EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000012588 (Gene tree)
Gene ID: 101984612
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 72742 bases
Position: chrJH996433.1:1727630-1800371
Accession: 101984612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000012515	XRN_N	PF03159.18	1.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016254	-	3450	XM_005365489	ENSMOCP00000012515	950 (aa)	XP_005365546	UPI00038C3DC2

Gene Model

Click here to download ENSMOCG00000012588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000012588	Xrn2	71	39.443	ENSMOCG00000008665	Xrn1	61	38.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012588	Xrn2	100	96.211	ENSG00000088930	XRN2	100	96.211	Homo_sapiens
ENSMOCG00000012588	Xrn2	97	72.222	ENSAPOG00000009818	xrn2	100	70.846	Acanthochromis_polyacanthus
ENSMOCG00000012588	Xrn2	100	96.105	ENSAMEG00000012581	XRN2	100	96.105	Ailuropoda_melanoleuca
ENSMOCG00000012588	Xrn2	90	71.266	ENSACIG00000015047	xrn2	95	75.240	Amphilophus_citrinellus
ENSMOCG00000012588	Xrn2	97	72.406	ENSAOCG00000023632	xrn2	100	71.122	Amphiprion_ocellaris
ENSMOCG00000012588	Xrn2	97	72.329	ENSAPEG00000014871	xrn2	100	70.948	Amphiprion_percula
ENSMOCG00000012588	Xrn2	95	71.723	ENSATEG00000001273	xrn2	99	70.576	Anabas_testudineus
ENSMOCG00000012588	Xrn2	97	83.513	ENSAPLG00000013869	XRN2	99	83.944	Anas_platyrhynchos
ENSMOCG00000012588	Xrn2	100	80.021	ENSACAG00000005565	XRN2	100	79.503	Anolis_carolinensis
ENSMOCG00000012588	Xrn2	100	95.789	ENSANAG00000020126	XRN2	100	95.789	Aotus_nancymaae
ENSMOCG00000012588	Xrn2	90	73.642	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSMOCG00000012588	Xrn2	100	71.648	ENSAMXG00000018301	xrn2	100	71.443	Astyanax_mexicanus
ENSMOCG00000012588	Xrn2	100	94.217	ENSBTAG00000011304	XRN2	100	94.217	Bos_taurus
ENSMOCG00000012588	Xrn2	87	55.711	WBGene00006964	xrn-2	89	55.505	Caenorhabditis_elegans
ENSMOCG00000012588	Xrn2	100	95.895	ENSCJAG00000005611	XRN2	100	95.895	Callithrix_jacchus
ENSMOCG00000012588	Xrn2	100	95.895	ENSCAFG00000005185	XRN2	100	95.895	Canis_familiaris
ENSMOCG00000012588	Xrn2	100	95.895	ENSCAFG00020027479	XRN2	100	95.895	Canis_lupus_dingo
ENSMOCG00000012588	Xrn2	100	94.217	ENSCHIG00000006921	XRN2	100	94.217	Capra_hircus
ENSMOCG00000012588	Xrn2	100	95.053	ENSTSYG00000008315	XRN2	100	95.053	Carlito_syrichta
ENSMOCG00000012588	Xrn2	97	81.338	ENSCAPG00000010773	XRN2	99	81.230	Cavia_aperea
ENSMOCG00000012588	Xrn2	100	96.316	ENSCPOG00000009407	XRN2	100	96.316	Cavia_porcellus
ENSMOCG00000012588	Xrn2	100	96.316	ENSCATG00000040350	XRN2	100	96.316	Cercocebus_atys
ENSMOCG00000012588	Xrn2	100	96.316	ENSCLAG00000013419	XRN2	100	96.316	Chinchilla_lanigera
ENSMOCG00000012588	Xrn2	100	96.316	ENSCSAG00000011094	XRN2	100	96.316	Chlorocebus_sabaeus
ENSMOCG00000012588	Xrn2	68	98.387	ENSCHOG00000013404	XRN2	70	98.387	Choloepus_hoffmanni
ENSMOCG00000012588	Xrn2	100	83.958	ENSCPBG00000023533	XRN2	100	83.958	Chrysemys_picta_bellii
ENSMOCG00000012588	Xrn2	86	59.547	ENSCING00000022336	-	100	59.905	Ciona_intestinalis
ENSMOCG00000012588	Xrn2	98	54.211	ENSCSAVG00000011217	-	96	69.880	Ciona_savignyi
ENSMOCG00000012588	Xrn2	100	96.316	ENSCANG00000040240	XRN2	100	96.316	Colobus_angolensis_palliatus
ENSMOCG00000012588	Xrn2	98	97.847	ENSCGRG00001010676	Xrn2	99	97.847	Cricetulus_griseus_chok1gshd
ENSMOCG00000012588	Xrn2	97	96.980	ENSCGRG00000006378	Xrn2	99	96.980	Cricetulus_griseus_crigri
ENSMOCG00000012588	Xrn2	54	71.961	ENSCSEG00000005628	xrn2	100	71.765	Cynoglossus_semilaevis
ENSMOCG00000012588	Xrn2	89	72.299	ENSCVAG00000018999	xrn2	98	76.850	Cyprinodon_variegatus
ENSMOCG00000012588	Xrn2	100	69.918	ENSDARG00000101900	xrn2	96	77.820	Danio_rerio
ENSMOCG00000012588	Xrn2	100	95.263	ENSDNOG00000001895	XRN2	100	95.263	Dasypus_novemcinctus
ENSMOCG00000012588	Xrn2	100	93.368	ENSDORG00000005434	Xrn2	100	93.368	Dipodomys_ordii
ENSMOCG00000012588	Xrn2	87	56.130	FBgn0031868	Rat1	87	56.227	Drosophila_melanogaster
ENSMOCG00000012588	Xrn2	100	82.526	ENSETEG00000001740	XRN2	93	93.674	Echinops_telfairi
ENSMOCG00000012588	Xrn2	84	71.256	ENSEBUG00000016136	xrn2	100	71.135	Eptatretus_burgeri
ENSMOCG00000012588	Xrn2	100	96.000	ENSEASG00005002484	XRN2	100	96.000	Equus_asinus_asinus
ENSMOCG00000012588	Xrn2	99	96.093	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSMOCG00000012588	Xrn2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSMOCG00000012588	Xrn2	100	70.287	ENSELUG00000000552	xrn2	100	70.697	Esox_lucius
ENSMOCG00000012588	Xrn2	100	95.895	ENSFCAG00000007970	XRN2	100	95.895	Felis_catus
ENSMOCG00000012588	Xrn2	100	82.686	ENSFALG00000004508	XRN2	100	83.106	Ficedula_albicollis
ENSMOCG00000012588	Xrn2	100	96.000	ENSFDAG00000016311	XRN2	100	96.000	Fukomys_damarensis
ENSMOCG00000012588	Xrn2	54	69.962	ENSFHEG00000013039	xrn2	98	69.582	Fundulus_heteroclitus
ENSMOCG00000012588	Xrn2	86	73.147	ENSGMOG00000013436	xrn2	100	73.147	Gadus_morhua
ENSMOCG00000012588	Xrn2	100	83.019	ENSGALG00000008372	XRN2	100	82.914	Gallus_gallus
ENSMOCG00000012588	Xrn2	89	74.302	ENSGAFG00000014284	xrn2	98	74.070	Gambusia_affinis
ENSMOCG00000012588	Xrn2	87	75.000	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSMOCG00000012588	Xrn2	100	83.750	ENSGAGG00000004884	XRN2	100	83.750	Gopherus_agassizii
ENSMOCG00000012588	Xrn2	100	96.421	ENSGGOG00000013738	XRN2	100	96.421	Gorilla_gorilla
ENSMOCG00000012588	Xrn2	54	74.280	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSMOCG00000012588	Xrn2	100	95.263	ENSHGLG00000014831	XRN2	100	95.053	Heterocephalus_glaber_female
ENSMOCG00000012588	Xrn2	100	95.263	ENSHGLG00100013130	XRN2	100	95.053	Heterocephalus_glaber_male
ENSMOCG00000012588	Xrn2	99	68.278	ENSHCOG00000011994	xrn2	99	69.084	Hippocampus_comes
ENSMOCG00000012588	Xrn2	100	70.102	ENSIPUG00000006639	xrn2	100	70.102	Ictalurus_punctatus
ENSMOCG00000012588	Xrn2	100	96.316	ENSSTOG00000000589	XRN2	100	96.316	Ictidomys_tridecemlineatus
ENSMOCG00000012588	Xrn2	100	96.000	ENSJJAG00000022128	Xrn2	100	96.000	Jaculus_jaculus
ENSMOCG00000012588	Xrn2	54	79.688	ENSLBEG00000010041	xrn2	100	79.492	Labrus_bergylta
ENSMOCG00000012588	Xrn2	94	76.307	ENSLACG00000008307	XRN2	99	78.282	Latimeria_chalumnae
ENSMOCG00000012588	Xrn2	99	72.594	ENSLOCG00000016874	xrn2	100	72.594	Lepisosteus_oculatus
ENSMOCG00000012588	Xrn2	100	94.842	ENSLAFG00000014624	XRN2	100	94.842	Loxodonta_africana
ENSMOCG00000012588	Xrn2	100	96.316	ENSMFAG00000038122	XRN2	100	96.316	Macaca_fascicularis
ENSMOCG00000012588	Xrn2	100	96.316	ENSMMUG00000011405	XRN2	100	96.316	Macaca_mulatta
ENSMOCG00000012588	Xrn2	100	96.211	ENSMNEG00000040626	XRN2	100	96.211	Macaca_nemestrina
ENSMOCG00000012588	Xrn2	100	96.211	ENSMLEG00000041897	XRN2	100	96.211	Mandrillus_leucophaeus
ENSMOCG00000012588	Xrn2	95	73.035	ENSMAMG00000008633	xrn2	98	71.504	Mastacembelus_armatus
ENSMOCG00000012588	Xrn2	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSMOCG00000012588	Xrn2	99	81.335	ENSMGAG00000003196	XRN2	99	81.230	Meleagris_gallopavo
ENSMOCG00000012588	Xrn2	100	97.684	ENSMAUG00000021842	Xrn2	100	97.684	Mesocricetus_auratus
ENSMOCG00000012588	Xrn2	100	95.474	ENSMICG00000008126	XRN2	100	95.474	Microcebus_murinus
ENSMOCG00000012588	Xrn2	89	73.739	ENSMMOG00000017576	xrn2	96	74.621	Mola_mola
ENSMOCG00000012588	Xrn2	100	89.474	ENSMODG00000006163	XRN2	100	89.474	Monodelphis_domestica
ENSMOCG00000012588	Xrn2	91	72.697	ENSMALG00000011355	xrn2	99	72.697	Monopterus_albus
ENSMOCG00000012588	Xrn2	100	96.530	MGP_CAROLIEiJ_G0024400	Xrn2	100	96.530	Mus_caroli
ENSMOCG00000012588	Xrn2	100	96.740	ENSMUSG00000027433	Xrn2	100	96.740	Mus_musculus
ENSMOCG00000012588	Xrn2	100	96.530	MGP_PahariEiJ_G0025843	Xrn2	100	96.530	Mus_pahari
ENSMOCG00000012588	Xrn2	100	96.740	MGP_SPRETEiJ_G0025318	Xrn2	100	96.740	Mus_spretus
ENSMOCG00000012588	Xrn2	100	94.312	ENSMPUG00000001198	XRN2	93	94.312	Mustela_putorius_furo
ENSMOCG00000012588	Xrn2	100	95.684	ENSMLUG00000001536	XRN2	100	95.684	Myotis_lucifugus
ENSMOCG00000012588	Xrn2	100	96.737	ENSNGAG00000018138	Xrn2	100	96.737	Nannospalax_galili
ENSMOCG00000012588	Xrn2	90	76.157	ENSNBRG00000008062	xrn2	97	76.157	Neolamprologus_brichardi
ENSMOCG00000012588	Xrn2	100	96.211	ENSNLEG00000009991	XRN2	100	96.211	Nomascus_leucogenys
ENSMOCG00000012588	Xrn2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSMOCG00000012588	Xrn2	75	78.534	ENSOPRG00000001397	-	77	78.534	Ochotona_princeps
ENSMOCG00000012588	Xrn2	100	95.895	ENSODEG00000010745	-	100	95.895	Octodon_degus
ENSMOCG00000012588	Xrn2	98	86.731	ENSODEG00000000860	-	99	87.163	Octodon_degus
ENSMOCG00000012588	Xrn2	100	71.753	ENSONIG00000018720	xrn2	100	72.033	Oreochromis_niloticus
ENSMOCG00000012588	Xrn2	100	90.231	ENSOANG00000015673	XRN2	100	90.231	Ornithorhynchus_anatinus
ENSMOCG00000012588	Xrn2	100	96.105	ENSOCUG00000013468	XRN2	100	96.105	Oryctolagus_cuniculus
ENSMOCG00000012588	Xrn2	98	70.417	ENSORLG00000017213	xrn2	97	74.913	Oryzias_latipes
ENSMOCG00000012588	Xrn2	98	70.417	ENSORLG00020001824	xrn2	100	69.929	Oryzias_latipes_hni
ENSMOCG00000012588	Xrn2	98	70.208	ENSORLG00015019747	xrn2	100	69.725	Oryzias_latipes_hsok
ENSMOCG00000012588	Xrn2	98	68.247	ENSOMEG00000019820	xrn2	100	69.137	Oryzias_melastigma
ENSMOCG00000012588	Xrn2	100	95.689	ENSOGAG00000001068	XRN2	100	95.163	Otolemur_garnettii
ENSMOCG00000012588	Xrn2	97	94.060	ENSOARG00000004443	XRN2	100	94.060	Ovis_aries
ENSMOCG00000012588	Xrn2	100	96.421	ENSPPAG00000033549	XRN2	100	96.421	Pan_paniscus
ENSMOCG00000012588	Xrn2	100	95.895	ENSPPRG00000008732	XRN2	100	95.895	Panthera_pardus
ENSMOCG00000012588	Xrn2	97	95.784	ENSPTIG00000015683	XRN2	97	95.784	Panthera_tigris_altaica
ENSMOCG00000012588	Xrn2	100	96.421	ENSPTRG00000013308	XRN2	100	96.421	Pan_troglodytes
ENSMOCG00000012588	Xrn2	100	96.316	ENSPANG00000018088	XRN2	100	96.316	Papio_anubis
ENSMOCG00000012588	Xrn2	100	71.004	ENSPKIG00000016889	xrn2	100	70.902	Paramormyrops_kingsleyae
ENSMOCG00000012588	Xrn2	81	86.849	ENSPSIG00000014666	XRN2	100	86.198	Pelodiscus_sinensis
ENSMOCG00000012588	Xrn2	100	97.474	ENSPEMG00000000111	Xrn2	100	97.474	Peromyscus_maniculatus_bairdii
ENSMOCG00000012588	Xrn2	100	69.990	ENSPFOG00000004182	xrn2	99	70.613	Poecilia_formosa
ENSMOCG00000012588	Xrn2	89	74.884	ENSPLAG00000007351	xrn2	96	74.651	Poecilia_latipinna
ENSMOCG00000012588	Xrn2	94	68.743	ENSPMEG00000011798	xrn2	99	69.314	Poecilia_mexicana
ENSMOCG00000012588	Xrn2	89	74.884	ENSPREG00000012452	xrn2	99	73.064	Poecilia_reticulata
ENSMOCG00000012588	Xrn2	100	95.789	ENSPPYG00000010755	XRN2	100	95.789	Pongo_abelii
ENSMOCG00000012588	Xrn2	100	89.496	ENSPCAG00000011191	XRN2	100	89.496	Procavia_capensis
ENSMOCG00000012588	Xrn2	100	88.737	ENSPCOG00000016468	XRN2	100	88.737	Propithecus_coquereli
ENSMOCG00000012588	Xrn2	93	93.009	ENSPVAG00000004596	XRN2	93	93.009	Pteropus_vampyrus
ENSMOCG00000012588	Xrn2	90	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSMOCG00000012588	Xrn2	100	71.502	ENSPNAG00000010956	xrn2	99	71.399	Pygocentrus_nattereri
ENSMOCG00000012588	Xrn2	100	97.161	ENSRNOG00000011785	Xrn2	100	97.161	Rattus_norvegicus
ENSMOCG00000012588	Xrn2	86	96.699	ENSRBIG00000036193	XRN2	100	96.699	Rhinopithecus_bieti
ENSMOCG00000012588	Xrn2	100	96.316	ENSRROG00000044400	XRN2	90	96.316	Rhinopithecus_roxellana
ENSMOCG00000012588	Xrn2	64	55.556	YOR048C	RAT1	63	54.087	Saccharomyces_cerevisiae
ENSMOCG00000012588	Xrn2	100	96.105	ENSSBOG00000021014	XRN2	100	96.105	Saimiri_boliviensis_boliviensis
ENSMOCG00000012588	Xrn2	100	71.901	ENSSFOG00015001091	xrn2	100	71.798	Scleropages_formosus
ENSMOCG00000012588	Xrn2	92	73.506	ENSSMAG00000007834	xrn2	100	69.028	Scophthalmus_maximus
ENSMOCG00000012588	Xrn2	91	72.285	ENSSDUG00000012802	xrn2	99	72.624	Seriola_dumerili
ENSMOCG00000012588	Xrn2	93	74.350	ENSSLDG00000021273	xrn2	100	74.237	Seriola_lalandi_dorsalis
ENSMOCG00000012588	Xrn2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSMOCG00000012588	Xrn2	98	79.380	ENSSPUG00000005485	XRN2	96	78.846	Sphenodon_punctatus
ENSMOCG00000012588	Xrn2	100	70.612	ENSSPAG00000016027	xrn2	99	70.697	Stegastes_partitus
ENSMOCG00000012588	Xrn2	100	94.316	ENSSSCG00000007109	XRN2	100	94.316	Sus_scrofa
ENSMOCG00000012588	Xrn2	100	81.714	ENSTGUG00000007535	XRN2	100	81.609	Taeniopygia_guttata
ENSMOCG00000012588	Xrn2	100	68.182	ENSTRUG00000015489	xrn2	100	68.458	Takifugu_rubripes
ENSMOCG00000012588	Xrn2	100	71.651	ENSTNIG00000010712	xrn2	100	71.651	Tetraodon_nigroviridis
ENSMOCG00000012588	Xrn2	100	95.789	ENSTBEG00000004119	XRN2	100	95.789	Tupaia_belangeri
ENSMOCG00000012588	Xrn2	93	96.216	ENSTTRG00000009087	XRN2	93	96.216	Tursiops_truncatus
ENSMOCG00000012588	Xrn2	100	96.211	ENSUAMG00000024634	XRN2	100	96.211	Ursus_americanus
ENSMOCG00000012588	Xrn2	97	95.892	ENSUMAG00000004012	XRN2	95	95.892	Ursus_maritimus
ENSMOCG00000012588	Xrn2	89	88.876	ENSVPAG00000010694	XRN2	91	88.876	Vicugna_pacos
ENSMOCG00000012588	Xrn2	100	96.000	ENSVVUG00000012178	XRN2	100	96.000	Vulpes_vulpes
ENSMOCG00000012588	Xrn2	100	73.854	ENSXETG00000023501	xrn2	100	74.479	Xenopus_tropicalis
ENSMOCG00000012588	Xrn2	100	69.143	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus