EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000012816 (Gene tree)
Gene ID: 101987913
Gene Symbol: Alkbh3
Alias: 1700108H04Rik|1810020C19Rik|Abh3|mABH3
Full Name: alkB homolog 3%2C alpha-ketoglutaratedependent dioxygenase
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 30897 bases
Position: chrJH996428.1:16599904-16630800
Accession: 101987913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000012843	2OG-FeII_Oxy_2	PF13532.6	3.8e-30	1	1
ENSMOCP00000012839	2OG-FeII_Oxy_2	PF13532.6	4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016582	-	873	-	ENSMOCP00000012839	290 (aa)	-	-
ENSMOCT00000016586	-	834	XM_005364119	ENSMOCP00000012843	278 (aa)	XP_005364176	-

Gene Model

Click here to download ENSMOCG00000012816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000012816	Alkbh3	68	40.206	ENSMOCG00000013405	Alkbh2	80	40.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012816	Alkbh3	99	84.965	ENSG00000166199	ALKBH3	99	84.965	Homo_sapiens
ENSMOCG00000012816	Alkbh3	99	55.052	ENSAPOG00000008495	alkbh3	95	55.052	Acanthochromis_polyacanthus
ENSMOCG00000012816	Alkbh3	99	79.225	ENSAMEG00000004842	ALKBH3	96	79.225	Ailuropoda_melanoleuca
ENSMOCG00000012816	Alkbh3	97	56.089	ENSACIG00000011887	alkbh3	100	56.089	Amphilophus_citrinellus
ENSMOCG00000012816	Alkbh3	99	54.355	ENSAOCG00000023500	alkbh3	95	54.355	Amphiprion_ocellaris
ENSMOCG00000012816	Alkbh3	99	54.355	ENSAPEG00000011723	alkbh3	95	54.355	Amphiprion_percula
ENSMOCG00000012816	Alkbh3	99	54.930	ENSATEG00000021785	alkbh3	95	54.930	Anabas_testudineus
ENSMOCG00000012816	Alkbh3	98	49.158	ENSACAG00000000855	ALKBH3	98	50.505	Anolis_carolinensis
ENSMOCG00000012816	Alkbh3	99	81.944	ENSANAG00000033941	ALKBH3	99	81.944	Aotus_nancymaae
ENSMOCG00000012816	Alkbh3	99	53.873	ENSACLG00000023226	alkbh3	96	53.873	Astatotilapia_calliptera
ENSMOCG00000012816	Alkbh3	97	60.000	ENSAMXG00000037076	alkbh3	98	60.000	Astyanax_mexicanus
ENSMOCG00000012816	Alkbh3	99	78.169	ENSBTAG00000009518	ALKBH3	99	78.169	Bos_taurus
ENSMOCG00000012816	Alkbh3	98	82.042	ENSCJAG00000011353	ALKBH3	100	82.042	Callithrix_jacchus
ENSMOCG00000012816	Alkbh3	99	78.671	ENSCAFG00000006657	ALKBH3	99	78.671	Canis_familiaris
ENSMOCG00000012816	Alkbh3	99	79.021	ENSCAFG00020006841	ALKBH3	99	79.021	Canis_lupus_dingo
ENSMOCG00000012816	Alkbh3	99	78.169	ENSCHIG00000017579	ALKBH3	99	78.169	Capra_hircus
ENSMOCG00000012816	Alkbh3	98	81.979	ENSTSYG00000005498	ALKBH3	99	81.979	Carlito_syrichta
ENSMOCG00000012816	Alkbh3	99	78.322	ENSCAPG00000004995	ALKBH3	100	78.322	Cavia_aperea
ENSMOCG00000012816	Alkbh3	99	81.119	ENSCPOG00000005138	ALKBH3	100	81.469	Cavia_porcellus
ENSMOCG00000012816	Alkbh3	99	81.818	ENSCCAG00000036907	ALKBH3	99	81.818	Cebus_capucinus
ENSMOCG00000012816	Alkbh3	99	84.266	ENSCATG00000035646	ALKBH3	99	84.266	Cercocebus_atys
ENSMOCG00000012816	Alkbh3	99	80.070	ENSCLAG00000016579	ALKBH3	100	80.070	Chinchilla_lanigera
ENSMOCG00000012816	Alkbh3	99	83.509	ENSCSAG00000005539	ALKBH3	99	83.509	Chlorocebus_sabaeus
ENSMOCG00000012816	Alkbh3	99	79.167	ENSCHOG00000001407	ALKBH3	99	79.167	Choloepus_hoffmanni
ENSMOCG00000012816	Alkbh3	99	67.483	ENSCPBG00000012575	ALKBH3	99	67.483	Chrysemys_picta_bellii
ENSMOCG00000012816	Alkbh3	54	58.667	ENSCING00000007764	-	97	58.667	Ciona_intestinalis
ENSMOCG00000012816	Alkbh3	96	45.455	ENSCSAVG00000000783	-	98	45.455	Ciona_savignyi
ENSMOCG00000012816	Alkbh3	99	83.916	ENSCANG00000018698	ALKBH3	99	83.916	Colobus_angolensis_palliatus
ENSMOCG00000012816	Alkbh3	99	90.526	ENSCGRG00001014489	Alkbh3	99	90.526	Cricetulus_griseus_chok1gshd
ENSMOCG00000012816	Alkbh3	99	90.526	ENSCGRG00000017661	Alkbh3	99	90.526	Cricetulus_griseus_crigri
ENSMOCG00000012816	Alkbh3	99	53.710	ENSCSEG00000000814	alkbh3	95	53.710	Cynoglossus_semilaevis
ENSMOCG00000012816	Alkbh3	100	55.052	ENSCVAG00000009432	alkbh3	97	55.052	Cyprinodon_variegatus
ENSMOCG00000012816	Alkbh3	99	54.965	ENSDARG00000045606	alkbh3	99	54.965	Danio_rerio
ENSMOCG00000012816	Alkbh3	99	80.634	ENSDNOG00000036652	ALKBH3	99	80.634	Dasypus_novemcinctus
ENSMOCG00000012816	Alkbh3	99	83.158	ENSDORG00000000083	Alkbh3	99	83.158	Dipodomys_ordii
ENSMOCG00000012816	Alkbh3	100	79.443	ENSEASG00005014856	ALKBH3	98	79.861	Equus_asinus_asinus
ENSMOCG00000012816	Alkbh3	100	79.791	ENSECAG00000010673	ALKBH3	98	80.208	Equus_caballus
ENSMOCG00000012816	Alkbh3	53	85.859	ENSEEUG00000002183	ALKBH3	55	85.859	Erinaceus_europaeus
ENSMOCG00000012816	Alkbh3	97	49.097	ENSELUG00000003260	alkbh3	94	49.110	Esox_lucius
ENSMOCG00000012816	Alkbh3	99	80.282	ENSFCAG00000029461	ALKBH3	99	80.282	Felis_catus
ENSMOCG00000012816	Alkbh3	97	66.078	ENSFALG00000012361	ALKBH3	98	66.078	Ficedula_albicollis
ENSMOCG00000012816	Alkbh3	99	80.634	ENSFDAG00000012666	ALKBH3	99	80.634	Fukomys_damarensis
ENSMOCG00000012816	Alkbh3	100	55.401	ENSFHEG00000018735	alkbh3	97	55.401	Fundulus_heteroclitus
ENSMOCG00000012816	Alkbh3	99	52.797	ENSGMOG00000019146	alkbh3	96	52.797	Gadus_morhua
ENSMOCG00000012816	Alkbh3	92	69.767	ENSGALG00000041309	ALKBH3	66	69.767	Gallus_gallus
ENSMOCG00000012816	Alkbh3	99	53.169	ENSGAFG00000005814	alkbh3	95	53.169	Gambusia_affinis
ENSMOCG00000012816	Alkbh3	99	54.874	ENSGACG00000006950	alkbh3	99	54.874	Gasterosteus_aculeatus
ENSMOCG00000012816	Alkbh3	72	75.500	ENSGAGG00000013151	ALKBH3	99	75.500	Gopherus_agassizii
ENSMOCG00000012816	Alkbh3	99	84.615	ENSGGOG00000001931	ALKBH3	99	84.615	Gorilla_gorilla
ENSMOCG00000012816	Alkbh3	99	53.873	ENSHBUG00000008513	alkbh3	96	53.873	Haplochromis_burtoni
ENSMOCG00000012816	Alkbh3	99	81.338	ENSHGLG00000019437	ALKBH3	99	81.338	Heterocephalus_glaber_female
ENSMOCG00000012816	Alkbh3	99	73.592	ENSHGLG00100004468	ALKBH3	99	74.296	Heterocephalus_glaber_male
ENSMOCG00000012816	Alkbh3	98	57.091	ENSIPUG00000017036	alkbh3	98	57.091	Ictalurus_punctatus
ENSMOCG00000012816	Alkbh3	98	82.624	ENSSTOG00000006060	ALKBH3	100	82.918	Ictidomys_tridecemlineatus
ENSMOCG00000012816	Alkbh3	99	79.577	ENSJJAG00000018577	-	98	79.577	Jaculus_jaculus
ENSMOCG00000012816	Alkbh3	99	53.710	ENSKMAG00000006499	alkbh3	95	53.710	Kryptolebias_marmoratus
ENSMOCG00000012816	Alkbh3	100	53.169	ENSLBEG00000004226	alkbh3	97	53.169	Labrus_bergylta
ENSMOCG00000012816	Alkbh3	98	57.491	ENSLACG00000017208	ALKBH3	99	58.904	Latimeria_chalumnae
ENSMOCG00000012816	Alkbh3	98	55.396	ENSLOCG00000001237	alkbh3	100	55.396	Lepisosteus_oculatus
ENSMOCG00000012816	Alkbh3	99	81.754	ENSLAFG00000003441	ALKBH3	99	81.754	Loxodonta_africana
ENSMOCG00000012816	Alkbh3	99	83.916	ENSMFAG00000031334	ALKBH3	99	83.916	Macaca_fascicularis
ENSMOCG00000012816	Alkbh3	99	83.916	ENSMNEG00000042403	ALKBH3	99	83.916	Macaca_nemestrina
ENSMOCG00000012816	Alkbh3	99	83.916	ENSMLEG00000038324	ALKBH3	99	83.916	Mandrillus_leucophaeus
ENSMOCG00000012816	Alkbh3	99	55.282	ENSMAMG00000023051	alkbh3	95	55.282	Mastacembelus_armatus
ENSMOCG00000012816	Alkbh3	99	53.873	ENSMZEG00005011786	alkbh3	96	53.873	Maylandia_zebra
ENSMOCG00000012816	Alkbh3	80	66.964	ENSMGAG00000010479	ALKBH3	99	66.964	Meleagris_gallopavo
ENSMOCG00000012816	Alkbh3	99	89.474	ENSMAUG00000009317	Alkbh3	99	89.474	Mesocricetus_auratus
ENSMOCG00000012816	Alkbh3	99	84.155	ENSMICG00000014651	ALKBH3	99	84.155	Microcebus_murinus
ENSMOCG00000012816	Alkbh3	99	50.362	ENSMMOG00000020327	alkbh3	93	50.719	Mola_mola
ENSMOCG00000012816	Alkbh3	85	79.325	ENSMODG00000019863	-	96	79.325	Monodelphis_domestica
ENSMOCG00000012816	Alkbh3	99	54.930	ENSMALG00000017888	alkbh3	95	54.930	Monopterus_albus
ENSMOCG00000012816	Alkbh3	99	85.664	MGP_CAROLIEiJ_G0023995	Alkbh3	99	85.664	Mus_caroli
ENSMOCG00000012816	Alkbh3	99	86.713	ENSMUSG00000040174	Alkbh3	99	86.713	Mus_musculus
ENSMOCG00000012816	Alkbh3	99	86.014	MGP_PahariEiJ_G0025431	Alkbh3	99	86.014	Mus_pahari
ENSMOCG00000012816	Alkbh3	99	87.063	MGP_SPRETEiJ_G0024905	Alkbh3	99	87.063	Mus_spretus
ENSMOCG00000012816	Alkbh3	99	79.930	ENSMPUG00000006151	ALKBH3	99	79.930	Mustela_putorius_furo
ENSMOCG00000012816	Alkbh3	99	80.351	ENSMLUG00000029289	ALKBH3	99	80.351	Myotis_lucifugus
ENSMOCG00000012816	Alkbh3	99	84.806	ENSNGAG00000004591	Alkbh3	99	84.806	Nannospalax_galili
ENSMOCG00000012816	Alkbh3	100	50.526	ENSNBRG00000016311	alkbh3	97	50.526	Neolamprologus_brichardi
ENSMOCG00000012816	Alkbh3	99	83.916	ENSNLEG00000027521	ALKBH3	99	83.916	Nomascus_leucogenys
ENSMOCG00000012816	Alkbh3	76	80.476	ENSMEUG00000007604	ALKBH3	99	80.861	Notamacropus_eugenii
ENSMOCG00000012816	Alkbh3	99	80.986	ENSOPRG00000006771	ALKBH3	99	80.986	Ochotona_princeps
ENSMOCG00000012816	Alkbh3	99	82.517	ENSODEG00000017204	ALKBH3	99	82.867	Octodon_degus
ENSMOCG00000012816	Alkbh3	99	54.225	ENSONIG00000015605	alkbh3	97	54.035	Oreochromis_niloticus
ENSMOCG00000012816	Alkbh3	98	66.667	ENSOANG00000009208	ALKBH3	97	66.667	Ornithorhynchus_anatinus
ENSMOCG00000012816	Alkbh3	99	83.217	ENSOCUG00000016359	ALKBH3	99	83.217	Oryctolagus_cuniculus
ENSMOCG00000012816	Alkbh3	99	56.338	ENSORLG00000001437	alkbh3	95	56.338	Oryzias_latipes
ENSMOCG00000012816	Alkbh3	89	54.086	ENSORLG00020002409	alkbh3	96	54.086	Oryzias_latipes_hni
ENSMOCG00000012816	Alkbh3	99	56.338	ENSORLG00015016266	alkbh3	95	56.338	Oryzias_latipes_hsok
ENSMOCG00000012816	Alkbh3	99	55.789	ENSOMEG00000003835	alkbh3	95	55.789	Oryzias_melastigma
ENSMOCG00000012816	Alkbh3	99	85.211	ENSOGAG00000009107	ALKBH3	97	85.211	Otolemur_garnettii
ENSMOCG00000012816	Alkbh3	99	77.817	ENSOARG00000001123	ALKBH3	99	77.817	Ovis_aries
ENSMOCG00000012816	Alkbh3	99	84.965	ENSPPAG00000028729	ALKBH3	99	84.965	Pan_paniscus
ENSMOCG00000012816	Alkbh3	99	80.351	ENSPPRG00000005278	ALKBH3	99	80.351	Panthera_pardus
ENSMOCG00000012816	Alkbh3	99	78.596	ENSPTIG00000019393	ALKBH3	99	78.596	Panthera_tigris_altaica
ENSMOCG00000012816	Alkbh3	99	84.965	ENSPTRG00000003523	ALKBH3	99	84.965	Pan_troglodytes
ENSMOCG00000012816	Alkbh3	99	81.185	ENSPANG00000003104	ALKBH3	99	81.185	Papio_anubis
ENSMOCG00000012816	Alkbh3	98	54.804	ENSPKIG00000021815	alkbh3	98	52.107	Paramormyrops_kingsleyae
ENSMOCG00000012816	Alkbh3	79	65.236	ENSPSIG00000011933	ALKBH3	96	65.502	Pelodiscus_sinensis
ENSMOCG00000012816	Alkbh3	99	49.097	ENSPMGG00000008862	alkbh3	93	49.097	Periophthalmus_magnuspinnatus
ENSMOCG00000012816	Alkbh3	99	87.324	ENSPEMG00000019372	Alkbh3	99	87.719	Peromyscus_maniculatus_bairdii
ENSMOCG00000012816	Alkbh3	88	51.984	ENSPMAG00000001119	alkbh3	99	51.984	Petromyzon_marinus
ENSMOCG00000012816	Alkbh3	99	71.579	ENSPCIG00000021794	ALKBH3	97	71.579	Phascolarctos_cinereus
ENSMOCG00000012816	Alkbh3	99	52.817	ENSPFOG00000002705	alkbh3	95	52.817	Poecilia_formosa
ENSMOCG00000012816	Alkbh3	99	52.817	ENSPLAG00000002355	alkbh3	95	52.817	Poecilia_latipinna
ENSMOCG00000012816	Alkbh3	99	52.113	ENSPMEG00000004476	alkbh3	95	52.113	Poecilia_mexicana
ENSMOCG00000012816	Alkbh3	99	53.169	ENSPREG00000005505	alkbh3	90	53.169	Poecilia_reticulata
ENSMOCG00000012816	Alkbh3	99	81.882	ENSPPYG00000003342	ALKBH3	97	81.882	Pongo_abelii
ENSMOCG00000012816	Alkbh3	99	81.786	ENSPCAG00000002955	ALKBH3	99	81.786	Procavia_capensis
ENSMOCG00000012816	Alkbh3	99	85.614	ENSPCOG00000020139	ALKBH3	99	85.614	Propithecus_coquereli
ENSMOCG00000012816	Alkbh3	99	77.895	ENSPVAG00000011569	ALKBH3	99	77.895	Pteropus_vampyrus
ENSMOCG00000012816	Alkbh3	99	53.873	ENSPNYG00000010362	alkbh3	96	53.873	Pundamilia_nyererei
ENSMOCG00000012816	Alkbh3	98	58.974	ENSPNAG00000015943	alkbh3	95	58.974	Pygocentrus_nattereri
ENSMOCG00000012816	Alkbh3	99	85.764	ENSRNOG00000021678	Alkbh3	97	85.764	Rattus_norvegicus
ENSMOCG00000012816	Alkbh3	99	83.566	ENSRBIG00000034161	ALKBH3	99	83.566	Rhinopithecus_bieti
ENSMOCG00000012816	Alkbh3	99	83.566	ENSRROG00000042173	ALKBH3	99	83.566	Rhinopithecus_roxellana
ENSMOCG00000012816	Alkbh3	99	81.597	ENSSBOG00000023947	ALKBH3	99	81.597	Saimiri_boliviensis_boliviensis
ENSMOCG00000012816	Alkbh3	99	71.579	ENSSHAG00000006189	ALKBH3	98	71.579	Sarcophilus_harrisii
ENSMOCG00000012816	Alkbh3	98	55.714	ENSSFOG00015003566	alkbh3	98	55.714	Scleropages_formosus
ENSMOCG00000012816	Alkbh3	99	53.472	ENSSMAG00000004404	alkbh3	95	53.472	Scophthalmus_maximus
ENSMOCG00000012816	Alkbh3	99	53.873	ENSSDUG00000000513	alkbh3	95	53.873	Seriola_dumerili
ENSMOCG00000012816	Alkbh3	99	53.873	ENSSLDG00000003080	alkbh3	95	53.873	Seriola_lalandi_dorsalis
ENSMOCG00000012816	Alkbh3	99	66.551	ENSSPUG00000005861	ALKBH3	99	66.551	Sphenodon_punctatus
ENSMOCG00000012816	Alkbh3	99	54.828	ENSSPAG00000020713	alkbh3	94	54.828	Stegastes_partitus
ENSMOCG00000012816	Alkbh3	99	81.338	ENSSSCG00000040937	ALKBH3	99	81.338	Sus_scrofa
ENSMOCG00000012816	Alkbh3	87	68.163	ENSTGUG00000010222	ALKBH3	99	68.163	Taeniopygia_guttata
ENSMOCG00000012816	Alkbh3	100	51.220	ENSTRUG00000021459	alkbh3	87	51.220	Takifugu_rubripes
ENSMOCG00000012816	Alkbh3	100	54.965	ENSTNIG00000010385	alkbh3	97	54.965	Tetraodon_nigroviridis
ENSMOCG00000012816	Alkbh3	99	80.634	ENSTBEG00000016697	ALKBH3	99	80.634	Tupaia_belangeri
ENSMOCG00000012816	Alkbh3	98	78.947	ENSTTRG00000005121	ALKBH3	99	78.947	Tursiops_truncatus
ENSMOCG00000012816	Alkbh3	99	76.761	ENSUAMG00000025129	ALKBH3	98	85.000	Ursus_americanus
ENSMOCG00000012816	Alkbh3	99	79.225	ENSUMAG00000015602	ALKBH3	99	79.225	Ursus_maritimus
ENSMOCG00000012816	Alkbh3	99	80.702	ENSVPAG00000000215	ALKBH3	99	80.702	Vicugna_pacos
ENSMOCG00000012816	Alkbh3	99	78.671	ENSVVUG00000017283	ALKBH3	99	78.671	Vulpes_vulpes
ENSMOCG00000012816	Alkbh3	98	56.338	ENSXETG00000022230	alkbh3	99	56.338	Xenopus_tropicalis
ENSMOCG00000012816	Alkbh3	59	59.394	ENSXCOG00000000737	alkbh3	65	59.394	Xiphophorus_couchianus
ENSMOCG00000012816	Alkbh3	99	53.901	ENSXMAG00000013123	alkbh3	95	53.901	Xiphophorus_maculatus