EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000012950 (Gene tree)
Gene ID: 101993462
Gene Symbol: Rbm12
Alias: 5730420G12Rik|9430070C08Rik|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 18497 bases
Position: chrLG8:22087170-22105666
Accession: 101993462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000013020	RRM_1	PF00076.22	2.2e-29	1	3
ENSMOCP00000013020	RRM_1	PF00076.22	2.2e-29	2	3
ENSMOCP00000013020	RRM_1	PF00076.22	2.2e-29	3	3
ENSMOCP00000013017	RRM_1	PF00076.22	2.3e-29	1	3
ENSMOCP00000013017	RRM_1	PF00076.22	2.3e-29	2	3
ENSMOCP00000013017	RRM_1	PF00076.22	2.3e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016764	-	2982	-	ENSMOCP00000013020	993 (aa)	-	-
ENSMOCT00000016761	-	3975	XM_005363053	ENSMOCP00000013017	1000 (aa)	XP_005363110	UPI00038BFCE3

Gene Model

Click here to download ENSMOCG00000012950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000012950	Rbm12	57	69.767	ENSMOCG00000005603	-	69	70.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012950	Rbm12	100	92.776	ENSG00000244462	RBM12	100	97.203	Homo_sapiens
ENSMOCG00000012950	Rbm12	96	95.075	ENSAMEG00000019189	RBM12	100	80.000	Ailuropoda_melanoleuca
ENSMOCG00000012950	Rbm12	89	81.098	ENSACAG00000006330	RBM12	98	67.932	Anolis_carolinensis
ENSMOCG00000012950	Rbm12	100	92.725	ENSANAG00000032596	RBM12	98	80.040	Aotus_nancymaae
ENSMOCG00000012950	Rbm12	100	87.563	ENSBTAG00000044015	RBM12	100	87.688	Bos_taurus
ENSMOCG00000012950	Rbm12	89	96.018	ENSCAFG00000008256	RBM12	98	96.018	Canis_familiaris
ENSMOCG00000012950	Rbm12	89	95.751	ENSCAFG00020005650	RBM12	100	80.765	Canis_lupus_dingo
ENSMOCG00000012950	Rbm12	99	92.297	ENSCHIG00000024592	RBM12	100	78.706	Capra_hircus
ENSMOCG00000012950	Rbm12	96	93.440	ENSTSYG00000030563	RBM12	98	78.335	Carlito_syrichta
ENSMOCG00000012950	Rbm12	86	89.059	ENSCAPG00000006176	RBM12	96	89.151	Cavia_aperea
ENSMOCG00000012950	Rbm12	100	88.511	ENSCPOG00000035170	RBM12	100	88.811	Cavia_porcellus
ENSMOCG00000012950	Rbm12	96	90.318	ENSCCAG00000036056	-	98	84.503	Cebus_capucinus
ENSMOCG00000012950	Rbm12	88	88.830	ENSCCAG00000035899	-	100	88.525	Cebus_capucinus
ENSMOCG00000012950	Rbm12	100	92.351	ENSCATG00000030934	RBM12	98	80.020	Cercocebus_atys
ENSMOCG00000012950	Rbm12	100	92.514	ENSCLAG00000017230	RBM12	100	89.648	Chinchilla_lanigera
ENSMOCG00000012950	Rbm12	100	92.351	ENSCANG00000030552	RBM12	98	80.020	Colobus_angolensis_palliatus
ENSMOCG00000012950	Rbm12	100	95.075	ENSCGRG00001021144	Rbm12	100	95.477	Cricetulus_griseus_chok1gshd
ENSMOCG00000012950	Rbm12	100	95.075	ENSCGRG00000012719	Rbm12	100	95.477	Cricetulus_griseus_crigri
ENSMOCG00000012950	Rbm12	100	83.988	ENSDORG00000000606	-	100	83.988	Dipodomys_ordii
ENSMOCG00000012950	Rbm12	100	89.067	ENSDORG00000028509	-	100	89.368	Dipodomys_ordii
ENSMOCG00000012950	Rbm12	100	84.554	ENSECAG00000021997	RBM12	100	79.980	Equus_caballus
ENSMOCG00000012950	Rbm12	59	94.086	ENSEEUG00000008858	-	56	94.086	Erinaceus_europaeus
ENSMOCG00000012950	Rbm12	100	85.456	ENSFDAG00000014663	RBM12	100	79.719	Fukomys_damarensis
ENSMOCG00000012950	Rbm12	89	84.485	ENSGALG00000030253	RBM12	100	79.207	Gallus_gallus
ENSMOCG00000012950	Rbm12	100	92.493	ENSGGOG00000028500	RBM12	98	80.120	Gorilla_gorilla
ENSMOCG00000012950	Rbm12	99	93.723	ENSHGLG00000013208	RBM12	100	88.689	Heterocephalus_glaber_female
ENSMOCG00000012950	Rbm12	82	95.611	ENSHGLG00100019158	RBM12	88	95.611	Heterocephalus_glaber_male
ENSMOCG00000012950	Rbm12	100	86.908	ENSSTOG00000019739	RBM12	100	87.110	Ictidomys_tridecemlineatus
ENSMOCG00000012950	Rbm12	97	76.471	ENSJJAG00000009879	-	100	71.214	Jaculus_jaculus
ENSMOCG00000012950	Rbm12	99	92.970	ENSLAFG00000010341	RBM12	100	79.479	Loxodonta_africana
ENSMOCG00000012950	Rbm12	100	92.351	ENSMFAG00000032583	RBM12	98	79.761	Macaca_fascicularis
ENSMOCG00000012950	Rbm12	100	92.493	ENSMMUG00000020960	CPNE1	100	80.120	Macaca_mulatta
ENSMOCG00000012950	Rbm12	100	92.493	ENSMNEG00000045365	RBM12	98	80.120	Macaca_nemestrina
ENSMOCG00000012950	Rbm12	100	92.493	ENSMLEG00000032492	RBM12	98	80.120	Mandrillus_leucophaeus
ENSMOCG00000012950	Rbm12	89	84.793	ENSMGAG00000001502	RBM12	100	79.781	Meleagris_gallopavo
ENSMOCG00000012950	Rbm12	100	96.088	ENSMAUG00000012800	Rbm12	100	96.307	Mesocricetus_auratus
ENSMOCG00000012950	Rbm12	97	82.464	ENSMICG00000029540	-	73	67.589	Microcebus_murinus
ENSMOCG00000012950	Rbm12	95	94.537	ENSMICG00000032761	-	98	78.500	Microcebus_murinus
ENSMOCG00000012950	Rbm12	92	88.438	ENSMODG00000001591	RBM12	98	85.217	Monodelphis_domestica
ENSMOCG00000012950	Rbm12	100	94.240	MGP_CAROLIEiJ_G0024551	Rbm12	100	94.737	Mus_caroli
ENSMOCG00000012950	Rbm12	100	94.372	ENSMUSG00000089824	Rbm12	100	94.874	Mus_musculus
ENSMOCG00000012950	Rbm12	100	94.935	MGP_PahariEiJ_G0025996	Rbm12	100	95.432	Mus_pahari
ENSMOCG00000012950	Rbm12	100	93.613	MGP_SPRETEiJ_G0025473	Rbm12	100	95.110	Mus_spretus
ENSMOCG00000012950	Rbm12	99	92.539	ENSMPUG00000017789	-	100	85.757	Mustela_putorius_furo
ENSMOCG00000012950	Rbm12	100	92.493	ENSMLUG00000011217	RBM12	98	80.020	Myotis_lucifugus
ENSMOCG00000012950	Rbm12	100	93.367	ENSNGAG00000015846	Rbm12	100	93.769	Nannospalax_galili
ENSMOCG00000012950	Rbm12	100	92.493	ENSNLEG00000010268	RBM12	98	80.120	Nomascus_leucogenys
ENSMOCG00000012950	Rbm12	90	87.688	ENSMEUG00000007621	RBM12	74	85.652	Notamacropus_eugenii
ENSMOCG00000012950	Rbm12	100	85.055	ENSOPRG00000005687	RBM12	100	79.741	Ochotona_princeps
ENSMOCG00000012950	Rbm12	100	85.630	ENSODEG00000013870	RBM12	100	85.658	Octodon_degus
ENSMOCG00000012950	Rbm12	100	92.776	ENSPPAG00000040719	RBM12	98	80.321	Pan_paniscus
ENSMOCG00000012950	Rbm12	100	92.776	ENSPTRG00000040708	-	98	80.321	Pan_troglodytes
ENSMOCG00000012950	Rbm12	100	92.776	ENSPTRG00000013446	RBM12	98	80.321	Pan_troglodytes
ENSMOCG00000012950	Rbm12	100	92.493	ENSPANG00000020003	CPNE1	98	80.120	Papio_anubis
ENSMOCG00000012950	Rbm12	82	84.923	ENSPSIG00000007369	RBM12	98	84.923	Pelodiscus_sinensis
ENSMOCG00000012950	Rbm12	100	96.407	ENSPEMG00000017769	Rbm12	100	96.407	Peromyscus_maniculatus_bairdii
ENSMOCG00000012950	Rbm12	55	82.609	ENSPFOG00000023551	rbm12	96	67.391	Poecilia_formosa
ENSMOCG00000012950	Rbm12	100	92.635	ENSPPYG00000010960	RBM12	100	80.422	Pongo_abelii
ENSMOCG00000012950	Rbm12	100	83.920	ENSPCAG00000008653	RBM12	100	77.114	Procavia_capensis
ENSMOCG00000012950	Rbm12	99	93.534	ENSPCOG00000023724	RBM12	98	80.060	Propithecus_coquereli
ENSMOCG00000012950	Rbm12	100	84.453	ENSPVAG00000014937	RBM12	100	80.441	Pteropus_vampyrus
ENSMOCG00000012950	Rbm12	71	95.056	ENSRNOG00000019723	Rbm12	100	91.570	Rattus_norvegicus
ENSMOCG00000012950	Rbm12	71	95.056	ENSRNOG00000049913	LOC100910990	100	91.570	Rattus_norvegicus
ENSMOCG00000012950	Rbm12	100	92.351	ENSRBIG00000042965	RBM12	98	80.020	Rhinopithecus_bieti
ENSMOCG00000012950	Rbm12	100	92.351	ENSRROG00000037485	RBM12	98	80.020	Rhinopithecus_roxellana
ENSMOCG00000012950	Rbm12	100	92.351	ENSSBOG00000027633	RBM12	98	79.940	Saimiri_boliviensis_boliviensis
ENSMOCG00000012950	Rbm12	92	88.438	ENSSHAG00000018585	RBM12	100	85.652	Sarcophilus_harrisii
ENSMOCG00000012950	Rbm12	100	86.560	ENSSSCG00000036156	RBM12	100	80.639	Sus_scrofa
ENSMOCG00000012950	Rbm12	89	84.839	ENSTGUG00000003002	RBM12	100	84.604	Taeniopygia_guttata
ENSMOCG00000012950	Rbm12	100	85.456	ENSTTRG00000017035	RBM12	100	79.780	Tursiops_truncatus
ENSMOCG00000012950	Rbm12	94	94.651	ENSUAMG00000010430	RBM12	100	79.563	Ursus_americanus
ENSMOCG00000012950	Rbm12	88	100.000	ENSVPAG00000003812	RBM12	91	100.000	Vicugna_pacos
ENSMOCG00000012950	Rbm12	88	65.809	ENSXETG00000033541	RBM12	71	63.309	Xenopus_tropicalis