EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000011739 (Gene tree)
Gene ID: 101979441
Gene Symbol: Sbds
Alias: 4733401P19Rik|Shwachman-Bodian-Diamond syndrome homolog (human)
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 9054 bases
Position: chr2:27350147-27359200
Accession: 101979441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000011482	SBDS	PF01172.18	6e-33	1	1
ENSMOCP00000011482	SBDS_C	PF09377.10	3.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000015074	-	1492	XM_005344676	ENSMOCP00000011482	250 (aa)	XP_005344733	UPI00038C4020

Gene Model

Click here to download ENSMOCG00000011739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000011739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000011739	Sbds	100	97.600	ENSG00000126524	SBDS	100	97.600	Homo_sapiens
ENSMOCG00000011739	Sbds	99	83.534	ENSAPOG00000014285	sbds	100	83.534	Acanthochromis_polyacanthus
ENSMOCG00000011739	Sbds	100	97.200	ENSAMEG00000018167	SBDS	100	97.200	Ailuropoda_melanoleuca
ENSMOCG00000011739	Sbds	99	83.333	ENSACIG00000007308	sbds	100	83.333	Amphilophus_citrinellus
ENSMOCG00000011739	Sbds	99	83.534	ENSAOCG00000016770	sbds	100	83.534	Amphiprion_ocellaris
ENSMOCG00000011739	Sbds	99	83.936	ENSAPEG00000015897	sbds	100	83.936	Amphiprion_percula
ENSMOCG00000011739	Sbds	99	83.936	ENSATEG00000006901	sbds	100	83.936	Anabas_testudineus
ENSMOCG00000011739	Sbds	83	96.618	ENSANAG00000037501	-	100	96.618	Aotus_nancymaae
ENSMOCG00000011739	Sbds	92	90.476	ENSANAG00000024342	-	97	90.476	Aotus_nancymaae
ENSMOCG00000011739	Sbds	99	84.739	ENSACLG00000018750	sbds	100	84.739	Astatotilapia_calliptera
ENSMOCG00000011739	Sbds	100	84.800	ENSAMXG00000005361	sbds	100	84.800	Astyanax_mexicanus
ENSMOCG00000011739	Sbds	100	98.000	ENSBTAG00000004051	SBDS	100	98.000	Bos_taurus
ENSMOCG00000011739	Sbds	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSMOCG00000011739	Sbds	100	97.200	ENSCJAG00000041007	SBDS	100	97.200	Callithrix_jacchus
ENSMOCG00000011739	Sbds	100	94.444	ENSCAFG00000010797	SBDS	100	94.444	Canis_familiaris
ENSMOCG00000011739	Sbds	100	96.800	ENSCAFG00020005357	SBDS	100	96.800	Canis_lupus_dingo
ENSMOCG00000011739	Sbds	100	98.000	ENSCHIG00000026854	SBDS	100	98.000	Capra_hircus
ENSMOCG00000011739	Sbds	100	97.600	ENSTSYG00000033822	SBDS	100	97.600	Carlito_syrichta
ENSMOCG00000011739	Sbds	66	97.561	ENSCAPG00000006634	SBDS	100	97.561	Cavia_aperea
ENSMOCG00000011739	Sbds	100	98.400	ENSCPOG00000036143	SBDS	100	98.400	Cavia_porcellus
ENSMOCG00000011739	Sbds	100	97.200	ENSCCAG00000020671	SBDS	100	97.200	Cebus_capucinus
ENSMOCG00000011739	Sbds	100	97.600	ENSCATG00000039026	SBDS	100	97.600	Cercocebus_atys
ENSMOCG00000011739	Sbds	99	71.774	ENSCLAG00000002113	-	99	71.774	Chinchilla_lanigera
ENSMOCG00000011739	Sbds	100	98.000	ENSCLAG00000005721	-	100	98.000	Chinchilla_lanigera
ENSMOCG00000011739	Sbds	100	97.600	ENSCSAG00000018275	SBDS	100	97.600	Chlorocebus_sabaeus
ENSMOCG00000011739	Sbds	100	93.200	ENSCHOG00000003795	SBDS	100	93.200	Choloepus_hoffmanni
ENSMOCG00000011739	Sbds	100	89.200	ENSCPBG00000014893	SBDS	100	89.200	Chrysemys_picta_bellii
ENSMOCG00000011739	Sbds	99	67.600	ENSCSAVG00000011811	-	100	67.600	Ciona_savignyi
ENSMOCG00000011739	Sbds	100	97.200	ENSCANG00000032368	SBDS	100	97.200	Colobus_angolensis_palliatus
ENSMOCG00000011739	Sbds	66	98.780	ENSCGRG00001019886	Sbds	100	98.780	Cricetulus_griseus_chok1gshd
ENSMOCG00000011739	Sbds	83	99.034	ENSCGRG00000009211	Sbds	100	99.034	Cricetulus_griseus_crigri
ENSMOCG00000011739	Sbds	99	81.928	ENSCSEG00000005798	sbds	100	81.928	Cynoglossus_semilaevis
ENSMOCG00000011739	Sbds	99	82.329	ENSCVAG00000001053	sbds	100	82.329	Cyprinodon_variegatus
ENSMOCG00000011739	Sbds	100	84.800	ENSDARG00000027803	sbds	100	84.800	Danio_rerio
ENSMOCG00000011739	Sbds	100	97.200	ENSDNOG00000041174	SBDS	100	97.200	Dasypus_novemcinctus
ENSMOCG00000011739	Sbds	100	97.600	ENSDORG00000026218	Sbds	100	97.600	Dipodomys_ordii
ENSMOCG00000011739	Sbds	90	58.772	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSMOCG00000011739	Sbds	93	58.369	ENSEBUG00000015780	sbds	100	58.369	Eptatretus_burgeri
ENSMOCG00000011739	Sbds	100	98.000	ENSEASG00005008821	SBDS	100	98.000	Equus_asinus_asinus
ENSMOCG00000011739	Sbds	100	98.000	ENSECAG00000008202	SBDS	100	98.000	Equus_caballus
ENSMOCG00000011739	Sbds	83	74.519	ENSEEUG00000004768	SBDS	100	74.519	Erinaceus_europaeus
ENSMOCG00000011739	Sbds	100	82.000	ENSELUG00000008382	sbds	100	82.000	Esox_lucius
ENSMOCG00000011739	Sbds	100	97.600	ENSFCAG00000022142	SBDS	100	97.600	Felis_catus
ENSMOCG00000011739	Sbds	100	89.200	ENSFALG00000013808	SBDS	100	89.200	Ficedula_albicollis
ENSMOCG00000011739	Sbds	100	98.400	ENSFDAG00000018947	-	100	98.400	Fukomys_damarensis
ENSMOCG00000011739	Sbds	99	79.116	ENSFHEG00000000708	sbds	100	79.116	Fundulus_heteroclitus
ENSMOCG00000011739	Sbds	100	83.600	ENSGMOG00000018356	sbds	99	83.600	Gadus_morhua
ENSMOCG00000011739	Sbds	100	88.800	ENSGALG00000027989	SBDS	100	88.800	Gallus_gallus
ENSMOCG00000011739	Sbds	92	79.130	ENSGAFG00000014204	sbds	100	79.130	Gambusia_affinis
ENSMOCG00000011739	Sbds	99	82.731	ENSGACG00000012697	sbds	100	82.731	Gasterosteus_aculeatus
ENSMOCG00000011739	Sbds	86	89.252	ENSGAGG00000022402	SBDS	100	89.252	Gopherus_agassizii
ENSMOCG00000011739	Sbds	96	77.178	ENSGGOG00000040023	-	92	77.178	Gorilla_gorilla
ENSMOCG00000011739	Sbds	99	84.739	ENSHBUG00000002660	sbds	100	84.739	Haplochromis_burtoni
ENSMOCG00000011739	Sbds	100	96.800	ENSHGLG00000009671	SBDS	100	96.800	Heterocephalus_glaber_female
ENSMOCG00000011739	Sbds	100	96.800	ENSHGLG00100011332	SBDS	100	96.800	Heterocephalus_glaber_male
ENSMOCG00000011739	Sbds	99	81.124	ENSHCOG00000018606	sbds	100	81.124	Hippocampus_comes
ENSMOCG00000011739	Sbds	100	86.400	ENSIPUG00000006536	sbds	100	86.400	Ictalurus_punctatus
ENSMOCG00000011739	Sbds	100	69.960	ENSJJAG00000003934	-	100	69.960	Jaculus_jaculus
ENSMOCG00000011739	Sbds	100	94.400	ENSJJAG00000012033	-	100	94.400	Jaculus_jaculus
ENSMOCG00000011739	Sbds	99	83.936	ENSKMAG00000018542	sbds	100	83.936	Kryptolebias_marmoratus
ENSMOCG00000011739	Sbds	99	81.526	ENSLBEG00000016687	sbds	100	81.526	Labrus_bergylta
ENSMOCG00000011739	Sbds	100	70.866	ENSLACG00000018916	SBDS	100	70.866	Latimeria_chalumnae
ENSMOCG00000011739	Sbds	100	86.800	ENSLOCG00000004073	sbds	100	86.800	Lepisosteus_oculatus
ENSMOCG00000011739	Sbds	100	96.000	ENSLAFG00000008763	SBDS	100	96.000	Loxodonta_africana
ENSMOCG00000011739	Sbds	100	97.600	ENSMFAG00000032620	SBDS	100	97.600	Macaca_fascicularis
ENSMOCG00000011739	Sbds	100	97.600	ENSMMUG00000045653	SBDS	100	97.600	Macaca_mulatta
ENSMOCG00000011739	Sbds	100	97.600	ENSMNEG00000031523	SBDS	100	97.600	Macaca_nemestrina
ENSMOCG00000011739	Sbds	100	74.803	ENSMLEG00000036826	SBDS	100	74.803	Mandrillus_leucophaeus
ENSMOCG00000011739	Sbds	99	83.534	ENSMAMG00000016062	sbds	100	83.534	Mastacembelus_armatus
ENSMOCG00000011739	Sbds	99	84.739	ENSMZEG00005024385	sbds	100	84.739	Maylandia_zebra
ENSMOCG00000011739	Sbds	100	88.800	ENSMGAG00000002119	SBDS	100	88.800	Meleagris_gallopavo
ENSMOCG00000011739	Sbds	99	78.715	ENSMAUG00000022214	-	100	78.715	Mesocricetus_auratus
ENSMOCG00000011739	Sbds	100	98.000	ENSMICG00000014366	SBDS	100	98.000	Microcebus_murinus
ENSMOCG00000011739	Sbds	99	73.200	ENSMMOG00000005061	sbds	100	73.200	Mola_mola
ENSMOCG00000011739	Sbds	100	96.000	ENSMODG00000006644	SBDS	100	96.000	Monodelphis_domestica
ENSMOCG00000011739	Sbds	99	83.534	ENSMALG00000010219	sbds	100	83.534	Monopterus_albus
ENSMOCG00000011739	Sbds	100	99.200	MGP_CAROLIEiJ_G0027800	Sbds	100	99.200	Mus_caroli
ENSMOCG00000011739	Sbds	100	98.800	ENSMUSG00000025337	Sbds	100	98.800	Mus_musculus
ENSMOCG00000011739	Sbds	100	98.800	MGP_PahariEiJ_G0024384	Sbds	100	98.800	Mus_pahari
ENSMOCG00000011739	Sbds	100	98.800	MGP_SPRETEiJ_G0028798	Sbds	100	98.800	Mus_spretus
ENSMOCG00000011739	Sbds	67	92.857	ENSMPUG00000016192	SBDS	97	92.857	Mustela_putorius_furo
ENSMOCG00000011739	Sbds	73	94.505	ENSMLUG00000013575	SBDS	100	94.505	Myotis_lucifugus
ENSMOCG00000011739	Sbds	100	99.200	ENSNGAG00000012093	Sbds	100	99.200	Nannospalax_galili
ENSMOCG00000011739	Sbds	99	84.739	ENSNBRG00000017027	sbds	100	84.739	Neolamprologus_brichardi
ENSMOCG00000011739	Sbds	100	97.600	ENSNLEG00000013288	SBDS	100	97.600	Nomascus_leucogenys
ENSMOCG00000011739	Sbds	100	96.000	ENSOPRG00000008721	SBDS	100	96.000	Ochotona_princeps
ENSMOCG00000011739	Sbds	100	88.000	ENSODEG00000019253	-	84	88.000	Octodon_degus
ENSMOCG00000011739	Sbds	99	77.108	ENSODEG00000001116	-	99	77.108	Octodon_degus
ENSMOCG00000011739	Sbds	99	72.691	ENSODEG00000000137	-	85	76.000	Octodon_degus
ENSMOCG00000011739	Sbds	99	83.936	ENSONIG00000005874	sbds	100	83.936	Oreochromis_niloticus
ENSMOCG00000011739	Sbds	83	90.338	ENSOANG00000007674	-	100	90.338	Ornithorhynchus_anatinus
ENSMOCG00000011739	Sbds	100	96.800	ENSOCUG00000003170	SBDS	100	96.800	Oryctolagus_cuniculus
ENSMOCG00000011739	Sbds	99	81.124	ENSORLG00000023489	sbds	100	81.124	Oryzias_latipes
ENSMOCG00000011739	Sbds	99	80.723	ENSORLG00020019282	sbds	100	80.723	Oryzias_latipes_hni
ENSMOCG00000011739	Sbds	99	80.723	ENSORLG00015008005	sbds	100	80.723	Oryzias_latipes_hsok
ENSMOCG00000011739	Sbds	99	81.526	ENSOMEG00000022747	sbds	100	81.526	Oryzias_melastigma
ENSMOCG00000011739	Sbds	100	97.600	ENSOGAG00000009011	-	100	97.600	Otolemur_garnettii
ENSMOCG00000011739	Sbds	100	81.200	ENSOGAG00000015036	-	100	81.200	Otolemur_garnettii
ENSMOCG00000011739	Sbds	100	98.000	ENSOARG00000010609	SBDS	100	98.000	Ovis_aries
ENSMOCG00000011739	Sbds	100	96.800	ENSPPAG00000043889	-	100	96.800	Pan_paniscus
ENSMOCG00000011739	Sbds	100	97.600	ENSPPRG00000002307	SBDS	100	97.600	Panthera_pardus
ENSMOCG00000011739	Sbds	100	97.600	ENSPTIG00000021308	SBDS	100	97.600	Panthera_tigris_altaica
ENSMOCG00000011739	Sbds	100	97.600	ENSPTRG00000019254	SBDS	100	97.600	Pan_troglodytes
ENSMOCG00000011739	Sbds	100	82.800	ENSPTRG00000050835	-	100	82.800	Pan_troglodytes
ENSMOCG00000011739	Sbds	87	94.931	ENSPTRG00000048174	-	96	94.931	Pan_troglodytes
ENSMOCG00000011739	Sbds	100	82.400	ENSPTRG00000047744	-	100	82.400	Pan_troglodytes
ENSMOCG00000011739	Sbds	100	97.200	ENSPANG00000004078	SBDS	100	97.200	Papio_anubis
ENSMOCG00000011739	Sbds	100	84.800	ENSPKIG00000006489	sbds	100	84.800	Paramormyrops_kingsleyae
ENSMOCG00000011739	Sbds	83	89.855	ENSPSIG00000014603	SBDS	99	89.855	Pelodiscus_sinensis
ENSMOCG00000011739	Sbds	99	82.329	ENSPMGG00000004246	sbds	100	82.329	Periophthalmus_magnuspinnatus
ENSMOCG00000011739	Sbds	100	98.800	ENSPEMG00000008728	Sbds	100	98.800	Peromyscus_maniculatus_bairdii
ENSMOCG00000011739	Sbds	100	95.200	ENSPCIG00000029718	SBDS	100	95.200	Phascolarctos_cinereus
ENSMOCG00000011739	Sbds	99	81.526	ENSPFOG00000015837	sbds	100	81.526	Poecilia_formosa
ENSMOCG00000011739	Sbds	99	81.526	ENSPLAG00000003641	sbds	100	81.526	Poecilia_latipinna
ENSMOCG00000011739	Sbds	99	81.526	ENSPMEG00000019483	sbds	100	81.526	Poecilia_mexicana
ENSMOCG00000011739	Sbds	99	81.124	ENSPREG00000018758	sbds	100	81.124	Poecilia_reticulata
ENSMOCG00000011739	Sbds	100	97.600	ENSPPYG00000017513	SBDS	100	97.600	Pongo_abelii
ENSMOCG00000011739	Sbds	100	98.000	ENSPCOG00000021098	SBDS	100	98.000	Propithecus_coquereli
ENSMOCG00000011739	Sbds	100	97.600	ENSPVAG00000009369	SBDS	100	97.600	Pteropus_vampyrus
ENSMOCG00000011739	Sbds	99	84.337	ENSPNYG00000022403	sbds	100	84.337	Pundamilia_nyererei
ENSMOCG00000011739	Sbds	100	85.600	ENSPNAG00000001120	sbds	100	85.600	Pygocentrus_nattereri
ENSMOCG00000011739	Sbds	100	98.800	ENSRNOG00000000888	Sbds	100	98.800	Rattus_norvegicus
ENSMOCG00000011739	Sbds	100	97.600	ENSRBIG00000035557	SBDS	100	97.600	Rhinopithecus_bieti
ENSMOCG00000011739	Sbds	100	97.600	ENSRROG00000040842	-	100	97.600	Rhinopithecus_roxellana
ENSMOCG00000011739	Sbds	100	79.600	ENSRROG00000041986	-	100	77.600	Rhinopithecus_roxellana
ENSMOCG00000011739	Sbds	96	44.082	YLR022C	-	96	42.683	Saccharomyces_cerevisiae
ENSMOCG00000011739	Sbds	93	96.552	ENSSBOG00000022460	SBDS	100	96.552	Saimiri_boliviensis_boliviensis
ENSMOCG00000011739	Sbds	100	82.400	ENSSHAG00000010263	SBDS	100	82.400	Sarcophilus_harrisii
ENSMOCG00000011739	Sbds	100	86.000	ENSSFOG00015001108	sbds	100	86.000	Scleropages_formosus
ENSMOCG00000011739	Sbds	99	84.337	ENSSMAG00000020506	sbds	100	84.337	Scophthalmus_maximus
ENSMOCG00000011739	Sbds	99	83.133	ENSSDUG00000001528	sbds	100	83.133	Seriola_dumerili
ENSMOCG00000011739	Sbds	99	83.534	ENSSLDG00000003659	sbds	100	83.534	Seriola_lalandi_dorsalis
ENSMOCG00000011739	Sbds	61	98.039	ENSSARG00000013132	-	100	98.039	Sorex_araneus
ENSMOCG00000011739	Sbds	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSMOCG00000011739	Sbds	100	86.400	ENSSPUG00000002699	SBDS	100	86.400	Sphenodon_punctatus
ENSMOCG00000011739	Sbds	99	83.534	ENSSPAG00000016419	sbds	100	76.000	Stegastes_partitus
ENSMOCG00000011739	Sbds	100	97.600	ENSSSCG00000007732	SBDS	100	97.600	Sus_scrofa
ENSMOCG00000011739	Sbds	66	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSMOCG00000011739	Sbds	99	83.534	ENSTRUG00000021443	sbds	100	83.534	Takifugu_rubripes
ENSMOCG00000011739	Sbds	99	82.329	ENSTNIG00000019000	sbds	100	82.329	Tetraodon_nigroviridis
ENSMOCG00000011739	Sbds	83	83.173	ENSTBEG00000001178	SBDS	100	83.173	Tupaia_belangeri
ENSMOCG00000011739	Sbds	100	78.000	ENSTTRG00000003921	SBDS	100	78.000	Tursiops_truncatus
ENSMOCG00000011739	Sbds	100	97.200	ENSUAMG00000001326	SBDS	100	97.200	Ursus_americanus
ENSMOCG00000011739	Sbds	100	97.200	ENSUMAG00000015353	SBDS	100	97.200	Ursus_maritimus
ENSMOCG00000011739	Sbds	100	96.800	ENSVVUG00000016478	SBDS	100	96.800	Vulpes_vulpes
ENSMOCG00000011739	Sbds	100	86.000	ENSXETG00000010093	sbds	100	86.000	Xenopus_tropicalis
ENSMOCG00000011739	Sbds	99	74.297	ENSXCOG00000010639	sbds	100	74.297	Xiphophorus_couchianus
ENSMOCG00000011739	Sbds	99	81.928	ENSXMAG00000006065	sbds	100	81.928	Xiphophorus_maculatus