EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000012920 (Gene tree)
Gene ID: 101991766
Gene Symbol: Polr1e
Alias: 53kDa|D030019D19Rik|Paf53|Praf1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 12782 bases
Position: chrLG5:40132613-40145394
Accession: 101991766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000012986	RNA_pol_I_A49	PF06870.12	9.5e-100	1	1
ENSMOCP00000012993	RNA_pol_I_A49	PF06870.12	2.3e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016729	-	1629	XM_005362120	ENSMOCP00000012986	434 (aa)	XP_005362177	UPI00038BD9CC
ENSMOCT00000016736	-	1395	-	ENSMOCP00000012993	464 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000012920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012920	Polr1e	96	80.383	ENSG00000137054	POLR1E	99	80.383	Homo_sapiens
ENSMOCG00000012920	Polr1e	95	41.205	ENSAPOG00000012452	polr1e	99	41.205	Acanthochromis_polyacanthus
ENSMOCG00000012920	Polr1e	97	76.972	ENSAMEG00000010193	POLR1E	98	76.972	Ailuropoda_melanoleuca
ENSMOCG00000012920	Polr1e	91	42.118	ENSACIG00000009884	polr1e	99	42.278	Amphilophus_citrinellus
ENSMOCG00000012920	Polr1e	94	43.689	ENSAOCG00000005665	polr1e	99	43.689	Amphiprion_ocellaris
ENSMOCG00000012920	Polr1e	94	43.447	ENSAPEG00000020581	polr1e	99	43.447	Amphiprion_percula
ENSMOCG00000012920	Polr1e	94	44.499	ENSATEG00000020609	polr1e	98	44.499	Anabas_testudineus
ENSMOCG00000012920	Polr1e	79	56.693	ENSAPLG00000010340	POLR1E	100	56.693	Anas_platyrhynchos
ENSMOCG00000012920	Polr1e	96	79.904	ENSANAG00000038046	POLR1E	99	79.904	Aotus_nancymaae
ENSMOCG00000012920	Polr1e	97	42.417	ENSACLG00000013685	polr1e	100	42.417	Astatotilapia_calliptera
ENSMOCG00000012920	Polr1e	94	41.262	ENSAMXG00000018181	polr1e	98	41.262	Astyanax_mexicanus
ENSMOCG00000012920	Polr1e	96	82.057	ENSBTAG00000012243	POLR1E	99	82.057	Bos_taurus
ENSMOCG00000012920	Polr1e	91	74.555	ENSCJAG00000010512	POLR1E	93	78.342	Callithrix_jacchus
ENSMOCG00000012920	Polr1e	96	82.057	ENSCAFG00000002377	POLR1E	99	82.057	Canis_familiaris
ENSMOCG00000012920	Polr1e	96	82.297	ENSCAFG00020017851	POLR1E	99	82.297	Canis_lupus_dingo
ENSMOCG00000012920	Polr1e	96	80.861	ENSCHIG00000019479	POLR1E	99	80.861	Capra_hircus
ENSMOCG00000012920	Polr1e	96	81.340	ENSTSYG00000002075	POLR1E	99	81.340	Carlito_syrichta
ENSMOCG00000012920	Polr1e	66	85.417	ENSCAPG00000015653	POLR1E	99	85.417	Cavia_aperea
ENSMOCG00000012920	Polr1e	96	84.928	ENSCPOG00000009965	POLR1E	100	84.928	Cavia_porcellus
ENSMOCG00000012920	Polr1e	96	72.488	ENSCCAG00000029460	POLR1E	99	77.647	Cebus_capucinus
ENSMOCG00000012920	Polr1e	96	81.100	ENSCATG00000031732	POLR1E	99	81.739	Cercocebus_atys
ENSMOCG00000012920	Polr1e	86	83.646	ENSCLAG00000012701	POLR1E	98	83.646	Chinchilla_lanigera
ENSMOCG00000012920	Polr1e	96	80.622	ENSCSAG00000010782	POLR1E	99	80.622	Chlorocebus_sabaeus
ENSMOCG00000012920	Polr1e	91	73.282	ENSCHOG00000013024	POLR1E	82	73.282	Choloepus_hoffmanni
ENSMOCG00000012920	Polr1e	94	66.098	ENSCPBG00000006923	POLR1E	99	66.585	Chrysemys_picta_bellii
ENSMOCG00000012920	Polr1e	96	80.144	ENSCANG00000036112	POLR1E	99	80.870	Colobus_angolensis_palliatus
ENSMOCG00000012920	Polr1e	100	91.935	ENSCGRG00001006197	Polr1e	100	91.935	Cricetulus_griseus_chok1gshd
ENSMOCG00000012920	Polr1e	100	91.475	ENSCGRG00000006430	Polr1e	100	91.475	Cricetulus_griseus_crigri
ENSMOCG00000012920	Polr1e	94	41.320	ENSCSEG00000005121	polr1e	99	41.320	Cynoglossus_semilaevis
ENSMOCG00000012920	Polr1e	94	39.903	ENSCVAG00000019759	polr1e	98	39.903	Cyprinodon_variegatus
ENSMOCG00000012920	Polr1e	91	43.577	ENSDARG00000006434	polr1e	99	43.099	Danio_rerio
ENSMOCG00000012920	Polr1e	97	73.233	ENSDNOG00000010257	POLR1E	99	73.233	Dasypus_novemcinctus
ENSMOCG00000012920	Polr1e	82	76.901	ENSETEG00000018204	POLR1E	99	76.901	Echinops_telfairi
ENSMOCG00000012920	Polr1e	96	81.579	ENSEASG00005000675	POLR1E	99	81.579	Equus_asinus_asinus
ENSMOCG00000012920	Polr1e	96	81.340	ENSECAG00000014669	POLR1E	99	81.340	Equus_caballus
ENSMOCG00000012920	Polr1e	91	70.483	ENSEEUG00000011928	POLR1E	84	70.483	Erinaceus_europaeus
ENSMOCG00000012920	Polr1e	93	44.853	ENSELUG00000008150	polr1e	97	44.853	Esox_lucius
ENSMOCG00000012920	Polr1e	96	80.861	ENSFCAG00000013081	POLR1E	99	80.861	Felis_catus
ENSMOCG00000012920	Polr1e	91	59.391	ENSFALG00000012950	POLR1E	99	59.391	Ficedula_albicollis
ENSMOCG00000012920	Polr1e	96	83.014	ENSFDAG00000016917	POLR1E	100	83.014	Fukomys_damarensis
ENSMOCG00000012920	Polr1e	94	41.546	ENSFHEG00000009801	polr1e	99	41.546	Fundulus_heteroclitus
ENSMOCG00000012920	Polr1e	91	38.404	ENSGMOG00000003336	POLR1E	93	38.404	Gadus_morhua
ENSMOCG00000012920	Polr1e	95	61.071	ENSGALG00000005395	POLR1E	99	61.071	Gallus_gallus
ENSMOCG00000012920	Polr1e	94	41.565	ENSGAFG00000004850	polr1e	98	41.565	Gambusia_affinis
ENSMOCG00000012920	Polr1e	94	40.241	ENSGACG00000016087	polr1e	98	40.241	Gasterosteus_aculeatus
ENSMOCG00000012920	Polr1e	94	59.069	ENSGAGG00000001659	POLR1E	98	59.268	Gopherus_agassizii
ENSMOCG00000012920	Polr1e	96	80.144	ENSGGOG00000001882	POLR1E	99	83.333	Gorilla_gorilla
ENSMOCG00000012920	Polr1e	97	42.891	ENSHBUG00000002559	polr1e	100	42.891	Haplochromis_burtoni
ENSMOCG00000012920	Polr1e	96	83.254	ENSHGLG00000002036	POLR1E	100	83.254	Heterocephalus_glaber_female
ENSMOCG00000012920	Polr1e	96	83.493	ENSHGLG00100012784	POLR1E	100	83.493	Heterocephalus_glaber_male
ENSMOCG00000012920	Polr1e	94	43.032	ENSHCOG00000002774	polr1e	98	43.415	Hippocampus_comes
ENSMOCG00000012920	Polr1e	94	41.990	ENSIPUG00000003019	polr1e	98	41.990	Ictalurus_punctatus
ENSMOCG00000012920	Polr1e	96	81.340	ENSSTOG00000009810	POLR1E	99	81.340	Ictidomys_tridecemlineatus
ENSMOCG00000012920	Polr1e	99	82.679	ENSJJAG00000020731	Polr1e	99	82.679	Jaculus_jaculus
ENSMOCG00000012920	Polr1e	94	40.678	ENSKMAG00000000046	polr1e	99	40.678	Kryptolebias_marmoratus
ENSMOCG00000012920	Polr1e	96	43.914	ENSLBEG00000003104	polr1e	99	44.019	Labrus_bergylta
ENSMOCG00000012920	Polr1e	82	60.942	ENSLACG00000003416	POLR1E	99	60.942	Latimeria_chalumnae
ENSMOCG00000012920	Polr1e	96	49.161	ENSLOCG00000012859	polr1e	99	49.161	Lepisosteus_oculatus
ENSMOCG00000012920	Polr1e	97	80.952	ENSLAFG00000012831	POLR1E	99	80.952	Loxodonta_africana
ENSMOCG00000012920	Polr1e	98	80.706	ENSMFAG00000045465	POLR1E	99	81.739	Macaca_fascicularis
ENSMOCG00000012920	Polr1e	96	81.100	ENSMMUG00000017892	POLR1E	99	81.739	Macaca_mulatta
ENSMOCG00000012920	Polr1e	96	74.766	ENSMNEG00000040283	POLR1E	99	82.667	Macaca_nemestrina
ENSMOCG00000012920	Polr1e	96	81.100	ENSMLEG00000031135	POLR1E	99	81.739	Mandrillus_leucophaeus
ENSMOCG00000012920	Polr1e	96	41.943	ENSMAMG00000001260	polr1e	99	41.943	Mastacembelus_armatus
ENSMOCG00000012920	Polr1e	97	42.654	ENSMZEG00005021536	polr1e	100	42.654	Maylandia_zebra
ENSMOCG00000012920	Polr1e	99	91.455	ENSMAUG00000021044	Polr1e	99	91.455	Mesocricetus_auratus
ENSMOCG00000012920	Polr1e	96	80.622	ENSMICG00000003673	POLR1E	99	80.622	Microcebus_murinus
ENSMOCG00000012920	Polr1e	94	42.995	ENSMMOG00000007391	polr1e	98	42.995	Mola_mola
ENSMOCG00000012920	Polr1e	91	70.202	ENSMODG00000002884	POLR1E	97	70.202	Monodelphis_domestica
ENSMOCG00000012920	Polr1e	97	42.254	ENSMALG00000002665	polr1e	100	42.254	Monopterus_albus
ENSMOCG00000012920	Polr1e	100	85.023	MGP_CAROLIEiJ_G0025967	Polr1e	100	85.023	Mus_caroli
ENSMOCG00000012920	Polr1e	100	86.175	ENSMUSG00000028318	Polr1e	100	86.175	Mus_musculus
ENSMOCG00000012920	Polr1e	99	86.605	MGP_PahariEiJ_G0024114	Polr1e	97	88.804	Mus_pahari
ENSMOCG00000012920	Polr1e	100	85.945	MGP_SPRETEiJ_G0026930	Polr1e	100	85.945	Mus_spretus
ENSMOCG00000012920	Polr1e	97	75.319	ENSMPUG00000006040	POLR1E	99	75.319	Mustela_putorius_furo
ENSMOCG00000012920	Polr1e	97	78.571	ENSMLUG00000012688	POLR1E	97	78.571	Myotis_lucifugus
ENSMOCG00000012920	Polr1e	99	85.219	ENSNGAG00000002520	Polr1e	99	85.219	Nannospalax_galili
ENSMOCG00000012920	Polr1e	94	43.447	ENSNBRG00000016822	polr1e	98	43.447	Neolamprologus_brichardi
ENSMOCG00000012920	Polr1e	96	79.904	ENSNLEG00000003616	POLR1E	99	83.333	Nomascus_leucogenys
ENSMOCG00000012920	Polr1e	72	75.000	ENSMEUG00000015372	-	80	75.000	Notamacropus_eugenii
ENSMOCG00000012920	Polr1e	71	92.000	ENSOPRG00000014206	POLR1E	91	92.000	Ochotona_princeps
ENSMOCG00000012920	Polr1e	99	82.558	ENSODEG00000014565	POLR1E	100	82.558	Octodon_degus
ENSMOCG00000012920	Polr1e	98	42.792	ENSONIG00000008921	polr1e	100	43.128	Oreochromis_niloticus
ENSMOCG00000012920	Polr1e	96	79.665	ENSOCUG00000024773	POLR1E	99	79.665	Oryctolagus_cuniculus
ENSMOCG00000012920	Polr1e	94	41.646	ENSORLG00000005143	polr1e	99	41.646	Oryzias_latipes
ENSMOCG00000012920	Polr1e	89	41.237	ENSORLG00020007271	polr1e	99	41.237	Oryzias_latipes_hni
ENSMOCG00000012920	Polr1e	94	41.404	ENSORLG00015000137	polr1e	99	41.404	Oryzias_latipes_hsok
ENSMOCG00000012920	Polr1e	94	40.587	ENSOMEG00000013264	polr1e	96	40.587	Oryzias_melastigma
ENSMOCG00000012920	Polr1e	98	81.455	ENSOGAG00000012981	POLR1E	99	81.455	Otolemur_garnettii
ENSMOCG00000012920	Polr1e	99	79.167	ENSOARG00000011465	POLR1E	99	79.167	Ovis_aries
ENSMOCG00000012920	Polr1e	96	80.144	ENSPPAG00000034566	POLR1E	99	84.211	Pan_paniscus
ENSMOCG00000012920	Polr1e	96	81.100	ENSPPRG00000005649	POLR1E	99	81.100	Panthera_pardus
ENSMOCG00000012920	Polr1e	96	81.100	ENSPTIG00000009774	POLR1E	99	81.100	Panthera_tigris_altaica
ENSMOCG00000012920	Polr1e	96	80.144	ENSPTRG00000020944	POLR1E	99	84.211	Pan_troglodytes
ENSMOCG00000012920	Polr1e	96	81.100	ENSPANG00000025563	POLR1E	99	81.739	Papio_anubis
ENSMOCG00000012920	Polr1e	94	45.169	ENSPKIG00000003562	polr1e	98	45.169	Paramormyrops_kingsleyae
ENSMOCG00000012920	Polr1e	91	61.461	ENSPSIG00000003274	POLR1E	92	61.461	Pelodiscus_sinensis
ENSMOCG00000012920	Polr1e	91	42.000	ENSPMGG00000024169	polr1e	96	42.000	Periophthalmus_magnuspinnatus
ENSMOCG00000012920	Polr1e	100	74.713	ENSPEMG00000022300	-	100	74.713	Peromyscus_maniculatus_bairdii
ENSMOCG00000012920	Polr1e	100	91.014	ENSPEMG00000019151	-	100	91.014	Peromyscus_maniculatus_bairdii
ENSMOCG00000012920	Polr1e	91	70.455	ENSPCIG00000014798	POLR1E	97	70.455	Phascolarctos_cinereus
ENSMOCG00000012920	Polr1e	95	40.632	ENSPFOG00000019627	polr1e	98	40.632	Poecilia_formosa
ENSMOCG00000012920	Polr1e	94	41.505	ENSPLAG00000022679	polr1e	99	41.505	Poecilia_latipinna
ENSMOCG00000012920	Polr1e	84	40.153	ENSPMEG00000022123	polr1e	93	41.828	Poecilia_mexicana
ENSMOCG00000012920	Polr1e	94	41.320	ENSPREG00000009470	polr1e	98	41.320	Poecilia_reticulata
ENSMOCG00000012920	Polr1e	96	79.665	ENSPPYG00000019061	POLR1E	99	79.665	Pongo_abelii
ENSMOCG00000012920	Polr1e	54	80.508	ENSPCAG00000004891	POLR1E	77	80.851	Procavia_capensis
ENSMOCG00000012920	Polr1e	96	81.100	ENSPCOG00000027448	POLR1E	99	81.100	Propithecus_coquereli
ENSMOCG00000012920	Polr1e	91	84.224	ENSPVAG00000007940	POLR1E	83	84.224	Pteropus_vampyrus
ENSMOCG00000012920	Polr1e	97	42.654	ENSPNYG00000001032	polr1e	100	42.654	Pundamilia_nyererei
ENSMOCG00000012920	Polr1e	91	41.562	ENSPNAG00000006987	polr1e	95	41.562	Pygocentrus_nattereri
ENSMOCG00000012920	Polr1e	100	88.479	ENSRNOG00000012664	Polr1e	100	88.479	Rattus_norvegicus
ENSMOCG00000012920	Polr1e	93	80.446	ENSRBIG00000034214	POLR1E	99	81.579	Rhinopithecus_bieti
ENSMOCG00000012920	Polr1e	96	80.622	ENSRROG00000031986	POLR1E	99	80.870	Rhinopithecus_roxellana
ENSMOCG00000012920	Polr1e	96	78.947	ENSSBOG00000021415	POLR1E	99	78.947	Saimiri_boliviensis_boliviensis
ENSMOCG00000012920	Polr1e	83	68.889	ENSSHAG00000016084	POLR1E	100	68.889	Sarcophilus_harrisii
ENSMOCG00000012920	Polr1e	94	44.878	ENSSFOG00015002293	polr1e	98	44.878	Scleropages_formosus
ENSMOCG00000012920	Polr1e	99	45.183	ENSSMAG00000011672	polr1e	97	45.183	Scophthalmus_maximus
ENSMOCG00000012920	Polr1e	97	43.839	ENSSDUG00000022279	polr1e	100	43.839	Seriola_dumerili
ENSMOCG00000012920	Polr1e	97	43.365	ENSSLDG00000024918	polr1e	100	43.365	Seriola_lalandi_dorsalis
ENSMOCG00000012920	Polr1e	62	68.966	ENSSARG00000009810	-	67	68.966	Sorex_araneus
ENSMOCG00000012920	Polr1e	95	64.165	ENSSPUG00000009499	POLR1E	99	64.165	Sphenodon_punctatus
ENSMOCG00000012920	Polr1e	94	43.932	ENSSPAG00000021240	polr1e	99	43.932	Stegastes_partitus
ENSMOCG00000012920	Polr1e	97	82.100	ENSSSCG00000005347	POLR1E	100	82.100	Sus_scrofa
ENSMOCG00000012920	Polr1e	92	51.577	ENSTGUG00000007169	POLR1E	100	51.577	Taeniopygia_guttata
ENSMOCG00000012920	Polr1e	94	41.404	ENSTRUG00000020779	polr1e	99	41.732	Takifugu_rubripes
ENSMOCG00000012920	Polr1e	94	41.928	ENSTNIG00000017812	polr1e	98	42.233	Tetraodon_nigroviridis
ENSMOCG00000012920	Polr1e	97	78.622	ENSTBEG00000013786	POLR1E	88	78.622	Tupaia_belangeri
ENSMOCG00000012920	Polr1e	91	83.081	ENSTTRG00000008294	POLR1E	84	83.081	Tursiops_truncatus
ENSMOCG00000012920	Polr1e	96	82.536	ENSUAMG00000012474	POLR1E	100	83.379	Ursus_americanus
ENSMOCG00000012920	Polr1e	96	82.536	ENSUMAG00000011496	POLR1E	99	82.536	Ursus_maritimus
ENSMOCG00000012920	Polr1e	79	77.713	ENSVPAG00000009048	POLR1E	81	77.713	Vicugna_pacos
ENSMOCG00000012920	Polr1e	96	82.536	ENSVVUG00000019954	POLR1E	99	82.536	Vulpes_vulpes
ENSMOCG00000012920	Polr1e	94	49.637	ENSXETG00000006533	polr1e	99	49.637	Xenopus_tropicalis
ENSMOCG00000012920	Polr1e	94	41.809	ENSXCOG00000013706	polr1e	98	41.809	Xiphophorus_couchianus
ENSMOCG00000012920	Polr1e	94	42.298	ENSXMAG00000012484	polr1e	98	42.298	Xiphophorus_maculatus