EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000012956 (Gene tree)
Gene ID: 101992369
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 26572 bases
Position: chr5:61079664-61106235
Accession: 101992369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000013034	KH_1	PF00013.29	2e-12	1	1
ENSMOCP00000013034	DEAD	PF00270.29	1.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016778	-	1947	XM_005347585	ENSMOCP00000013034	648 (aa)	XP_005347642	UPI00038C1536

Gene Model

Click here to download ENSMOCG00000012956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000012956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000012956	Ddx43	63	41.203	ENSMOCG00000018987	Ddx23	54	41.203
ENSMOCG00000012956	Ddx43	68	44.743	ENSMOCG00000012124	Ddx5	71	44.743
ENSMOCG00000012956	Ddx43	53	36.056	ENSMOCG00000018690	Ddx49	81	35.162
ENSMOCG00000012956	Ddx43	56	31.593	ENSMOCG00000021828	Eif4a2	88	32.099
ENSMOCG00000012956	Ddx43	56	34.853	ENSMOCG00000016551	Ddx59	59	34.853
ENSMOCG00000012956	Ddx43	50	36.012	ENSMOCG00000019953	-	53	35.694
ENSMOCG00000012956	Ddx43	55	32.597	ENSMOCG00000007064	Eif4a1	92	31.234
ENSMOCG00000012956	Ddx43	55	32.865	ENSMOCG00000002068	Ddx6	77	31.771
ENSMOCG00000012956	Ddx43	62	33.647	ENSMOCG00000009654	Ddx52	69	33.647
ENSMOCG00000012956	Ddx43	60	34.491	ENSMOCG00000020855	Ddx21	51	34.491
ENSMOCG00000012956	Ddx43	57	40.827	ENSMOCG00000014170	Ddx3x	61	39.753
ENSMOCG00000012956	Ddx43	58	36.554	ENSMOCG00000019594	Ddx27	50	36.554
ENSMOCG00000012956	Ddx43	64	36.941	ENSMOCG00000010015	Ddx41	66	36.941
ENSMOCG00000012956	Ddx43	60	39.506	ENSMOCG00000002596	D1Pas1	61	39.506
ENSMOCG00000012956	Ddx43	59	39.494	ENSMOCG00000013250	Ddx4	56	39.494
ENSMOCG00000012956	Ddx43	68	43.722	ENSMOCG00000010769	Ddx17	60	43.722
ENSMOCG00000012956	Ddx43	57	35.979	ENSMOCG00000003693	Ddx47	81	35.979
ENSMOCG00000012956	Ddx43	56	32.061	ENSMOCG00000009815	Ddx28	73	32.061
ENSMOCG00000012956	Ddx43	50	35.799	ENSMOCG00000013664	-	53	35.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000012956	Ddx43	100	80.982	ENSAMEG00000007851	-	100	80.828	Ailuropoda_melanoleuca
ENSMOCG00000012956	Ddx43	100	75.725	ENSBTAG00000021814	-	99	75.767	Bos_taurus
ENSMOCG00000012956	Ddx43	100	80.123	ENSCAFG00020010029	-	100	80.123	Canis_lupus_dingo
ENSMOCG00000012956	Ddx43	99	74.613	ENSCAFG00020002717	-	99	74.613	Canis_lupus_dingo
ENSMOCG00000012956	Ddx43	100	76.425	ENSCHIG00000017351	-	99	76.271	Capra_hircus
ENSMOCG00000012956	Ddx43	77	81.038	ENSCAPG00000004247	-	99	81.038	Cavia_aperea
ENSMOCG00000012956	Ddx43	100	83.821	ENSCPOG00000003991	-	100	83.667	Cavia_porcellus
ENSMOCG00000012956	Ddx43	100	76.923	ENSCLAG00000010261	-	100	76.615	Chinchilla_lanigera
ENSMOCG00000012956	Ddx43	60	78.698	ENSCHOG00000003450	-	69	78.698	Choloepus_hoffmanni
ENSMOCG00000012956	Ddx43	100	93.991	ENSCGRG00001001145	Ddx43	100	93.683	Cricetulus_griseus_chok1gshd
ENSMOCG00000012956	Ddx43	87	95.560	ENSCGRG00000010217	Ddx43	100	95.560	Cricetulus_griseus_crigri
ENSMOCG00000012956	Ddx43	100	80.982	ENSDNOG00000017589	-	99	80.982	Dasypus_novemcinctus
ENSMOCG00000012956	Ddx43	100	85.516	ENSDORG00000030010	Ddx43	100	85.846	Dipodomys_ordii
ENSMOCG00000012956	Ddx43	80	88.791	ENSETEG00000001887	-	81	88.791	Echinops_telfairi
ENSMOCG00000012956	Ddx43	100	81.385	ENSEASG00005004346	-	89	81.231	Equus_asinus_asinus
ENSMOCG00000012956	Ddx43	100	81.538	ENSECAG00000017971	DDX43	98	81.385	Equus_caballus
ENSMOCG00000012956	Ddx43	100	77.966	ENSFCAG00000031631	-	99	77.812	Felis_catus
ENSMOCG00000012956	Ddx43	87	86.323	ENSHGLG00000001118	-	100	86.323	Heterocephalus_glaber_female
ENSMOCG00000012956	Ddx43	92	84.087	ENSHGLG00100011895	-	99	80.650	Heterocephalus_glaber_male
ENSMOCG00000012956	Ddx43	87	80.462	ENSSTOG00000032538	-	100	80.462	Ictidomys_tridecemlineatus
ENSMOCG00000012956	Ddx43	100	88.136	ENSJJAG00000014184	Ddx43	100	88.154	Jaculus_jaculus
ENSMOCG00000012956	Ddx43	93	83.224	ENSLAFG00000012755	-	100	82.566	Loxodonta_africana
ENSMOCG00000012956	Ddx43	100	91.371	ENSMAUG00000001441	Ddx43	100	91.063	Mesocricetus_auratus
ENSMOCG00000012956	Ddx43	100	93.683	MGP_CAROLIEiJ_G0032467	Ddx43	100	93.837	Mus_caroli
ENSMOCG00000012956	Ddx43	100	94.299	ENSMUSG00000070291	Ddx43	100	94.453	Mus_musculus
ENSMOCG00000012956	Ddx43	100	81.231	MGP_PahariEiJ_G0015333	Ddx43	100	94.727	Mus_pahari
ENSMOCG00000012956	Ddx43	100	94.299	MGP_SPRETEiJ_G0033607	Ddx43	100	94.453	Mus_spretus
ENSMOCG00000012956	Ddx43	100	81.231	ENSMPUG00000004342	-	99	80.763	Mustela_putorius_furo
ENSMOCG00000012956	Ddx43	100	82.083	ENSMLUG00000017604	-	100	81.930	Myotis_lucifugus
ENSMOCG00000012956	Ddx43	100	90.755	ENSNGAG00000015102	Ddx43	100	91.217	Nannospalax_galili
ENSMOCG00000012956	Ddx43	67	86.607	ENSOPRG00000013523	-	76	86.607	Ochotona_princeps
ENSMOCG00000012956	Ddx43	84	84.162	ENSODEG00000016207	-	100	84.007	Octodon_degus
ENSMOCG00000012956	Ddx43	100	77.658	ENSOCUG00000006338	-	100	77.315	Oryctolagus_cuniculus
ENSMOCG00000012956	Ddx43	98	65.252	ENSOCUG00000025811	-	98	65.252	Oryctolagus_cuniculus
ENSMOCG00000012956	Ddx43	100	75.420	ENSOARG00000010873	-	99	75.809	Ovis_aries
ENSMOCG00000012956	Ddx43	100	78.274	ENSPTIG00000017842	-	99	78.120	Panthera_tigris_altaica
ENSMOCG00000012956	Ddx43	87	97.158	ENSPEMG00000023986	Ddx43	100	97.158	Peromyscus_maniculatus_bairdii
ENSMOCG00000012956	Ddx43	99	80.093	ENSPCAG00000005962	-	99	79.846	Procavia_capensis
ENSMOCG00000012956	Ddx43	87	87.766	ENSPVAG00000012718	-	99	87.766	Pteropus_vampyrus
ENSMOCG00000012956	Ddx43	100	94.299	ENSRNOG00000050868	Ddx43	100	94.453	Rattus_norvegicus
ENSMOCG00000012956	Ddx43	84	85.923	ENSSARG00000013493	-	99	85.923	Sorex_araneus
ENSMOCG00000012956	Ddx43	100	76.235	ENSSSCG00000004287	-	99	77.006	Sus_scrofa
ENSMOCG00000012956	Ddx43	87	73.890	ENSTTRG00000001488	-	99	73.890	Tursiops_truncatus
ENSMOCG00000012956	Ddx43	83	77.106	ENSUAMG00000012894	-	83	76.923	Ursus_americanus
ENSMOCG00000012956	Ddx43	100	80.769	ENSUMAG00000012291	-	99	80.615	Ursus_maritimus
ENSMOCG00000012956	Ddx43	94	72.340	ENSVPAG00000004969	-	100	72.340	Vicugna_pacos
ENSMOCG00000012956	Ddx43	100	79.815	ENSVVUG00000013908	-	100	79.815	Vulpes_vulpes