EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000012613 (Gene tree)
Gene ID: 101993766
Gene Symbol: Urb1
Alias: 4921511H13Rik|5730405K23Rik
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 63505 bases
Position: chr2:98149975-98213479
Accession: 101993766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000012561	Npa1	PF11707.8	1.5e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016300	-	6765	XM_005345346	ENSMOCP00000012561	2254 (aa)	XP_005345403	-

Gene Model

Click here to download ENSMOCG00000012613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012613	Urb1	99	75.463	ENSG00000142207	URB1	99	75.419	Homo_sapiens
ENSMOCG00000012613	Urb1	99	41.947	ENSAPOG00000020308	urb1	99	42.034	Acanthochromis_polyacanthus
ENSMOCG00000012613	Urb1	99	72.795	ENSAMEG00000011998	URB1	99	72.795	Ailuropoda_melanoleuca
ENSMOCG00000012613	Urb1	96	43.907	ENSACIG00000003248	urb1	98	43.907	Amphilophus_citrinellus
ENSMOCG00000012613	Urb1	99	40.438	ENSAOCG00000010364	urb1	99	40.402	Amphiprion_ocellaris
ENSMOCG00000012613	Urb1	99	41.732	ENSAPEG00000010758	urb1	99	41.775	Amphiprion_percula
ENSMOCG00000012613	Urb1	98	43.248	ENSATEG00000011790	urb1	97	42.977	Anabas_testudineus
ENSMOCG00000012613	Urb1	97	53.950	ENSAPLG00000012791	URB1	99	53.995	Anas_platyrhynchos
ENSMOCG00000012613	Urb1	98	51.145	ENSACAG00000002817	URB1	99	50.830	Anolis_carolinensis
ENSMOCG00000012613	Urb1	99	74.473	ENSANAG00000024617	URB1	99	74.692	Aotus_nancymaae
ENSMOCG00000012613	Urb1	98	44.283	ENSACLG00000024865	urb1	99	43.799	Astatotilapia_calliptera
ENSMOCG00000012613	Urb1	99	39.125	ENSAMXG00000012306	urb1	100	38.899	Astyanax_mexicanus
ENSMOCG00000012613	Urb1	99	70.263	ENSBTAG00000012412	URB1	99	70.263	Bos_taurus
ENSMOCG00000012613	Urb1	99	74.144	ENSCJAG00000009118	URB1	99	74.362	Callithrix_jacchus
ENSMOCG00000012613	Urb1	99	73.166	ENSCAFG00000008892	URB1	99	73.166	Canis_familiaris
ENSMOCG00000012613	Urb1	99	72.127	ENSCAFG00020025994	-	99	72.127	Canis_lupus_dingo
ENSMOCG00000012613	Urb1	99	72.919	ENSCAFG00020025987	-	99	72.919	Canis_lupus_dingo
ENSMOCG00000012613	Urb1	99	70.263	ENSCHIG00000015645	URB1	99	70.263	Capra_hircus
ENSMOCG00000012613	Urb1	99	75.055	ENSTSYG00000013286	URB1	99	75.121	Carlito_syrichta
ENSMOCG00000012613	Urb1	98	72.904	ENSCAPG00000015589	URB1	99	72.904	Cavia_aperea
ENSMOCG00000012613	Urb1	99	73.765	ENSCPOG00000006748	URB1	99	73.765	Cavia_porcellus
ENSMOCG00000012613	Urb1	99	74.461	ENSCCAG00000021299	URB1	99	74.581	Cebus_capucinus
ENSMOCG00000012613	Urb1	99	74.714	ENSCATG00000042630	URB1	99	74.758	Cercocebus_atys
ENSMOCG00000012613	Urb1	99	74.857	ENSCLAG00000005262	URB1	99	74.857	Chinchilla_lanigera
ENSMOCG00000012613	Urb1	99	73.389	ENSCSAG00000009584	URB1	99	73.433	Chlorocebus_sabaeus
ENSMOCG00000012613	Urb1	99	55.988	ENSCPBG00000006454	URB1	99	55.988	Chrysemys_picta_bellii
ENSMOCG00000012613	Urb1	99	74.714	ENSCANG00000031088	URB1	99	74.758	Colobus_angolensis_palliatus
ENSMOCG00000012613	Urb1	98	87.941	ENSCGRG00001010616	Urb1	99	87.633	Cricetulus_griseus_chok1gshd
ENSMOCG00000012613	Urb1	98	87.387	ENSCGRG00000015840	Urb1	99	87.387	Cricetulus_griseus_crigri
ENSMOCG00000012613	Urb1	97	47.486	ENSCSEG00000012616	urb1	99	47.486	Cynoglossus_semilaevis
ENSMOCG00000012613	Urb1	96	51.190	ENSCVAG00000009076	urb1	98	51.190	Cyprinodon_variegatus
ENSMOCG00000012613	Urb1	99	42.838	ENSDARG00000060308	urb1	99	43.096	Danio_rerio
ENSMOCG00000012613	Urb1	85	72.958	ENSDNOG00000015586	URB1	99	72.958	Dasypus_novemcinctus
ENSMOCG00000012613	Urb1	99	74.438	ENSDORG00000006735	Urb1	99	74.438	Dipodomys_ordii
ENSMOCG00000012613	Urb1	92	75.636	ENSETEG00000009080	URB1	92	75.636	Echinops_telfairi
ENSMOCG00000012613	Urb1	99	73.160	ENSEASG00005007711	URB1	98	74.502	Equus_asinus_asinus
ENSMOCG00000012613	Urb1	96	82.434	ENSECAG00000013206	URB1	99	82.434	Equus_caballus
ENSMOCG00000012613	Urb1	58	81.328	ENSEEUG00000003626	-	55	81.328	Erinaceus_europaeus
ENSMOCG00000012613	Urb1	99	43.352	ENSELUG00000020516	urb1	99	43.396	Esox_lucius
ENSMOCG00000012613	Urb1	99	72.575	ENSFCAG00000002177	URB1	99	72.575	Felis_catus
ENSMOCG00000012613	Urb1	98	49.138	ENSFALG00000004636	URB1	99	49.204	Ficedula_albicollis
ENSMOCG00000012613	Urb1	99	73.965	ENSFDAG00000007288	URB1	95	73.680	Fukomys_damarensis
ENSMOCG00000012613	Urb1	99	40.734	ENSFHEG00000000202	urb1	99	41.750	Fundulus_heteroclitus
ENSMOCG00000012613	Urb1	92	46.194	ENSGMOG00000001838	urb1	93	46.194	Gadus_morhua
ENSMOCG00000012613	Urb1	99	54.014	ENSGALG00000015887	URB1	99	53.970	Gallus_gallus
ENSMOCG00000012613	Urb1	96	52.137	ENSGAFG00000020694	urb1	98	52.137	Gambusia_affinis
ENSMOCG00000012613	Urb1	99	43.594	ENSGACG00000011703	urb1	99	43.594	Gasterosteus_aculeatus
ENSMOCG00000012613	Urb1	99	55.352	ENSGAGG00000022544	URB1	99	55.352	Gopherus_agassizii
ENSMOCG00000012613	Urb1	99	75.297	ENSGGOG00000000285	URB1	99	75.374	Gorilla_gorilla
ENSMOCG00000012613	Urb1	98	44.081	ENSHBUG00000001904	urb1	99	43.600	Haplochromis_burtoni
ENSMOCG00000012613	Urb1	99	72.917	ENSHGLG00000004907	URB1	99	72.917	Heterocephalus_glaber_female
ENSMOCG00000012613	Urb1	99	73.351	ENSHGLG00100010749	URB1	99	73.351	Heterocephalus_glaber_male
ENSMOCG00000012613	Urb1	71	46.260	ENSHCOG00000018683	urb1	96	46.457	Hippocampus_comes
ENSMOCG00000012613	Urb1	99	39.440	ENSIPUG00000014721	urb1	99	39.390	Ictalurus_punctatus
ENSMOCG00000012613	Urb1	99	75.902	ENSSTOG00000004539	URB1	99	75.616	Ictidomys_tridecemlineatus
ENSMOCG00000012613	Urb1	99	41.344	ENSKMAG00000006001	urb1	99	47.040	Kryptolebias_marmoratus
ENSMOCG00000012613	Urb1	97	41.407	ENSLBEG00000027208	urb1	98	50.644	Labrus_bergylta
ENSMOCG00000012613	Urb1	98	46.769	ENSLACG00000017059	URB1	99	46.769	Latimeria_chalumnae
ENSMOCG00000012613	Urb1	99	44.129	ENSLOCG00000009190	urb1	99	44.075	Lepisosteus_oculatus
ENSMOCG00000012613	Urb1	99	71.078	ENSLAFG00000010407	URB1	99	71.078	Loxodonta_africana
ENSMOCG00000012613	Urb1	99	74.581	ENSMFAG00000034391	URB1	97	74.626	Macaca_fascicularis
ENSMOCG00000012613	Urb1	99	74.449	ENSMMUG00000010295	URB1	99	74.493	Macaca_mulatta
ENSMOCG00000012613	Urb1	99	73.316	ENSMNEG00000032981	URB1	99	73.360	Macaca_nemestrina
ENSMOCG00000012613	Urb1	99	74.758	ENSMLEG00000041435	URB1	99	74.802	Mandrillus_leucophaeus
ENSMOCG00000012613	Urb1	99	42.650	ENSMAMG00000011238	urb1	99	42.481	Mastacembelus_armatus
ENSMOCG00000012613	Urb1	98	41.637	ENSMZEG00005011862	urb1	99	41.202	Maylandia_zebra
ENSMOCG00000012613	Urb1	98	54.004	ENSMGAG00000014512	URB1	99	53.959	Meleagris_gallopavo
ENSMOCG00000012613	Urb1	92	84.311	ENSMAUG00000010516	Urb1	99	84.751	Mesocricetus_auratus
ENSMOCG00000012613	Urb1	99	74.063	ENSMICG00000016424	URB1	99	74.063	Microcebus_murinus
ENSMOCG00000012613	Urb1	99	60.738	ENSMODG00000021076	URB1	99	60.738	Monodelphis_domestica
ENSMOCG00000012613	Urb1	99	42.126	ENSMALG00000017411	urb1	99	51.505	Monopterus_albus
ENSMOCG00000012613	Urb1	99	84.897	MGP_CAROLIEiJ_G0020948	Urb1	99	84.897	Mus_caroli
ENSMOCG00000012613	Urb1	99	84.811	ENSMUSG00000039929	Urb1	100	84.811	Mus_musculus
ENSMOCG00000012613	Urb1	99	84.676	MGP_PahariEiJ_G0016653	Urb1	99	84.676	Mus_pahari
ENSMOCG00000012613	Urb1	99	84.592	MGP_SPRETEiJ_G0021854	Urb1	100	84.592	Mus_spretus
ENSMOCG00000012613	Urb1	99	71.529	ENSMPUG00000001123	URB1	99	71.529	Mustela_putorius_furo
ENSMOCG00000012613	Urb1	99	77.221	ENSNGAG00000001905	Urb1	99	77.221	Nannospalax_galili
ENSMOCG00000012613	Urb1	80	45.059	ENSNBRG00000001049	urb1	97	45.052	Neolamprologus_brichardi
ENSMOCG00000012613	Urb1	99	72.904	ENSNLEG00000026872	URB1	99	72.952	Nomascus_leucogenys
ENSMOCG00000012613	Urb1	95	57.216	ENSMEUG00000010828	URB1	96	57.216	Notamacropus_eugenii
ENSMOCG00000012613	Urb1	99	67.783	ENSOPRG00000013482	URB1	99	67.783	Ochotona_princeps
ENSMOCG00000012613	Urb1	99	73.184	ENSODEG00000002587	URB1	99	73.184	Octodon_degus
ENSMOCG00000012613	Urb1	99	44.192	ENSONIG00000005599	urb1	99	44.100	Oreochromis_niloticus
ENSMOCG00000012613	Urb1	99	73.072	ENSOCUG00000009381	URB1	99	73.072	Oryctolagus_cuniculus
ENSMOCG00000012613	Urb1	99	43.345	ENSORLG00000003429	urb1	99	43.214	Oryzias_latipes
ENSMOCG00000012613	Urb1	99	43.307	ENSORLG00020013785	urb1	99	43.288	Oryzias_latipes_hni
ENSMOCG00000012613	Urb1	95	46.304	ENSORLG00015019421	urb1	97	46.304	Oryzias_latipes_hsok
ENSMOCG00000012613	Urb1	76	50.118	ENSOMEG00000002094	urb1	97	50.118	Oryzias_melastigma
ENSMOCG00000012613	Urb1	99	74.348	ENSOGAG00000017140	URB1	99	74.348	Otolemur_garnettii
ENSMOCG00000012613	Urb1	96	71.973	ENSOARG00000013679	URB1	99	72.312	Ovis_aries
ENSMOCG00000012613	Urb1	99	75.605	ENSPPAG00000003423	URB1	99	75.683	Pan_paniscus
ENSMOCG00000012613	Urb1	99	72.948	ENSPPRG00000023131	URB1	99	72.948	Panthera_pardus
ENSMOCG00000012613	Urb1	91	72.376	ENSPTIG00000016125	URB1	97	72.376	Panthera_tigris_altaica
ENSMOCG00000012613	Urb1	99	75.517	ENSPTRG00000013852	URB1	99	75.595	Pan_troglodytes
ENSMOCG00000012613	Urb1	99	74.934	ENSPANG00000021964	URB1	99	74.978	Papio_anubis
ENSMOCG00000012613	Urb1	99	45.430	ENSPKIG00000003683	urb1	98	45.475	Paramormyrops_kingsleyae
ENSMOCG00000012613	Urb1	99	87.302	ENSPEMG00000021205	Urb1	99	87.302	Peromyscus_maniculatus_bairdii
ENSMOCG00000012613	Urb1	77	34.075	ENSPMAG00000009733	URB1	99	34.400	Petromyzon_marinus
ENSMOCG00000012613	Urb1	99	60.255	ENSPCIG00000016350	URB1	99	60.478	Phascolarctos_cinereus
ENSMOCG00000012613	Urb1	96	42.986	ENSPLAG00000004371	urb1	99	42.941	Poecilia_latipinna
ENSMOCG00000012613	Urb1	99	43.333	ENSPMEG00000006634	urb1	99	43.289	Poecilia_mexicana
ENSMOCG00000012613	Urb1	99	43.706	ENSPREG00000013453	urb1	99	43.662	Poecilia_reticulata
ENSMOCG00000012613	Urb1	99	74.658	ENSPPYG00000011359	URB1	99	74.537	Pongo_abelii
ENSMOCG00000012613	Urb1	99	62.818	ENSPCAG00000007430	URB1	99	63.126	Procavia_capensis
ENSMOCG00000012613	Urb1	99	75.199	ENSPCOG00000022695	URB1	99	75.243	Propithecus_coquereli
ENSMOCG00000012613	Urb1	99	72.563	ENSPVAG00000000889	URB1	99	72.563	Pteropus_vampyrus
ENSMOCG00000012613	Urb1	98	42.908	ENSPNYG00000010589	urb1	99	42.588	Pundamilia_nyererei
ENSMOCG00000012613	Urb1	99	38.690	ENSPNAG00000019324	urb1	99	38.988	Pygocentrus_nattereri
ENSMOCG00000012613	Urb1	99	84.734	ENSRNOG00000002080	Urb1	99	84.822	Rattus_norvegicus
ENSMOCG00000012613	Urb1	99	74.537	ENSRBIG00000033122	URB1	99	74.581	Rhinopithecus_bieti
ENSMOCG00000012613	Urb1	99	74.581	ENSRROG00000040237	URB1	99	74.626	Rhinopithecus_roxellana
ENSMOCG00000012613	Urb1	99	74.593	ENSSBOG00000027672	URB1	99	74.813	Saimiri_boliviensis_boliviensis
ENSMOCG00000012613	Urb1	99	59.991	ENSSHAG00000005140	URB1	100	59.912	Sarcophilus_harrisii
ENSMOCG00000012613	Urb1	90	45.823	ENSSFOG00015000339	urb1	97	45.678	Scleropages_formosus
ENSMOCG00000012613	Urb1	98	43.628	ENSSMAG00000003782	urb1	99	43.663	Scophthalmus_maximus
ENSMOCG00000012613	Urb1	99	44.212	ENSSDUG00000012313	urb1	99	44.082	Seriola_dumerili
ENSMOCG00000012613	Urb1	99	44.159	ENSSLDG00000023179	urb1	99	44.028	Seriola_lalandi_dorsalis
ENSMOCG00000012613	Urb1	99	52.719	ENSSPUG00000012447	URB1	99	52.719	Sphenodon_punctatus
ENSMOCG00000012613	Urb1	99	43.516	ENSSPAG00000006325	urb1	99	43.423	Stegastes_partitus
ENSMOCG00000012613	Urb1	99	71.743	ENSSSCG00000032024	URB1	99	71.743	Sus_scrofa
ENSMOCG00000012613	Urb1	74	56.930	ENSTGUG00000013442	URB1	100	56.930	Taeniopygia_guttata
ENSMOCG00000012613	Urb1	99	43.596	ENSTRUG00000009372	urb1	99	43.434	Takifugu_rubripes
ENSMOCG00000012613	Urb1	99	42.380	ENSTNIG00000016277	urb1	99	42.292	Tetraodon_nigroviridis
ENSMOCG00000012613	Urb1	80	72.046	ENSTBEG00000010044	URB1	81	72.046	Tupaia_belangeri
ENSMOCG00000012613	Urb1	90	75.079	ENSTTRG00000007712	URB1	92	75.079	Tursiops_truncatus
ENSMOCG00000012613	Urb1	99	72.487	ENSUAMG00000012231	URB1	99	72.487	Ursus_americanus
ENSMOCG00000012613	Urb1	91	74.551	ENSUMAG00000017419	URB1	96	74.699	Ursus_maritimus
ENSMOCG00000012613	Urb1	68	84.138	ENSVPAG00000001164	URB1	68	84.138	Vicugna_pacos
ENSMOCG00000012613	Urb1	99	73.107	ENSVVUG00000000551	URB1	99	73.107	Vulpes_vulpes
ENSMOCG00000012613	Urb1	99	47.196	ENSXETG00000009895	urb1	99	47.368	Xenopus_tropicalis
ENSMOCG00000012613	Urb1	99	40.757	ENSXCOG00000005500	urb1	96	45.223	Xiphophorus_couchianus
ENSMOCG00000012613	Urb1	99	40.837	ENSXMAG00000007253	urb1	96	45.247	Xiphophorus_maculatus