EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000011814 (Gene tree)
Gene ID: 101995587
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|HELIC2|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 32399 bases
Position: chrJH996428.1:35584745-35617143
Accession: 101995587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000011585	ResIII	PF04851.15	1.5e-25	1	2
ENSMOCP00000011585	ResIII	PF04851.15	1.5e-25	2	2
ENSMOCP00000011585	DEAD	PF00270.29	2e-52	1	2
ENSMOCP00000011585	DEAD	PF00270.29	2e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000015212	-	6276	XM_013352600	ENSMOCP00000011585	2091 (aa)	XP_013208054	-

Gene Model

Click here to download ENSMOCG00000011814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000011814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000011814	Snrnp200	76	31.840	ENSMOCG00000014812	Hfm1	59	31.840
ENSMOCG00000011814	Snrnp200	88	42.429	ENSMOCG00000004549	Ascc3	80	44.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000011814	Snrnp200	100	97.238	ENSG00000144028	SNRNP200	99	99.830	Homo_sapiens
ENSMOCG00000011814	Snrnp200	99	89.103	ENSAPOG00000010223	snrnp200	99	88.998	Acanthochromis_polyacanthus
ENSMOCG00000011814	Snrnp200	100	97.191	ENSAMEG00000008996	SNRNP200	100	97.191	Ailuropoda_melanoleuca
ENSMOCG00000011814	Snrnp200	97	88.330	ENSACIG00000001764	snrnp200	98	88.330	Amphilophus_citrinellus
ENSMOCG00000011814	Snrnp200	99	89.009	ENSAOCG00000024593	snrnp200	100	88.561	Amphiprion_ocellaris
ENSMOCG00000011814	Snrnp200	97	88.614	ENSAPEG00000012554	snrnp200	100	88.614	Amphiprion_percula
ENSMOCG00000011814	Snrnp200	99	88.821	ENSATEG00000022522	snrnp200	99	88.717	Anabas_testudineus
ENSMOCG00000011814	Snrnp200	99	95.144	ENSAPLG00000004313	SNRNP200	100	95.144	Anas_platyrhynchos
ENSMOCG00000011814	Snrnp200	99	94.296	ENSACAG00000000434	SNRNP200	100	94.296	Anolis_carolinensis
ENSMOCG00000011814	Snrnp200	100	96.383	ENSANAG00000036625	SNRNP200	100	96.383	Aotus_nancymaae
ENSMOCG00000011814	Snrnp200	99	88.774	ENSACLG00000011188	snrnp200	99	88.670	Astatotilapia_calliptera
ENSMOCG00000011814	Snrnp200	99	88.722	ENSAMXG00000005684	snrnp200	99	88.618	Astyanax_mexicanus
ENSMOCG00000011814	Snrnp200	100	96.629	ENSBTAG00000000848	SNRNP200	100	96.629	Bos_taurus
ENSMOCG00000011814	Snrnp200	100	97.191	ENSCJAG00000007514	SNRNP200	100	97.191	Callithrix_jacchus
ENSMOCG00000011814	Snrnp200	100	96.407	ENSCAFG00020019979	SNRNP200	100	99.825	Canis_lupus_dingo
ENSMOCG00000011814	Snrnp200	100	96.816	ENSCHIG00000020611	SNRNP200	100	96.816	Capra_hircus
ENSMOCG00000011814	Snrnp200	100	97.238	ENSTSYG00000010467	SNRNP200	100	97.238	Carlito_syrichta
ENSMOCG00000011814	Snrnp200	99	96.756	ENSCAPG00000017234	SNRNP200	99	96.756	Cavia_aperea
ENSMOCG00000011814	Snrnp200	100	97.051	ENSCPOG00000006776	SNRNP200	100	97.051	Cavia_porcellus
ENSMOCG00000011814	Snrnp200	100	97.191	ENSCCAG00000033962	SNRNP200	100	97.191	Cebus_capucinus
ENSMOCG00000011814	Snrnp200	100	97.238	ENSCATG00000015790	SNRNP200	100	97.238	Cercocebus_atys
ENSMOCG00000011814	Snrnp200	100	96.910	ENSCLAG00000004116	SNRNP200	100	96.910	Chinchilla_lanigera
ENSMOCG00000011814	Snrnp200	100	97.191	ENSCSAG00000017369	SNRNP200	100	97.191	Chlorocebus_sabaeus
ENSMOCG00000011814	Snrnp200	75	99.213	ENSCHOG00000012981	-	57	99.213	Choloepus_hoffmanni
ENSMOCG00000011814	Snrnp200	100	95.138	ENSCPBG00000022571	SNRNP200	100	95.138	Chrysemys_picta_bellii
ENSMOCG00000011814	Snrnp200	99	75.292	ENSCING00000005082	-	99	75.292	Ciona_intestinalis
ENSMOCG00000011814	Snrnp200	100	91.733	ENSCANG00000033932	SNRNP200	100	97.013	Colobus_angolensis_palliatus
ENSMOCG00000011814	Snrnp200	100	97.378	ENSCGRG00001022610	Snrnp200	100	97.378	Cricetulus_griseus_chok1gshd
ENSMOCG00000011814	Snrnp200	100	96.821	ENSCGRG00000016472	Snrnp200	100	96.821	Cricetulus_griseus_crigri
ENSMOCG00000011814	Snrnp200	100	87.968	ENSCSEG00000016399	snrnp200	100	87.968	Cynoglossus_semilaevis
ENSMOCG00000011814	Snrnp200	100	83.848	ENSCVAG00000017631	snrnp200	99	83.848	Cyprinodon_variegatus
ENSMOCG00000011814	Snrnp200	100	88.665	ENSDARG00000077536	snrnp200	99	88.665	Danio_rerio
ENSMOCG00000011814	Snrnp200	100	95.599	ENSDNOG00000011227	SNRNP200	100	95.599	Dasypus_novemcinctus
ENSMOCG00000011814	Snrnp200	100	95.697	ENSDORG00000005861	Snrnp200	100	95.697	Dipodomys_ordii
ENSMOCG00000011814	Snrnp200	100	72.926	FBgn0263599	l(3)72Ab	99	72.926	Drosophila_melanogaster
ENSMOCG00000011814	Snrnp200	95	94.832	ENSETEG00000000162	SNRNP200	74	94.832	Echinops_telfairi
ENSMOCG00000011814	Snrnp200	85	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSMOCG00000011814	Snrnp200	100	96.224	ENSEASG00005001884	SNRNP200	100	96.224	Equus_asinus_asinus
ENSMOCG00000011814	Snrnp200	100	97.191	ENSECAG00000019675	SNRNP200	99	99.392	Equus_caballus
ENSMOCG00000011814	Snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	91	100.000	Erinaceus_europaeus
ENSMOCG00000011814	Snrnp200	99	89.009	ENSELUG00000018948	snrnp200	99	88.904	Esox_lucius
ENSMOCG00000011814	Snrnp200	100	97.238	ENSFCAG00000010699	SNRNP200	100	97.238	Felis_catus
ENSMOCG00000011814	Snrnp200	96	90.180	ENSFALG00000001368	-	94	92.857	Ficedula_albicollis
ENSMOCG00000011814	Snrnp200	100	96.957	ENSFDAG00000004683	SNRNP200	100	96.957	Fukomys_damarensis
ENSMOCG00000011814	Snrnp200	100	86.049	ENSFHEG00000003786	snrnp200	99	86.049	Fundulus_heteroclitus
ENSMOCG00000011814	Snrnp200	100	87.845	ENSGMOG00000004881	snrnp200	99	87.798	Gadus_morhua
ENSMOCG00000011814	Snrnp200	100	86.236	ENSGAFG00000010807	snrnp200	99	86.236	Gambusia_affinis
ENSMOCG00000011814	Snrnp200	100	88.183	ENSGACG00000011474	snrnp200	99	88.090	Gasterosteus_aculeatus
ENSMOCG00000011814	Snrnp200	95	97.590	ENSGAGG00000016069	SNRNP200	100	94.444	Gopherus_agassizii
ENSMOCG00000011814	Snrnp200	100	97.238	ENSGGOG00000005174	SNRNP200	100	97.238	Gorilla_gorilla
ENSMOCG00000011814	Snrnp200	97	85.806	ENSHBUG00000011322	snrnp200	99	85.852	Haplochromis_burtoni
ENSMOCG00000011814	Snrnp200	100	97.051	ENSHGLG00000006654	SNRNP200	100	97.051	Heterocephalus_glaber_female
ENSMOCG00000011814	Snrnp200	100	97.051	ENSHGLG00100018594	SNRNP200	100	97.051	Heterocephalus_glaber_male
ENSMOCG00000011814	Snrnp200	100	97.191	ENSSTOG00000016351	SNRNP200	100	97.191	Ictidomys_tridecemlineatus
ENSMOCG00000011814	Snrnp200	100	97.097	ENSJJAG00000023659	Snrnp200	100	97.097	Jaculus_jaculus
ENSMOCG00000011814	Snrnp200	100	85.768	ENSKMAG00000003665	snrnp200	99	85.768	Kryptolebias_marmoratus
ENSMOCG00000011814	Snrnp200	100	88.483	ENSLBEG00000021585	snrnp200	99	88.483	Labrus_bergylta
ENSMOCG00000011814	Snrnp200	84	94.282	ENSLACG00000000226	SNRNP200	99	94.722	Latimeria_chalumnae
ENSMOCG00000011814	Snrnp200	100	90.122	ENSLOCG00000015198	snrnp200	99	90.122	Lepisosteus_oculatus
ENSMOCG00000011814	Snrnp200	100	96.816	ENSLAFG00000015626	SNRNP200	100	96.816	Loxodonta_africana
ENSMOCG00000011814	Snrnp200	100	97.191	ENSMFAG00000040174	SNRNP200	99	99.415	Macaca_fascicularis
ENSMOCG00000011814	Snrnp200	100	97.191	ENSMMUG00000023261	SNRNP200	100	97.191	Macaca_mulatta
ENSMOCG00000011814	Snrnp200	100	97.144	ENSMNEG00000032398	SNRNP200	100	97.144	Macaca_nemestrina
ENSMOCG00000011814	Snrnp200	100	97.238	ENSMLEG00000019083	SNRNP200	99	99.415	Mandrillus_leucophaeus
ENSMOCG00000011814	Snrnp200	100	88.489	ENSMAMG00000007851	snrnp200	99	88.489	Mastacembelus_armatus
ENSMOCG00000011814	Snrnp200	97	85.806	ENSMZEG00005010787	snrnp200	99	85.852	Maylandia_zebra
ENSMOCG00000011814	Snrnp200	97	94.630	ENSMGAG00000001831	SNRNP200	100	94.630	Meleagris_gallopavo
ENSMOCG00000011814	Snrnp200	100	97.425	ENSMAUG00000011825	Snrnp200	100	97.425	Mesocricetus_auratus
ENSMOCG00000011814	Snrnp200	100	97.191	ENSMICG00000004710	SNRNP200	100	97.191	Microcebus_murinus
ENSMOCG00000011814	Snrnp200	99	87.083	ENSMMOG00000014167	snrnp200	99	86.985	Mola_mola
ENSMOCG00000011814	Snrnp200	100	96.301	ENSMODG00000008475	SNRNP200	100	96.301	Monodelphis_domestica
ENSMOCG00000011814	Snrnp200	99	88.868	ENSMALG00000001973	snrnp200	99	88.764	Monopterus_albus
ENSMOCG00000011814	Snrnp200	100	97.238	MGP_CAROLIEiJ_G0024250	Snrnp200	100	97.238	Mus_caroli
ENSMOCG00000011814	Snrnp200	100	97.285	ENSMUSG00000003660	Snrnp200	100	97.285	Mus_musculus
ENSMOCG00000011814	Snrnp200	100	97.331	MGP_PahariEiJ_G0025695	Snrnp200	100	97.331	Mus_pahari
ENSMOCG00000011814	Snrnp200	100	97.285	MGP_SPRETEiJ_G0025170	Snrnp200	100	100.000	Mus_spretus
ENSMOCG00000011814	Snrnp200	100	97.144	ENSMPUG00000008949	SNRNP200	100	97.144	Mustela_putorius_furo
ENSMOCG00000011814	Snrnp200	100	96.494	ENSMLUG00000010493	SNRNP200	100	96.494	Myotis_lucifugus
ENSMOCG00000011814	Snrnp200	100	92.884	ENSMLUG00000027511	-	100	92.884	Myotis_lucifugus
ENSMOCG00000011814	Snrnp200	100	97.331	ENSNGAG00000021993	Snrnp200	100	97.331	Nannospalax_galili
ENSMOCG00000011814	Snrnp200	90	90.326	ENSNBRG00000017960	snrnp200	95	90.326	Neolamprologus_brichardi
ENSMOCG00000011814	Snrnp200	100	92.967	ENSNLEG00000000025	SNRNP200	100	93.691	Nomascus_leucogenys
ENSMOCG00000011814	Snrnp200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSMOCG00000011814	Snrnp200	100	93.305	ENSOPRG00000015464	SNRNP200	100	93.305	Ochotona_princeps
ENSMOCG00000011814	Snrnp200	100	97.089	ENSODEG00000008366	SNRNP200	100	97.089	Octodon_degus
ENSMOCG00000011814	Snrnp200	99	88.774	ENSONIG00000010714	snrnp200	99	88.670	Oreochromis_niloticus
ENSMOCG00000011814	Snrnp200	100	97.191	ENSOCUG00000009864	SNRNP200	100	97.191	Oryctolagus_cuniculus
ENSMOCG00000011814	Snrnp200	100	88.624	ENSORLG00000012286	snrnp200	100	88.624	Oryzias_latipes
ENSMOCG00000011814	Snrnp200	100	88.624	ENSORLG00020004648	snrnp200	100	88.624	Oryzias_latipes_hni
ENSMOCG00000011814	Snrnp200	100	88.624	ENSORLG00015019114	snrnp200	100	88.624	Oryzias_latipes_hsok
ENSMOCG00000011814	Snrnp200	99	88.868	ENSOMEG00000011834	snrnp200	99	88.764	Oryzias_melastigma
ENSMOCG00000011814	Snrnp200	100	97.238	ENSOGAG00000006879	SNRNP200	100	97.238	Otolemur_garnettii
ENSMOCG00000011814	Snrnp200	100	95.788	ENSOARG00000013949	SNRNP200	100	95.788	Ovis_aries
ENSMOCG00000011814	Snrnp200	100	97.238	ENSPPAG00000041559	SNRNP200	100	97.238	Pan_paniscus
ENSMOCG00000011814	Snrnp200	100	97.238	ENSPPRG00000004435	SNRNP200	100	97.238	Panthera_pardus
ENSMOCG00000011814	Snrnp200	100	96.770	ENSPTIG00000006380	SNRNP200	100	96.770	Panthera_tigris_altaica
ENSMOCG00000011814	Snrnp200	100	97.238	ENSPTRG00000012230	SNRNP200	100	97.238	Pan_troglodytes
ENSMOCG00000011814	Snrnp200	100	97.191	ENSPANG00000006017	SNRNP200	100	97.191	Papio_anubis
ENSMOCG00000011814	Snrnp200	100	89.279	ENSPKIG00000014762	snrnp200	99	89.279	Paramormyrops_kingsleyae
ENSMOCG00000011814	Snrnp200	100	94.104	ENSPSIG00000008580	SNRNP200	100	94.104	Pelodiscus_sinensis
ENSMOCG00000011814	Snrnp200	100	96.301	ENSPCIG00000023050	SNRNP200	100	96.301	Phascolarctos_cinereus
ENSMOCG00000011814	Snrnp200	100	88.629	ENSPFOG00000015110	snrnp200	99	88.629	Poecilia_formosa
ENSMOCG00000011814	Snrnp200	97	88.187	ENSPLAG00000006711	snrnp200	99	88.187	Poecilia_latipinna
ENSMOCG00000011814	Snrnp200	97	88.132	ENSPMEG00000021166	snrnp200	99	88.132	Poecilia_mexicana
ENSMOCG00000011814	Snrnp200	100	88.717	ENSPREG00000008875	snrnp200	99	88.717	Poecilia_reticulata
ENSMOCG00000011814	Snrnp200	100	97.238	ENSPPYG00000012068	SNRNP200	100	97.238	Pongo_abelii
ENSMOCG00000011814	Snrnp200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSMOCG00000011814	Snrnp200	100	97.238	ENSPCOG00000024608	SNRNP200	100	97.238	Propithecus_coquereli
ENSMOCG00000011814	Snrnp200	96	98.158	ENSPVAG00000005860	SNRNP200	93	98.158	Pteropus_vampyrus
ENSMOCG00000011814	Snrnp200	99	84.262	ENSPNYG00000017476	snrnp200	99	84.174	Pundamilia_nyererei
ENSMOCG00000011814	Snrnp200	100	84.215	ENSPNAG00000010998	snrnp200	99	84.215	Pygocentrus_nattereri
ENSMOCG00000011814	Snrnp200	100	97.425	ENSRNOG00000012157	Snrnp200	100	97.425	Rattus_norvegicus
ENSMOCG00000011814	Snrnp200	100	97.238	ENSRBIG00000044690	-	100	97.238	Rhinopithecus_bieti
ENSMOCG00000011814	Snrnp200	100	97.238	ENSRROG00000037952	-	100	97.238	Rhinopithecus_roxellana
ENSMOCG00000011814	Snrnp200	100	97.191	ENSSBOG00000035471	SNRNP200	100	97.191	Saimiri_boliviensis_boliviensis
ENSMOCG00000011814	Snrnp200	97	96.130	ENSSHAG00000000758	SNRNP200	100	96.130	Sarcophilus_harrisii
ENSMOCG00000011814	Snrnp200	99	89.854	ENSSFOG00015018826	snrnp200	99	89.747	Scleropages_formosus
ENSMOCG00000011814	Snrnp200	99	88.680	ENSSMAG00000005463	snrnp200	99	88.577	Scophthalmus_maximus
ENSMOCG00000011814	Snrnp200	99	88.915	ENSSDUG00000021410	snrnp200	99	88.811	Seriola_dumerili
ENSMOCG00000011814	Snrnp200	99	88.868	ENSSLDG00000010884	snrnp200	99	88.764	Seriola_lalandi_dorsalis
ENSMOCG00000011814	Snrnp200	95	95.184	ENSSARG00000010728	SNRNP200	96	95.184	Sorex_araneus
ENSMOCG00000011814	Snrnp200	100	95.037	ENSSPUG00000003726	-	100	95.037	Sphenodon_punctatus
ENSMOCG00000011814	Snrnp200	99	89.009	ENSSPAG00000001842	snrnp200	99	88.904	Stegastes_partitus
ENSMOCG00000011814	Snrnp200	100	97.051	ENSSSCG00000008127	SNRNP200	100	97.051	Sus_scrofa
ENSMOCG00000011814	Snrnp200	99	86.503	ENSTGUG00000014475	-	100	86.503	Taeniopygia_guttata
ENSMOCG00000011814	Snrnp200	99	88.633	ENSTRUG00000001307	snrnp200	99	88.530	Takifugu_rubripes
ENSMOCG00000011814	Snrnp200	100	84.396	ENSTNIG00000004320	snrnp200	100	84.019	Tetraodon_nigroviridis
ENSMOCG00000011814	Snrnp200	84	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSMOCG00000011814	Snrnp200	100	96.863	ENSTTRG00000004983	SNRNP200	100	96.863	Tursiops_truncatus
ENSMOCG00000011814	Snrnp200	74	89.970	ENSUAMG00000008395	-	95	89.792	Ursus_americanus
ENSMOCG00000011814	Snrnp200	100	97.238	ENSUMAG00000012385	SNRNP200	100	97.238	Ursus_maritimus
ENSMOCG00000011814	Snrnp200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSMOCG00000011814	Snrnp200	100	97.011	ENSVVUG00000026247	SNRNP200	100	97.011	Vulpes_vulpes
ENSMOCG00000011814	Snrnp200	100	92.333	ENSXETG00000001243	snrnp200	100	92.333	Xenopus_tropicalis
ENSMOCG00000011814	Snrnp200	97	88.490	ENSXMAG00000002058	snrnp200	98	88.490	Xiphophorus_maculatus