EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000012087 (Gene tree)
Gene ID: 101992070
Gene Symbol: Scaf4
Alias: Sfrs15|Sra4|Srsf15
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 57320 bases
Position: chr2:97624485-97681804
Accession: 101992070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000011851	RRM_1	PF00076.22	2.9e-09	1	1
ENSMOCP00000011848	RRM_1	PF00076.22	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000015557	-	3402	-	ENSMOCP00000011851	1133 (aa)	-	-
ENSMOCT00000015553	-	3600	XM_005345341	ENSMOCP00000011848	1199 (aa)	XP_005345398	-

Gene Model

Click here to download ENSMOCG00000012087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012087	Scaf4	95	92.218	ENSG00000156304	SCAF4	100	85.702	Homo_sapiens
ENSMOCG00000012087	Scaf4	69	91.016	ENSAMEG00000014987	SCAF4	95	90.993	Ailuropoda_melanoleuca
ENSMOCG00000012087	Scaf4	99	70.445	ENSAPLG00000002509	SCAF4	99	67.801	Anas_platyrhynchos
ENSMOCG00000012087	Scaf4	95	91.192	ENSANAG00000037494	SCAF4	100	85.541	Aotus_nancymaae
ENSMOCG00000012087	Scaf4	100	85.913	ENSBTAG00000018855	SCAF4	100	85.130	Bos_taurus
ENSMOCG00000012087	Scaf4	95	91.085	ENSCJAG00000008993	SCAF4	100	85.134	Callithrix_jacchus
ENSMOCG00000012087	Scaf4	95	92.057	ENSCAFG00000008863	SCAF4	98	91.523	Canis_familiaris
ENSMOCG00000012087	Scaf4	98	86.887	ENSCAFG00020026019	SCAF4	98	91.523	Canis_lupus_dingo
ENSMOCG00000012087	Scaf4	100	85.752	ENSCHIG00000008385	SCAF4	100	84.448	Capra_hircus
ENSMOCG00000012087	Scaf4	99	82.011	ENSTSYG00000011344	SCAF4	82	84.465	Carlito_syrichta
ENSMOCG00000012087	Scaf4	96	89.974	ENSCPOG00000012443	SCAF4	100	83.391	Cavia_porcellus
ENSMOCG00000012087	Scaf4	95	91.818	ENSCCAG00000033727	SCAF4	95	91.908	Cebus_capucinus
ENSMOCG00000012087	Scaf4	95	91.108	ENSCATG00000030379	SCAF4	100	85.727	Cercocebus_atys
ENSMOCG00000012087	Scaf4	94	91.120	ENSCLAG00000006298	SCAF4	100	84.622	Chinchilla_lanigera
ENSMOCG00000012087	Scaf4	100	86.563	ENSCSAG00000009438	SCAF4	100	85.739	Chlorocebus_sabaeus
ENSMOCG00000012087	Scaf4	95	91.948	ENSCANG00000029847	SCAF4	100	86.123	Colobus_angolensis_palliatus
ENSMOCG00000012087	Scaf4	99	92.636	ENSCGRG00001020821	Scaf4	100	92.887	Cricetulus_griseus_chok1gshd
ENSMOCG00000012087	Scaf4	99	92.288	ENSCGRG00000014360	Scaf4	100	92.456	Cricetulus_griseus_crigri
ENSMOCG00000012087	Scaf4	98	85.956	ENSDNOG00000019014	SCAF4	94	82.753	Dasypus_novemcinctus
ENSMOCG00000012087	Scaf4	88	84.203	ENSETEG00000000583	SCAF4	97	84.011	Echinops_telfairi
ENSMOCG00000012087	Scaf4	95	92.318	ENSEASG00005007756	SCAF4	98	91.788	Equus_asinus_asinus
ENSMOCG00000012087	Scaf4	95	91.797	ENSECAG00000014248	SCAF4	98	92.185	Equus_caballus
ENSMOCG00000012087	Scaf4	55	53.633	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSMOCG00000012087	Scaf4	100	87.130	ENSFCAG00000002228	SCAF4	98	91.258	Felis_catus
ENSMOCG00000012087	Scaf4	99	84.706	ENSFDAG00000017780	SCAF4	98	92.063	Fukomys_damarensis
ENSMOCG00000012087	Scaf4	99	75.258	ENSGALG00000033965	SCAF4	99	69.324	Gallus_gallus
ENSMOCG00000012087	Scaf4	54	64.822	ENSGAFG00000019460	scaf4a	55	77.358	Gambusia_affinis
ENSMOCG00000012087	Scaf4	73	52.927	ENSGACG00000020580	scaf4a	52	72.956	Gasterosteus_aculeatus
ENSMOCG00000012087	Scaf4	92	86.751	ENSGGOG00000015557	SCAF4	100	82.424	Gorilla_gorilla
ENSMOCG00000012087	Scaf4	95	91.016	ENSHGLG00000010582	SCAF4	100	84.483	Heterocephalus_glaber_female
ENSMOCG00000012087	Scaf4	94	91.016	ENSHGLG00100009441	SCAF4	100	84.952	Heterocephalus_glaber_male
ENSMOCG00000012087	Scaf4	66	59.231	ENSIPUG00000011285	scaf4	52	76.220	Ictalurus_punctatus
ENSMOCG00000012087	Scaf4	94	92.839	ENSSTOG00000004450	SCAF4	100	82.643	Ictidomys_tridecemlineatus
ENSMOCG00000012087	Scaf4	99	85.953	ENSJJAG00000019447	Scaf4	98	87.254	Jaculus_jaculus
ENSMOCG00000012087	Scaf4	57	60.920	ENSKMAG00000005742	scaf4b	54	74.522	Kryptolebias_marmoratus
ENSMOCG00000012087	Scaf4	96	59.015	ENSLACG00000013913	SCAF4	58	66.878	Latimeria_chalumnae
ENSMOCG00000012087	Scaf4	82	63.010	ENSLOCG00000009162	scaf4a	59	61.591	Lepisosteus_oculatus
ENSMOCG00000012087	Scaf4	98	91.803	ENSLAFG00000010710	SCAF4	94	91.269	Loxodonta_africana
ENSMOCG00000012087	Scaf4	95	90.629	ENSMFAG00000037668	SCAF4	100	84.596	Macaca_fascicularis
ENSMOCG00000012087	Scaf4	95	90.501	ENSMMUG00000001712	SCAF4	100	84.689	Macaca_mulatta
ENSMOCG00000012087	Scaf4	95	90.897	ENSMNEG00000032966	SCAF4	100	84.265	Macaca_nemestrina
ENSMOCG00000012087	Scaf4	99	86.186	ENSMLEG00000039674	SCAF4	100	85.789	Mandrillus_leucophaeus
ENSMOCG00000012087	Scaf4	99	74.677	ENSMGAG00000014515	SCAF4	98	74.247	Meleagris_gallopavo
ENSMOCG00000012087	Scaf4	98	89.006	ENSMAUG00000013307	Scaf4	100	88.918	Mesocricetus_auratus
ENSMOCG00000012087	Scaf4	99	87.560	ENSMICG00000005256	SCAF4	100	86.261	Microcebus_murinus
ENSMOCG00000012087	Scaf4	99	79.043	ENSMODG00000021040	SCAF4	100	78.212	Monodelphis_domestica
ENSMOCG00000012087	Scaf4	100	90.774	MGP_CAROLIEiJ_G0020944	Scaf4	100	89.491	Mus_caroli
ENSMOCG00000012087	Scaf4	100	90.323	ENSMUSG00000022983	Scaf4	100	89.448	Mus_musculus
ENSMOCG00000012087	Scaf4	100	88.534	MGP_PahariEiJ_G0016649	Scaf4	100	89.189	Mus_pahari
ENSMOCG00000012087	Scaf4	100	90.969	MGP_SPRETEiJ_G0021850	Scaf4	100	91.549	Mus_spretus
ENSMOCG00000012087	Scaf4	95	90.077	ENSMPUG00000001078	SCAF4	99	84.569	Mustela_putorius_furo
ENSMOCG00000012087	Scaf4	96	77.524	ENSMLUG00000011472	SCAF4	70	90.108	Myotis_lucifugus
ENSMOCG00000012087	Scaf4	99	87.402	ENSNGAG00000005214	Scaf4	99	86.186	Nannospalax_galili
ENSMOCG00000012087	Scaf4	97	91.569	ENSNLEG00000003569	SCAF4	100	85.355	Nomascus_leucogenys
ENSMOCG00000012087	Scaf4	78	89.130	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSMOCG00000012087	Scaf4	95	92.068	ENSODEG00000002718	SCAF4	99	83.979	Octodon_degus
ENSMOCG00000012087	Scaf4	73	52.036	ENSONIG00000004687	scaf4a	50	77.358	Oreochromis_niloticus
ENSMOCG00000012087	Scaf4	100	82.815	ENSOCUG00000008336	SCAF4	100	82.368	Oryctolagus_cuniculus
ENSMOCG00000012087	Scaf4	98	89.987	ENSOGAG00000014653	SCAF4	93	88.720	Otolemur_garnettii
ENSMOCG00000012087	Scaf4	94	90.507	ENSOARG00000013894	SCAF4	98	84.602	Ovis_aries
ENSMOCG00000012087	Scaf4	95	92.218	ENSPPAG00000028535	SCAF4	100	85.702	Pan_paniscus
ENSMOCG00000012087	Scaf4	99	87.940	ENSPPRG00000000635	SCAF4	98	91.126	Panthera_pardus
ENSMOCG00000012087	Scaf4	99	84.595	ENSPTIG00000021578	SCAF4	99	82.281	Panthera_tigris_altaica
ENSMOCG00000012087	Scaf4	95	92.218	ENSPTRG00000013848	SCAF4	100	85.702	Pan_troglodytes
ENSMOCG00000012087	Scaf4	95	90.757	ENSPANG00000017332	SCAF4	100	85.198	Papio_anubis
ENSMOCG00000012087	Scaf4	66	58.701	ENSPKIG00000022408	scaf4a	73	77.914	Paramormyrops_kingsleyae
ENSMOCG00000012087	Scaf4	99	76.064	ENSPSIG00000014242	SCAF4	96	76.796	Pelodiscus_sinensis
ENSMOCG00000012087	Scaf4	58	89.697	ENSPCIG00000028183	SCAF4	91	77.621	Phascolarctos_cinereus
ENSMOCG00000012087	Scaf4	75	50.706	ENSPFOG00000017156	scaf4a	52	75.472	Poecilia_formosa
ENSMOCG00000012087	Scaf4	95	91.839	ENSPPYG00000011355	SCAF4	100	86.204	Pongo_abelii
ENSMOCG00000012087	Scaf4	99	76.228	ENSPCAG00000009998	SCAF4	100	72.607	Procavia_capensis
ENSMOCG00000012087	Scaf4	99	87.726	ENSPCOG00000018710	SCAF4	100	85.998	Propithecus_coquereli
ENSMOCG00000012087	Scaf4	95	91.395	ENSPVAG00000005220	SCAF4	98	91.645	Pteropus_vampyrus
ENSMOCG00000012087	Scaf4	100	84.890	ENSRNOG00000002104	Scaf4	100	85.323	Rattus_norvegicus
ENSMOCG00000012087	Scaf4	94	89.392	ENSRBIG00000040007	SCAF4	95	91.781	Rhinopithecus_bieti
ENSMOCG00000012087	Scaf4	95	92.458	ENSRROG00000029488	SCAF4	100	86.285	Rhinopithecus_roxellana
ENSMOCG00000012087	Scaf4	95	83.594	ENSSHAG00000001581	SCAF4	100	78.291	Sarcophilus_harrisii
ENSMOCG00000012087	Scaf4	62	59.480	ENSSMAG00000003738	scaf4b	57	71.271	Scophthalmus_maximus
ENSMOCG00000012087	Scaf4	99	83.492	ENSSARG00000009994	SCAF4	98	86.815	Sorex_araneus
ENSMOCG00000012087	Scaf4	99	84.443	ENSSSCG00000021023	SCAF4	98	87.237	Sus_scrofa
ENSMOCG00000012087	Scaf4	74	75.394	ENSTGUG00000013464	SCAF4	95	72.404	Taeniopygia_guttata
ENSMOCG00000012087	Scaf4	50	51.460	ENSTRUG00000009536	-	65	59.848	Takifugu_rubripes
ENSMOCG00000012087	Scaf4	99	85.915	ENSTTRG00000010963	SCAF4	100	85.563	Tursiops_truncatus
ENSMOCG00000012087	Scaf4	99	84.917	ENSUAMG00000008860	SCAF4	98	88.079	Ursus_americanus
ENSMOCG00000012087	Scaf4	94	90.104	ENSUMAG00000016962	SCAF4	100	84.982	Ursus_maritimus
ENSMOCG00000012087	Scaf4	94	92.057	ENSVVUG00000002953	SCAF4	98	91.523	Vulpes_vulpes