011340	-	91	78.947	ENSMLEG00000028125	ZRSR2	100	76.230	Mandrillus_leucophaeus
ENSMOCG00000011340	-	84	61.929	ENSMAMG00000010779	zrsr2	58	63.333	Mastacembelus_armatus
ENSMOCG00000011340	-	84	61.519	ENSMZEG00005006531	zrsr2	76	56.502	Maylandia_zebra
ENSMOCG00000011340	-	85	72.222	ENSMGAG00000014689	ZRSR2	90	70.000	Meleagris_gallopavo
ENSMOCG00000011340	-	100	87.426	ENSMAUG00000009754	-	100	87.230	Mesocricetus_auratus
ENSMOCG00000011340	-	90	83.293	ENSMICG00000003211	ZRSR2	100	82.641	Microcebus_murinus
ENSMOCG00000011340	-	76	59.040	ENSMMOG00000018572	zrsr2	66	63.390	Mola_mola
ENSMOCG00000011340	-	86	72.431	ENSMODG00000017202	ZRSR2	92	70.115	Monodelphis_domestica
ENSMOCG00000011340	-	86	52.133	ENSMALG00000013132	zrsr2	67	54.331	Monopterus_albus
ENSMOCG00000011340	-	91	74.879	MGP_CAROLIEiJ_G0016133	Zrsr1	97	73.832	Mus_caroli
ENSMOCG00000011340	-	91	76.202	ENSMUSG00000044068	Zrsr1	97	74.126	Mus_musculus
ENSMOCG00000011340	-	91	76.087	MGP_PahariEiJ_G0016759	Zrsr1	97	74.766	Mus_pahari
ENSMOCG00000011340	-	91	76.202	MGP_SPRETEiJ_G0016976	Zrsr1	97	74.126	Mus_spretus
ENSMOCG00000011340	-	90	81.114	ENSMPUG00000002739	ZRSR2	100	75.966	Mustela_putorius_furo
ENSMOCG00000011340	-	98	76.632	ENSMLUG00000009780	-	99	74.898	Myotis_lucifugus
ENSMOCG00000011340	-	77	53.977	ENSMLUG00000002201	-	77	55.372	Myotis_lucifugus
ENSMOCG00000011340	-	83	74.016	ENSNGAG00000011974	Zrsr1	98	72.386	Nannospalax_galili
ENSMOCG00000011340	-	93	83.645	ENSNGAG00000008809	-	91	83.410	Nannospalax_galili
ENSMOCG00000011340	-	74	64.035	ENSNBRG00000021146	zrsr2	70	60.053	Neolamprologus_brichardi
ENSMOCG00000011340	-	100	79.503	ENSNLEG00000009496	ZRSR2	100	79.303	Nomascus_leucogenys
ENSMOCG00000011340	-	100	77.273	ENSNLEG00000018892	-	100	74.899	Nomascus_leucogenys
ENSMOCG00000011340	-	67	70.874	ENSMEUG00000015318	-	65	70.874	Notamacropus_eugenii
ENSMOCG00000011340	-	94	80.420	ENSODEG00000004944	ZRSR2	91	78.995	Octodon_degus
ENSMOCG00000011340	-	74	65.896	ENSONIG00000000228	zrsr2	77	62.670	Oreochromis_niloticus
ENSMOCG00000011340	-	89	73.659	ENSOANG00000002571	ZRSR2	92	70.968	Ornithorhynchus_anatinus
ENSMOCG00000011340	-	94	80.324	ENSOCUG00000004295	ZRSR2	88	78.490	Oryctolagus_cuniculus
ENSMOCG00000011340	-	76	61.429	ENSORLG00000003476	zrsr2	74	55.882	Oryzias_latipes
ENSMOCG00000011340	-	69	63.438	ENSORLG00020020707	zrsr2	64	59.151	Oryzias_latipes_hni
ENSMOCG00000011340	-	75	61.782	ENSORLG00015019831	zrsr2	74	55.656	Oryzias_latipes_hsok
ENSMOCG00000011340	-	62	68.531	ENSOMEG00000011857	zrsr2	67	60.422	Oryzias_melastigma
ENSMOCG00000011340	-	94	82.135	ENSOGAG00000011340	-	98	81.336	Otolemur_garnettii
ENSMOCG00000011340	-	91	80.576	ENSOGAG00000033259	-	99	76.749	Otolemur_garnettii
ENSMOCG00000011340	-	86	76.962	ENSOGAG00000031648	-	87	72.960	Otolemur_garnettii
ENSMOCG00000011340	-	90	81.775	ENSOARG00000012713	ZRSR2	94	79.727	Ovis_aries
ENSMOCG00000011340	-	91	83.493	ENSPPAG00000022429	ZRSR2	100	79.713	Pan_paniscus
ENSMOCG00000011340	-	95	79.727	ENSPPAG00000008683	-	100	75.311	Pan_paniscus
ENSMOCG00000011340	-	99	74.464	ENSPPRG00000012485	-	99	72.103	Panthera_pardus
ENSMOCG00000011340	-	100	77.254	ENSPPRG00000016585	-	100	77.897	Panthera_pardus
ENSMOCG00000011340	-	99	74.249	ENSPTIG00000006398	-	99	71.888	Panthera_tigris_altaica
ENSMOCG00000011340	-	98	78.481	ENSPTIG00000016363	-	97	79.204	Panthera_tigris_altaica
ENSMOCG00000011340	-	81	64.690	ENSPTRG00000045685	-	100	57.860	Pan_troglodytes
ENSMOCG00000011340	-	91	83.493	ENSPTRG00000021693	ZRSR2	100	79.713	Pan_troglodytes
ENSMOCG00000011340	-	95	79.727	ENSPTRG00000017138	-	100	75.311	Pan_troglodytes
ENSMOCG00000011340	-	91	83.254	ENSPANG00000016331	ZRSR2	100	79.918	Papio_anubis
ENSMOCG00000011340	-	95	78.864	ENSPANG00000009346	-	89	78.719	Papio_anubis
ENSMOCG00000011340	-	81	62.973	ENSPKIG00000013433	zrsr2	68	56.368	Paramormyrops_kingsleyae
ENSMOCG00000011340	-	85	75.773	ENSPSIG00000008915	ZRSR2	98	67.452	Pelodiscus_sinensis
ENSMOCG00000011340	-	71	61.162	ENSPMGG00000000771	zrsr2	54	66.071	Periophthalmus_magnuspinnatus
ENSMOCG00000011340	-	92	74.584	ENSPEMG00000013373	Zrsr1	98	73.963	Peromyscus_maniculatus_bairdii
ENSMOCG00000011340	-	93	50.331	ENSPMAG00000008152	zrsr2	78	51.064	Petromyzon_marinus
ENSMOCG00000011340	-	51	84.255	ENSPCIG00000000346	ZRSR2	99	73.090	Phascolarctos_cinereus
ENSMOCG00000011340	-	77	64.124	ENSPLAG00000019869	zrsr2	74	56.167	Poecilia_latipinna
ENSMOCG00000011340	-	77	64.124	ENSPMEG00000024070	zrsr2	75	56.167	Poecilia_mexicana
ENSMOCG00000011340	-	62	67.247	ENSPREG00000019201	zrsr2	76	50.227	Poecilia_reticulata
ENSMOCG00000011340	-	91	83.254	ENSPPYG00000020150	ZRSR2	100	79.508	Pongo_abelii
ENSMOCG00000011340	-	90	83.535	ENSPCOG00000027178	ZRSR2	100	80.533	Propithecus_coquereli
ENSMOCG00000011340	-	89	75.845	ENSPVAG00000010216	ZRSR2	93	73.973	Pteropus_vampyrus
ENSMOCG00000011340	-	81	61.905	ENSPNYG00000018426	zrsr2	70	60.270	Pundamilia_nyererei
ENSMOCG00000011340	-	68	69.132	ENSPNAG00000012282	zrsr2	64	66.097	Pygocentrus_nattereri
ENSMOCG00000011340	-	91	73.913	ENSRNOG00000009639	Zrsr1	97	72.430	Rattus_norvegicus
ENSMOCG00000011340	-	94	68.765	ENSRBIG00000033960	-	100	64.894	Rhinopithecus_bieti
ENSMOCG00000011340	-	96	63.063	ENSRBIG00000035472	ZRSR2	100	63.730	Rhinopithecus_bieti
ENSMOCG00000011340	-	96	80.682	ENSRROG00000030588	ZRSR2	100	79.508	Rhinopithecus_roxellana
ENSMOCG00000011340	-	94	71.329	ENSRROG00000041659	-	95	70.507	Rhinopithecus_roxellana
ENSMOCG00000011340	-	87	70.175	ENSSBOG00000017836	ZRSR2	99	67.081	Saimiri_boliviensis_boliviensis
ENSMOCG00000011340	-	86	77.387	ENSSHAG00000013271	ZRSR2	98	71.613	Sarcophilus_harrisii
ENSMOCG00000011340	-	83	61.198	ENSSFOG00015009363	zrsr2	51	59.003	Scleropages_formosus
ENSMOCG00000011340	-	80	60.367	ENSSMAG00000013874	zrsr2	60	60.938	Scophthalmus_maximus
ENSMOCG00000011340	-	77	62.674	ENSSDUG00000002784	zrsr2	73	53.664	Seriola_dumerili
ENSMOCG00000011340	-	83	70.419	ENSSPUG00000007432	ZRSR2	84	71.625	Sphenodon_punctatus
ENSMOCG00000011340	-	61	67.606	ENSSPAG00000010595	zrsr2	61	56.183	Stegastes_partitus
ENSMOCG00000011340	-	90	77.512	ENSSSCG00000030283	-	100	71.518	Sus_scrofa
ENSMOCG00000011340	-	59	73.063	ENSSSCG00000026864	-	99	69.373	Sus_scrofa
ENSMOCG00000011340	-	82	73.368	ENSTGUG00000007964	ZRSR2	90	71.875	Taeniopygia_guttata
ENSMOCG00000011340	-	71	85.890	ENSTBEG00000008533	ZRSR2	69	85.890	Tupaia_belangeri
ENSMOCG00000011340	-	54	87.550	ENSUAMG00000016637	ZRSR2	100	81.457	Ursus_americanus
ENSMOCG00000011340	-	54	87.550	ENSUMAG00000008698	ZRSR2	100	81.457	Ursus_maritimus
ENSMOCG00000011340	-	81	83.110	ENSVPAG00000007641	ZRSR2	93	78.348	Vicugna_pacos
ENSMOCG00000011340	-	76	67.622	ENSVVUG00000009615	-	76	65.797	Vulpes_vulpes
ENSMOCG00000011340	-	87	65.152	ENSXETG00000031542	ZRSR2	93	61.468	Xenopus_tropicalis
ENSMOCG00000011340	-	59	67.361	ENSXCOG00000000318	zrsr2	65	56.417	Xiphophorus_couchianus
ENSMOCG00000011340	-	71	59.003	ENSXMAG00000015258	zrsr2	59	54.337	Xiphophorus_maculatus