EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000012519 (Gene tree)
Gene ID: 101979960
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 10710 bases
Position: chr21:23321759-23332468
Accession: 101979960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000012414	RRM_1	PF00076.22	3.3e-18	1	1
ENSMOCP00000012413	RRM_1	PF00076.22	3.3e-18	1	1
ENSMOCP00000012414	RRM_3	PF08777.11	3.5e-29	1	1
ENSMOCP00000012413	RRM_3	PF08777.11	3.5e-29	1	1
ENSMOCP00000012414	La	PF05383.17	1.3e-21	1	1
ENSMOCP00000012413	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016152	-	1725	XM_013350069	ENSMOCP00000012413	574 (aa)	XP_013205523	UPI00038BE443
ENSMOCT00000016153	-	1716	-	ENSMOCP00000012414	571 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000012519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000012519	-	90	94.942	ENSMOCG00000015761	-	100	94.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012519	-	96	83.483	ENSG00000174720	LARP7	95	83.394	Homo_sapiens
ENSMOCG00000012519	-	98	56.469	ENSAPOG00000014570	larp7	95	56.115	Acanthochromis_polyacanthus
ENSMOCG00000012519	-	100	81.132	ENSAMEG00000015642	LARP7	95	82.640	Ailuropoda_melanoleuca
ENSMOCG00000012519	-	98	53.025	ENSACIG00000023850	larp7	94	51.537	Amphilophus_citrinellus
ENSMOCG00000012519	-	96	56.530	ENSAOCG00000016160	larp7	95	55.935	Amphiprion_ocellaris
ENSMOCG00000012519	-	96	55.793	ENSAPEG00000021823	larp7	95	55.935	Amphiprion_percula
ENSMOCG00000012519	-	98	56.153	ENSATEG00000016238	larp7	95	56.863	Anabas_testudineus
ENSMOCG00000012519	-	99	67.667	ENSAPLG00000012887	LARP7	94	68.301	Anas_platyrhynchos
ENSMOCG00000012519	-	99	65.646	ENSACAG00000010662	LARP7	91	66.369	Anolis_carolinensis
ENSMOCG00000012519	-	96	67.086	ENSANAG00000022318	-	94	67.089	Aotus_nancymaae
ENSMOCG00000012519	-	96	81.900	ENSANAG00000031139	-	95	81.802	Aotus_nancymaae
ENSMOCG00000012519	-	98	54.577	ENSACLG00000023184	larp7	95	52.595	Astatotilapia_calliptera
ENSMOCG00000012519	-	99	54.482	ENSAMXG00000002549	larp7	94	54.545	Astyanax_mexicanus
ENSMOCG00000012519	-	100	81.336	ENSBTAG00000009632	LARP7	93	81.835	Bos_taurus
ENSMOCG00000012519	-	96	83.813	ENSCJAG00000003711	LARP7	95	83.725	Callithrix_jacchus
ENSMOCG00000012519	-	96	81.429	ENSCAFG00000011715	LARP7	95	81.329	Canis_familiaris
ENSMOCG00000012519	-	96	82.374	ENSCAFG00020017225	LARP7	95	82.278	Canis_lupus_dingo
ENSMOCG00000012519	-	100	69.391	ENSCHIG00000013971	-	91	86.574	Capra_hircus
ENSMOCG00000012519	-	96	82.374	ENSCHIG00000014163	-	95	82.278	Capra_hircus
ENSMOCG00000012519	-	90	83.430	ENSTSYG00000006769	-	95	83.333	Carlito_syrichta
ENSMOCG00000012519	-	96	74.317	ENSTSYG00000035188	-	97	74.223	Carlito_syrichta
ENSMOCG00000012519	-	100	71.951	ENSCAPG00000009328	LARP7	95	71.715	Cavia_aperea
ENSMOCG00000012519	-	100	80.139	ENSCPOG00000011830	LARP7	95	80.474	Cavia_porcellus
ENSMOCG00000012519	-	96	75.000	ENSCCAG00000023563	-	100	75.000	Cebus_capucinus
ENSMOCG00000012519	-	96	83.692	ENSCCAG00000026787	-	95	83.604	Cebus_capucinus
ENSMOCG00000012519	-	96	83.633	ENSCATG00000043535	LARP7	95	83.544	Cercocebus_atys
ENSMOCG00000012519	-	100	82.404	ENSCLAG00000005894	LARP7	95	83.212	Chinchilla_lanigera
ENSMOCG00000012519	-	96	83.813	ENSCSAG00000003810	LARP7	95	83.725	Chlorocebus_sabaeus
ENSMOCG00000012519	-	100	81.174	ENSCHOG00000002379	-	95	82.149	Choloepus_hoffmanni
ENSMOCG00000012519	-	93	72.458	ENSCHOG00000008967	-	100	72.458	Choloepus_hoffmanni
ENSMOCG00000012519	-	98	67.925	ENSCPBG00000004919	LARP7	96	69.718	Chrysemys_picta_bellii
ENSMOCG00000012519	-	78	36.970	ENSCING00000021685	-	74	36.478	Ciona_intestinalis
ENSMOCG00000012519	-	96	83.662	ENSCANG00000031482	LARP7	94	83.574	Colobus_angolensis_palliatus
ENSMOCG00000012519	-	100	93.206	ENSCGRG00001025050	-	100	93.206	Cricetulus_griseus_chok1gshd
ENSMOCG00000012519	-	90	82.239	ENSCGRG00001012747	-	99	82.625	Cricetulus_griseus_chok1gshd
ENSMOCG00000012519	-	95	85.949	ENSCGRG00000001141	-	100	85.766	Cricetulus_griseus_crigri
ENSMOCG00000012519	-	96	83.242	ENSCGRG00000007642	-	99	83.607	Cricetulus_griseus_crigri
ENSMOCG00000012519	-	98	53.806	ENSCSEG00000009088	larp7	95	54.628	Cynoglossus_semilaevis
ENSMOCG00000012519	-	97	54.225	ENSCVAG00000016852	larp7	78	73.889	Cyprinodon_variegatus
ENSMOCG00000012519	-	98	54.367	ENSDARG00000017315	larp7	93	52.899	Danio_rerio
ENSMOCG00000012519	-	100	80.684	ENSDNOG00000013761	LARP7	95	82.554	Dasypus_novemcinctus
ENSMOCG00000012519	-	96	83.725	ENSDORG00000008896	-	95	83.636	Dipodomys_ordii
ENSMOCG00000012519	-	65	42.012	FBgn0260771	Larp7	66	43.421	Drosophila_melanogaster
ENSMOCG00000012519	-	100	77.453	ENSETEG00000011692	LARP7	95	78.766	Echinops_telfairi
ENSMOCG00000012519	-	100	81.818	ENSEASG00005005592	LARP7	95	83.363	Equus_asinus_asinus
ENSMOCG00000012519	-	100	81.818	ENSECAG00000000834	LARP7	95	83.363	Equus_caballus
ENSMOCG00000012519	-	92	79.696	ENSEEUG00000012824	LARP7	95	79.580	Erinaceus_europaeus
ENSMOCG00000012519	-	98	55.479	ENSELUG00000015341	larp7	88	75.138	Esox_lucius
ENSMOCG00000012519	-	96	82.703	ENSFCAG00000031966	LARP7	95	82.609	Felis_catus
ENSMOCG00000012519	-	99	69.712	ENSFALG00000000972	LARP7	92	70.107	Ficedula_albicollis
ENSMOCG00000012519	-	100	75.347	ENSFDAG00000011855	-	100	75.347	Fukomys_damarensis
ENSMOCG00000012519	-	96	82.514	ENSFDAG00000014048	-	95	82.418	Fukomys_damarensis
ENSMOCG00000012519	-	97	54.982	ENSFHEG00000021652	larp7	95	55.435	Fundulus_heteroclitus
ENSMOCG00000012519	-	99	68.227	ENSGALG00000012048	LARP7	94	68.728	Gallus_gallus
ENSMOCG00000012519	-	98	54.240	ENSGAFG00000015400	larp7	94	53.382	Gambusia_affinis
ENSMOCG00000012519	-	97	52.721	ENSGACG00000019618	larp7	79	71.111	Gasterosteus_aculeatus
ENSMOCG00000012519	-	99	66.667	ENSGAGG00000024520	LARP7	95	68.947	Gopherus_agassizii
ENSMOCG00000012519	-	96	83.483	ENSGGOG00000023567	-	95	83.394	Gorilla_gorilla
ENSMOCG00000012519	-	87	80.473	ENSGGOG00000006438	-	97	80.473	Gorilla_gorilla
ENSMOCG00000012519	-	98	54.930	ENSHBUG00000019223	larp7	95	52.768	Haplochromis_burtoni
ENSMOCG00000012519	-	96	81.508	ENSHGLG00000002716	LARP7	95	81.408	Heterocephalus_glaber_female
ENSMOCG00000012519	-	96	81.508	ENSHGLG00100000332	LARP7	95	81.408	Heterocephalus_glaber_male
ENSMOCG00000012519	-	97	53.436	ENSIPUG00000019886	larp7	94	53.076	Ictalurus_punctatus
ENSMOCG00000012519	-	100	83.133	ENSSTOG00000011789	LARP7	95	85.172	Ictidomys_tridecemlineatus
ENSMOCG00000012519	-	100	85.095	ENSJJAG00000000257	-	100	85.467	Jaculus_jaculus
ENSMOCG00000012519	-	97	52.496	ENSKMAG00000005057	larp7	95	51.332	Kryptolebias_marmoratus
ENSMOCG00000012519	-	98	51.979	ENSLBEG00000020062	larp7	95	51.246	Labrus_bergylta
ENSMOCG00000012519	-	99	58.863	ENSLACG00000013744	LARP7	95	60.938	Latimeria_chalumnae
ENSMOCG00000012519	-	96	49.658	ENSLOCG00000011608	larp7	95	49.398	Lepisosteus_oculatus
ENSMOCG00000012519	-	100	82.504	ENSLAFG00000015769	LARP7	95	84.087	Loxodonta_africana
ENSMOCG00000012519	-	96	83.633	ENSMFAG00000036506	LARP7	95	83.544	Macaca_fascicularis
ENSMOCG00000012519	-	96	83.633	ENSMMUG00000017911	LARP7	95	83.544	Macaca_mulatta
ENSMOCG00000012519	-	96	83.813	ENSMNEG00000034758	LARP7	100	82.143	Macaca_nemestrina
ENSMOCG00000012519	-	96	83.813	ENSMLEG00000026154	LARP7	95	83.725	Mandrillus_leucophaeus
ENSMOCG00000012519	-	98	55.903	ENSMAMG00000005835	larp7	95	55.893	Mastacembelus_armatus
ENSMOCG00000012519	-	98	54.577	ENSMZEG00005002084	larp7	95	52.595	Maylandia_zebra
ENSMOCG00000012519	-	99	68.089	ENSMGAG00000010947	LARP7	95	68.582	Meleagris_gallopavo
ENSMOCG00000012519	-	100	76.379	ENSMAUG00000005625	-	100	76.379	Mesocricetus_auratus
ENSMOCG00000012519	-	96	84.477	ENSMICG00000031035	LARP7	95	84.936	Microcebus_murinus
ENSMOCG00000012519	-	99	73.019	ENSMODG00000005669	LARP7	95	73.890	Monodelphis_domestica
ENSMOCG00000012519	-	100	92.160	MGP_CAROLIEiJ_G0025613	-	100	91.812	Mus_caroli
ENSMOCG00000012519	-	100	91.115	ENSMUSG00000027968	Larp7	100	97.531	Mus_musculus
ENSMOCG00000012519	-	100	91.667	MGP_PahariEiJ_G0027060	-	100	92.147	Mus_pahari
ENSMOCG00000012519	-	100	91.826	MGP_SPRETEiJ_G0026566	Larp7	100	91.826	Mus_spretus
ENSMOCG00000012519	-	95	79.412	ENSMPUG00000018052	-	100	79.412	Mustela_putorius_furo
ENSMOCG00000012519	-	96	83.094	ENSMPUG00000008331	-	95	83.002	Mustela_putorius_furo
ENSMOCG00000012519	-	87	75.198	ENSMLUG00000027214	LARP7	100	75.198	Myotis_lucifugus
ENSMOCG00000012519	-	100	84.483	ENSNGAG00000007368	-	100	85.000	Nannospalax_galili
ENSMOCG00000012519	-	96	83.453	ENSNLEG00000016354	LARP7	94	83.363	Nomascus_leucogenys
ENSMOCG00000012519	-	88	72.745	ENSMEUG00000004739	LARP7	100	73.242	Notamacropus_eugenii
ENSMOCG00000012519	-	85	86.466	ENSOPRG00000009594	-	83	86.466	Ochotona_princeps
ENSMOCG00000012519	-	96	79.204	ENSODEG00000011121	LARP7	98	79.204	Octodon_degus
ENSMOCG00000012519	-	96	54.676	ENSONIG00000008763	larp7	95	52.595	Oreochromis_niloticus
ENSMOCG00000012519	-	99	74.074	ENSOANG00000009298	LARP7	94	74.823	Ornithorhynchus_anatinus
ENSMOCG00000012519	-	100	80.756	ENSOCUG00000007073	LARP7	95	81.917	Oryctolagus_cuniculus
ENSMOCG00000012519	-	96	52.793	ENSORLG00000004978	larp7	94	54.197	Oryzias_latipes
ENSMOCG00000012519	-	96	52.973	ENSORLG00020013825	larp7	94	54.628	Oryzias_latipes_hni
ENSMOCG00000012519	-	97	53.846	ENSOMEG00000006920	larp7	94	55.027	Oryzias_melastigma
ENSMOCG00000012519	-	96	84.050	ENSOGAG00000001643	LARP7	95	83.964	Otolemur_garnettii
ENSMOCG00000012519	-	96	82.290	ENSOARG00000001809	LARP7	95	82.194	Ovis_aries
ENSMOCG00000012519	-	96	83.124	ENSPPAG00000038420	LARP7	94	83.032	Pan_paniscus
ENSMOCG00000012519	-	96	82.554	ENSPPRG00000023256	LARP7	95	82.459	Panthera_pardus
ENSMOCG00000012519	-	92	81.955	ENSPTIG00000021146	LARP7	92	81.853	Panthera_tigris_altaica
ENSMOCG00000012519	-	96	83.483	ENSPTRG00000016380	LARP7	95	83.394	Pan_troglodytes
ENSMOCG00000012519	-	96	83.662	ENSPANG00000006701	LARP7	94	83.574	Papio_anubis
ENSMOCG00000012519	-	98	56.348	ENSPKIG00000023484	larp7	94	57.500	Paramormyrops_kingsleyae
ENSMOCG00000012519	-	99	66.781	ENSPSIG00000014419	LARP7	93	68.638	Pelodiscus_sinensis
ENSMOCG00000012519	-	100	91.282	ENSPEMG00000013978	-	100	91.453	Peromyscus_maniculatus_bairdii
ENSMOCG00000012519	-	97	36.116	ENSPMAG00000005362	larp7	93	36.852	Petromyzon_marinus
ENSMOCG00000012519	-	99	72.987	ENSPCIG00000020284	LARP7	98	79.487	Phascolarctos_cinereus
ENSMOCG00000012519	-	98	54.770	ENSPFOG00000000265	larp7	95	53.065	Poecilia_formosa
ENSMOCG00000012519	-	98	54.850	ENSPLAG00000012181	larp7	94	53.102	Poecilia_latipinna
ENSMOCG00000012519	-	98	54.850	ENSPMEG00000007182	larp7	94	53.102	Poecilia_mexicana
ENSMOCG00000012519	-	99	52.840	ENSPREG00000019513	larp7	94	52.783	Poecilia_reticulata
ENSMOCG00000012519	-	96	83.483	ENSPPYG00000015010	LARP7	95	83.394	Pongo_abelii
ENSMOCG00000012519	-	58	96.154	ENSPCAG00000003373	-	67	96.154	Procavia_capensis
ENSMOCG00000012519	-	76	88.000	ENSPCOG00000023946	LARP7	84	88.000	Propithecus_coquereli
ENSMOCG00000012519	-	100	78.253	ENSPVAG00000000282	LARP7	100	78.253	Pteropus_vampyrus
ENSMOCG00000012519	-	96	53.684	ENSPNAG00000017554	larp7	94	54.594	Pygocentrus_nattereri
ENSMOCG00000012519	-	100	88.174	ENSRNOG00000048989	Larp7	100	89.217	Rattus_norvegicus
ENSMOCG00000012519	-	82	88.889	ENSRBIG00000031916	LARP7	93	88.889	Rhinopithecus_bieti
ENSMOCG00000012519	-	96	83.813	ENSRROG00000033414	LARP7	95	83.725	Rhinopithecus_roxellana
ENSMOCG00000012519	-	96	62.478	ENSSBOG00000022652	-	95	62.342	Saimiri_boliviensis_boliviensis
ENSMOCG00000012519	-	96	83.871	ENSSBOG00000030886	-	95	83.784	Saimiri_boliviensis_boliviensis
ENSMOCG00000012519	-	99	71.959	ENSSHAG00000008153	LARP7	95	72.792	Sarcophilus_harrisii
ENSMOCG00000012519	-	98	56.894	ENSSFOG00015019344	larp7	94	55.296	Scleropages_formosus
ENSMOCG00000012519	-	99	55.594	ENSSMAG00000011296	larp7	94	56.679	Scophthalmus_maximus
ENSMOCG00000012519	-	99	55.726	ENSSDUG00000007045	larp7	95	56.206	Seriola_dumerili
ENSMOCG00000012519	-	52	73.927	ENSSARG00000000190	-	98	74.172	Sorex_araneus
ENSMOCG00000012519	-	98	55.226	ENSSPAG00000016066	larp7	95	55.376	Stegastes_partitus
ENSMOCG00000012519	-	96	82.406	ENSSSCG00000009119	LARP7	95	82.310	Sus_scrofa
ENSMOCG00000012519	-	99	69.060	ENSTGUG00000001804	LARP7	95	68.941	Taeniopygia_guttata
ENSMOCG00000012519	-	97	52.527	ENSTRUG00000004996	larp7	95	52.477	Takifugu_rubripes
ENSMOCG00000012519	-	98	48.448	ENSTNIG00000007183	larp7	95	48.921	Tetraodon_nigroviridis
ENSMOCG00000012519	-	96	79.496	ENSTBEG00000009188	LARP7	95	79.385	Tupaia_belangeri
ENSMOCG00000012519	-	91	79.087	ENSTTRG00000005233	LARP7	100	81.061	Tursiops_truncatus
ENSMOCG00000012519	-	96	82.734	ENSUAMG00000000836	LARP7	95	82.640	Ursus_americanus
ENSMOCG00000012519	-	95	82.299	ENSUMAG00000002263	LARP7	93	82.202	Ursus_maritimus
ENSMOCG00000012519	-	96	82.944	ENSVPAG00000010502	LARP7	95	82.852	Vicugna_pacos
ENSMOCG00000012519	-	96	82.734	ENSVVUG00000002274	LARP7	95	82.640	Vulpes_vulpes
ENSMOCG00000012519	-	98	61.670	ENSXETG00000024097	larp7	94	61.257	Xenopus_tropicalis
ENSMOCG00000012519	-	98	54.545	ENSXCOG00000004883	larp7	83	72.778	Xiphophorus_couchianus
ENSMOCG00000012519	-	98	53.415	ENSXMAG00000008479	larp7	94	53.016	Xiphophorus_maculatus