EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMOCG00000013019 (Gene tree)
Gene ID
101993697
Gene Symbol
Rpa1
Alias
5031405K23Rik|70kDa|RF-A|RP-A|Rpa
Full Name
replication protein A1
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Plus strand
Length
55443 bases
Position
chr7:23792503-23847945
Accession
101993697
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000013132tRNA_anti-codonPF01336.251.3e-1111
ENSMOCP00000013140tRNA_anti-codonPF01336.251.3e-1111
ENSMOCP00000013137tRNA_anti-codonPF01336.251.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000016884-1842-ENSMOCP00000013140613 (aa)--
ENSMOCT00000016876-2690XM_005349557ENSMOCP00000013132614 (aa)XP_005349614UPI00038C23F9
ENSMOCT00000016881-1911-ENSMOCP00000013137636 (aa)--
Gene Model
Click here to download ENSMOCG00000013019's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000013019's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000013019Rpa19359.737ENSAPOG00000019409RPA18659.737Acanthochromis_polyacanthus
ENSMOCG00000013019Rpa19962.069ENSAPOG00000011658rpa19962.295Acanthochromis_polyacanthus
ENSMOCG00000013019Rpa19987.624ENSAMEG00000007706RPA19887.624Ailuropoda_melanoleuca
ENSMOCG00000013019Rpa19558.262ENSACIG00000012881RPA19958.262Amphilophus_citrinellus
ENSMOCG00000013019Rpa19557.850ENSACIG00000007277rpa19957.850Amphilophus_citrinellus
ENSMOCG00000013019Rpa19962.993ENSAOCG00000023376rpa19963.605Amphiprion_ocellaris
ENSMOCG00000013019Rpa19952.824ENSAOCG00000009003RPA19953.621Amphiprion_ocellaris
ENSMOCG00000013019Rpa19952.782ENSAPEG00000019132RPA19952.711Amphiprion_percula
ENSMOCG00000013019Rpa19962.993ENSAPEG00000008634rpa19963.605Amphiprion_percula
ENSMOCG00000013019Rpa19954.224ENSATEG00000006443RPA19954.224Anabas_testudineus
ENSMOCG00000013019Rpa19563.793ENSATEG00000022024rpa19963.793Anabas_testudineus
ENSMOCG00000013019Rpa19864.106ENSAPLG00000012442RPA19964.106Anas_platyrhynchos
ENSMOCG00000013019Rpa19962.158ENSACAG00000014490RPA19962.843Anolis_carolinensis
ENSMOCG00000013019Rpa19887.667ENSANAG00000023456RPA19987.667Aotus_nancymaae
ENSMOCG00000013019Rpa19363.240ENSACLG00000006640rpa19963.240Astatotilapia_calliptera
ENSMOCG00000013019Rpa19957.571ENSACLG00000005223RPA19957.571Astatotilapia_calliptera
ENSMOCG00000013019Rpa19962.418ENSAMXG00000008418rpa19962.418Astyanax_mexicanus
ENSMOCG00000013019Rpa19988.254ENSBTAG00000009711RPA19988.254Bos_taurus
ENSMOCG00000013019Rpa17131.207WBGene00017546rpa-16631.207Caenorhabditis_elegans
ENSMOCG00000013019Rpa19987.113ENSCJAG00000001848RPA19987.113Callithrix_jacchus
ENSMOCG00000013019Rpa19988.254ENSCAFG00000019249RPA19988.254Canis_familiaris
ENSMOCG00000013019Rpa19988.254ENSCAFG00020009847RPA19988.254Canis_lupus_dingo
ENSMOCG00000013019Rpa19988.581ENSCHIG00000026308RPA19988.581Capra_hircus
ENSMOCG00000013019Rpa19987.948ENSTSYG00000003482-9987.948Carlito_syrichta
ENSMOCG00000013019Rpa19986.949ENSCPOG00000000035RPA19986.949Cavia_porcellus
ENSMOCG00000013019Rpa19976.786ENSCCAG00000010981RPA19976.786Cebus_capucinus
ENSMOCG00000013019Rpa19987.765ENSCLAG00000005185-9987.765Chinchilla_lanigera
ENSMOCG00000013019Rpa19984.176ENSCLAG00000015045-9984.176Chinchilla_lanigera
ENSMOCG00000013019Rpa19975.325ENSCSAG00000013833RPA19976.175Chlorocebus_sabaeus
ENSMOCG00000013019Rpa17189.679ENSCHOG00000009454-9989.679Choloepus_hoffmanni
ENSMOCG00000013019Rpa19584.957ENSCHOG00000013540-9984.957Choloepus_hoffmanni
ENSMOCG00000013019Rpa19976.835ENSCPBG00000020377RPA19977.465Chrysemys_picta_bellii
ENSMOCG00000013019Rpa19941.452ENSCING00000023482-9841.452Ciona_intestinalis
ENSMOCG00000013019Rpa19883.361ENSCANG00000030911RPA19983.361Colobus_angolensis_palliatus
ENSMOCG00000013019Rpa110093.053ENSCGRG00001008197Rpa110093.053Cricetulus_griseus_chok1gshd
ENSMOCG00000013019Rpa18292.913ENSCGRG00000000582Rpa19992.913Cricetulus_griseus_crigri
ENSMOCG00000013019Rpa19960.099ENSCSEG00000013066rpa19960.099Cynoglossus_semilaevis
ENSMOCG00000013019Rpa19949.921ENSCSEG00000012726RPA19851.630Cynoglossus_semilaevis
ENSMOCG00000013019Rpa19653.077ENSCVAG00000013446-9653.077Cyprinodon_variegatus
ENSMOCG00000013019Rpa19963.011ENSCVAG00000019431rpa19963.908Cyprinodon_variegatus
ENSMOCG00000013019Rpa19963.072ENSDARG00000003938rpa19963.072Danio_rerio
ENSMOCG00000013019Rpa19988.264ENSDNOG00000017218RPA19888.264Dasypus_novemcinctus
ENSMOCG00000013019Rpa19987.928ENSDORG00000006199Rpa19987.928Dipodomys_ordii
ENSMOCG00000013019Rpa19942.973FBgn0010173RpA-709843.780Drosophila_melanogaster
ENSMOCG00000013019Rpa18383.333ENSETEG00000017608RPA18283.333Echinops_telfairi
ENSMOCG00000013019Rpa19889.203ENSEASG00005009372RPA19893.750Equus_asinus_asinus
ENSMOCG00000013019Rpa19989.560ENSECAG00000023886RPA19989.560Equus_caballus
ENSMOCG00000013019Rpa16889.688ENSEEUG00000002186-6889.688Erinaceus_europaeus
ENSMOCG00000013019Rpa19961.564ENSELUG00000021071rpa19961.726Esox_lucius
ENSMOCG00000013019Rpa18856.354ENSELUG00000006136RPA19956.354Esox_lucius
ENSMOCG00000013019Rpa19988.436ENSFCAG00000006306RPA19988.436Felis_catus
ENSMOCG00000013019Rpa19974.188ENSFALG00000006575RPA19974.188Ficedula_albicollis
ENSMOCG00000013019Rpa19989.233ENSFDAG00000007720RPA19989.233Fukomys_damarensis
ENSMOCG00000013019Rpa19960.656ENSFHEG00000003580rpa19960.656Fundulus_heteroclitus
ENSMOCG00000013019Rpa19958.882ENSGMOG00000010382rpa19958.882Gadus_morhua
ENSMOCG00000013019Rpa19973.616ENSGALG00000003072RPA19973.616Gallus_gallus
ENSMOCG00000013019Rpa19962.109ENSGAFG00000012916rpa19962.109Gambusia_affinis
ENSMOCG00000013019Rpa19953.625ENSGAFG00000020953RPA19954.186Gambusia_affinis
ENSMOCG00000013019Rpa19960.884ENSGACG00000010856rpa19960.884Gasterosteus_aculeatus
ENSMOCG00000013019Rpa19976.835ENSGAGG00000013611RPA19976.835Gopherus_agassizii
ENSMOCG00000013019Rpa19984.339ENSGGOG00000014186RPA19984.339Gorilla_gorilla
ENSMOCG00000013019Rpa19963.054ENSHBUG00000017773rpa19963.054Haplochromis_burtoni
ENSMOCG00000013019Rpa19653.679ENSHBUG00000009348RPA19953.679Haplochromis_burtoni
ENSMOCG00000013019Rpa19988.581ENSHGLG00000008846RPA19988.581Heterocephalus_glaber_female
ENSMOCG00000013019Rpa19975.041ENSHGLG00100002005-9975.041Heterocephalus_glaber_male
ENSMOCG00000013019Rpa19982.545ENSHGLG00100000799-9982.545Heterocephalus_glaber_male
ENSMOCG00000013019Rpa19988.581ENSHGLG00100017755-9988.581Heterocephalus_glaber_male
ENSMOCG00000013019Rpa19958.497ENSHCOG00000001401rpa19958.814Hippocampus_comes
ENSMOCG00000013019Rpa19943.548ENSHCOG00000000351RPA19943.548Hippocampus_comes
ENSMOCG00000013019Rpa19962.276ENSIPUG00000004400rpa19962.276Ictalurus_punctatus
ENSMOCG00000013019Rpa19882.043ENSSTOG00000022475RPA19882.043Ictidomys_tridecemlineatus
ENSMOCG00000013019Rpa19591.111ENSJJAG00000000876Rpa19891.111Jaculus_jaculus
ENSMOCG00000013019Rpa19955.049ENSKMAG00000000234RPA19955.049Kryptolebias_marmoratus
ENSMOCG00000013019Rpa19959.738ENSKMAG00000005605rpa19960.556Kryptolebias_marmoratus
ENSMOCG00000013019Rpa19761.697ENSLBEG00000002281RPA18561.697Labrus_bergylta
ENSMOCG00000013019Rpa19962.336ENSLBEG00000021604rpa19962.336Labrus_bergylta
ENSMOCG00000013019Rpa18166.132ENSLACG00000007210RPA19966.132Latimeria_chalumnae
ENSMOCG00000013019Rpa19967.047ENSLOCG00000006397rpa19967.047Lepisosteus_oculatus
ENSMOCG00000013019Rpa19985.370ENSLAFG00000015354RPA19985.370Loxodonta_africana
ENSMOCG00000013019Rpa18287.525ENSMFAG00000036138-9988.538Macaca_fascicularis
ENSMOCG00000013019Rpa19979.445ENSMMUG00000002442-9979.445Macaca_mulatta
ENSMOCG00000013019Rpa19886.689ENSMMUG00000011604-9987.542Macaca_mulatta
ENSMOCG00000013019Rpa19983.524ENSMNEG00000031632-9886.860Macaca_nemestrina
ENSMOCG00000013019Rpa18884.000ENSMNEG00000029837-9984.000Macaca_nemestrina
ENSMOCG00000013019Rpa19880.763ENSMLEG00000038768-9981.623Mandrillus_leucophaeus
ENSMOCG00000013019Rpa19951.339ENSMAMG00000020097RPA19951.187Mastacembelus_armatus
ENSMOCG00000013019Rpa19962.397ENSMAMG00000017993rpa19962.397Mastacembelus_armatus
ENSMOCG00000013019Rpa19957.571ENSMZEG00005024731RPA19957.571Maylandia_zebra
ENSMOCG00000013019Rpa19963.054ENSMZEG00005007551rpa19963.054Maylandia_zebra
ENSMOCG00000013019Rpa19973.616ENSMGAG00000005315RPA19973.616Meleagris_gallopavo
ENSMOCG00000013019Rpa19895.008ENSMAUG00000010474Rpa110095.008Mesocricetus_auratus
ENSMOCG00000013019Rpa19988.254ENSMICG00000012867RPA19988.254Microcebus_murinus
ENSMOCG00000013019Rpa19962.069ENSMMOG00000014292rpa19963.220Mola_mola
ENSMOCG00000013019Rpa19755.444ENSMMOG00000010868RPA19759.009Mola_mola
ENSMOCG00000013019Rpa19983.361ENSMODG00000010549RPA19983.361Monodelphis_domestica
ENSMOCG00000013019Rpa19963.158ENSMALG00000011453rpa19963.322Monopterus_albus
ENSMOCG00000013019Rpa19461.009ENSMALG00000001208RPA18161.009Monopterus_albus
ENSMOCG00000013019Rpa110092.058MGP_CAROLIEiJ_G0016734Rpa110092.058Mus_caroli
ENSMOCG00000013019Rpa110089.567ENSMUSG00000000751Rpa110089.567Mus_musculus
ENSMOCG00000013019Rpa110092.903MGP_PahariEiJ_G0017871Rpa110092.903Mus_pahari
ENSMOCG00000013019Rpa110089.583MGP_SPRETEiJ_G0017577Rpa110089.583Mus_spretus
ENSMOCG00000013019Rpa19987.602ENSMPUG00000013119RPA19987.602Mustela_putorius_furo
ENSMOCG00000013019Rpa19986.246ENSMLUG00000006113RPA19986.246Myotis_lucifugus
ENSMOCG00000013019Rpa19989.145ENSNGAG00000004522Rpa19689.145Nannospalax_galili
ENSMOCG00000013019Rpa19463.040ENSNBRG00000020595rpa19963.040Neolamprologus_brichardi
ENSMOCG00000013019Rpa19755.853ENSNBRG00000009672RPA19655.853Neolamprologus_brichardi
ENSMOCG00000013019Rpa19985.971ENSNLEG00000017149RPA19986.482Nomascus_leucogenys
ENSMOCG00000013019Rpa19872.712ENSMEUG00000006714RPA19972.712Notamacropus_eugenii
ENSMOCG00000013019Rpa19983.762ENSODEG00000009038RPA19983.762Octodon_degus
ENSMOCG00000013019Rpa19963.005ENSONIG00000013135rpa19963.005Oreochromis_niloticus
ENSMOCG00000013019Rpa19882.196ENSOANG00000010880RPA19982.363Ornithorhynchus_anatinus
ENSMOCG00000013019Rpa19984.603ENSOCUG00000001504RPA19984.603Oryctolagus_cuniculus
ENSMOCG00000013019Rpa19963.218ENSORLG00000004856rpa19963.218Oryzias_latipes
ENSMOCG00000013019Rpa19953.049ENSORLG00000003368RPA19953.049Oryzias_latipes
ENSMOCG00000013019Rpa19952.096ENSORLG00020015284RPA19952.096Oryzias_latipes_hni
ENSMOCG00000013019Rpa19963.218ENSORLG00020008980rpa19963.218Oryzias_latipes_hni
ENSMOCG00000013019Rpa19963.218ENSORLG00015013982rpa19963.218Oryzias_latipes_hsok
ENSMOCG00000013019Rpa19953.882ENSORLG00015020383RPA19953.882Oryzias_latipes_hsok
ENSMOCG00000013019Rpa16761.614ENSORLG00015005867-9361.614Oryzias_latipes_hsok
ENSMOCG00000013019Rpa19961.576ENSOMEG00000004704rpa19961.576Oryzias_melastigma
ENSMOCG00000013019Rpa19556.261ENSOMEG00000011040RPA19956.261Oryzias_melastigma
ENSMOCG00000013019Rpa19484.669ENSOGAG00000029379-9989.247Otolemur_garnettii
ENSMOCG00000013019Rpa19987.928ENSOGAG00000005581-9987.928Otolemur_garnettii
ENSMOCG00000013019Rpa19988.581ENSOARG00000014479RPA19988.581Ovis_aries
ENSMOCG00000013019Rpa19987.276ENSPPAG00000039680RPA19987.785Pan_paniscus
ENSMOCG00000013019Rpa19988.436ENSPPRG00000011807RPA19988.436Panthera_pardus
ENSMOCG00000013019Rpa19988.111ENSPTIG00000007898RPA19988.111Panthera_tigris_altaica
ENSMOCG00000013019Rpa19987.113ENSPTRG00000008539RPA19987.622Pan_troglodytes
ENSMOCG00000013019Rpa19986.297ENSPANG00000024592RPA19987.134Papio_anubis
ENSMOCG00000013019Rpa19562.116ENSPKIG00000008053rpa19462.457Paramormyrops_kingsleyae
ENSMOCG00000013019Rpa19776.294ENSPSIG00000015617RPA19976.294Pelodiscus_sinensis
ENSMOCG00000013019Rpa19953.398ENSPMGG00000000543RPA19956.239Periophthalmus_magnuspinnatus
ENSMOCG00000013019Rpa19562.329ENSPMGG00000011589rpa19862.500Periophthalmus_magnuspinnatus
ENSMOCG00000013019Rpa110093.974ENSPEMG00000021061Rpa110093.974Peromyscus_maniculatus_bairdii
ENSMOCG00000013019Rpa19981.433ENSPCIG00000019049RPA19981.922Phascolarctos_cinereus
ENSMOCG00000013019Rpa19962.397ENSPFOG00000003987rpa19962.397Poecilia_formosa
ENSMOCG00000013019Rpa19962.664ENSPLAG00000004984rpa19962.664Poecilia_latipinna
ENSMOCG00000013019Rpa19553.686ENSPLAG00000008844-9753.686Poecilia_latipinna
ENSMOCG00000013019Rpa19553.291ENSPMEG00000003627-9753.859Poecilia_mexicana
ENSMOCG00000013019Rpa19962.562ENSPMEG00000020602rpa19963.445Poecilia_mexicana
ENSMOCG00000013019Rpa19951.846ENSPREG00000010119RPA110051.698Poecilia_reticulata
ENSMOCG00000013019Rpa19255.732ENSPREG00000010174rpa19555.732Poecilia_reticulata
ENSMOCG00000013019Rpa19988.418ENSPCOG00000001799RPA19988.418Propithecus_coquereli
ENSMOCG00000013019Rpa19987.602ENSPVAG00000002149RPA19987.602Pteropus_vampyrus
ENSMOCG00000013019Rpa19963.218ENSPNYG00000016316rpa19963.218Pundamilia_nyererei
ENSMOCG00000013019Rpa19957.256ENSPNYG00000024165RPA19957.256Pundamilia_nyererei
ENSMOCG00000013019Rpa19855.593ENSPNAG00000008599rpa19954.267Pygocentrus_nattereri
ENSMOCG00000013019Rpa110093.648ENSRNOG00000003123Rpa110093.648Rattus_norvegicus
ENSMOCG00000013019Rpa19985.668ENSRBIG00000036587RPA19985.668Rhinopithecus_bieti
ENSMOCG00000013019Rpa19980.619ENSRROG00000043278RPA19980.619Rhinopithecus_roxellana
ENSMOCG00000013019Rpa19832.577YAR007CRFA19832.577Saccharomyces_cerevisiae
ENSMOCG00000013019Rpa19883.028ENSSBOG00000030233RPA19787.097Saimiri_boliviensis_boliviensis
ENSMOCG00000013019Rpa19983.251ENSSHAG00000007969RPA19883.415Sarcophilus_harrisii
ENSMOCG00000013019Rpa19964.216ENSSFOG00015005362rpa19264.216Scleropages_formosus
ENSMOCG00000013019Rpa19951.589ENSSMAG00000019746RPA19951.657Scophthalmus_maximus
ENSMOCG00000013019Rpa19963.875ENSSDUG00000011949rpa19963.875Seriola_dumerili
ENSMOCG00000013019Rpa19064.037ENSSDUG00000016358RPA19263.761Seriola_dumerili
ENSMOCG00000013019Rpa19063.805ENSSLDG00000020784RPA19163.532Seriola_lalandi_dorsalis
ENSMOCG00000013019Rpa19964.204ENSSLDG00000011806rpa19964.204Seriola_lalandi_dorsalis
ENSMOCG00000013019Rpa19867.887ENSSARG00000007506RPA19967.887Sorex_araneus
ENSMOCG00000013019Rpa19772.896ENSSPUG00000007223RPA19872.896Sphenodon_punctatus
ENSMOCG00000013019Rpa19962.890ENSSPAG00000009903rpa19962.890Stegastes_partitus
ENSMOCG00000013019Rpa19656.355ENSSPAG00000011165RPA19756.610Stegastes_partitus
ENSMOCG00000013019Rpa19888.000ENSSSCG00000017822RPA19988.000Sus_scrofa
ENSMOCG00000013019Rpa19973.941ENSTGUG00000005775RPA19973.941Taeniopygia_guttata
ENSMOCG00000013019Rpa19962.951ENSTRUG00000003616rpa19962.951Takifugu_rubripes
ENSMOCG00000013019Rpa110053.626ENSTRUG00000000405RPA19853.817Takifugu_rubripes
ENSMOCG00000013019Rpa19964.321ENSTNIG00000016199rpa19964.379Tetraodon_nigroviridis
ENSMOCG00000013019Rpa18795.238ENSTBEG00000002709RPA18895.238Tupaia_belangeri
ENSMOCG00000013019Rpa19986.460ENSTTRG00000001169RPA19986.460Tursiops_truncatus
ENSMOCG00000013019Rpa19094.231ENSUAMG00000015676RPA19894.231Ursus_americanus
ENSMOCG00000013019Rpa19988.581ENSUMAG00000009328RPA19988.581Ursus_maritimus
ENSMOCG00000013019Rpa19986.786ENSVPAG00000009443RPA19986.786Vicugna_pacos
ENSMOCG00000013019Rpa19988.254ENSVVUG00000021715RPA19988.254Vulpes_vulpes
ENSMOCG00000013019Rpa19973.355ENSXETG00000013538rpa19874.220Xenopus_tropicalis
ENSMOCG00000013019Rpa19555.575ENSXCOG00000009899-9955.575Xiphophorus_couchianus
ENSMOCG00000013019Rpa19360.522ENSXCOG00000010068rpa19560.522Xiphophorus_couchianus
ENSMOCG00000013019Rpa19961.412ENSXMAG00000004102rpa19962.742Xiphophorus_maculatus
ENSMOCG00000013019Rpa19959.915ENSXMAG00000010333RPA18859.915Xiphophorus_maculatus

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