EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000013080 (Gene tree)
Gene ID: 101990336
Gene Symbol: Prpf38a
Alias: 2410002M20Rik
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 16006 bases
Position: chr10:75897796-75913801
Accession: 101990336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000013209	PRP38	PF03371.15	1.4e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000016953	-	2353	XM_005353550	ENSMOCP00000013209	312 (aa)	XP_005353607	UPI000228E53A

Gene Model

Click here to download ENSMOCG00000013080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000013080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000013080	Prpf38a	100	99.679	ENSG00000134748	PRPF38A	100	99.679	Homo_sapiens
ENSMOCG00000013080	Prpf38a	71	88.688	ENSAPOG00000011652	prpf38a	100	81.789	Acanthochromis_polyacanthus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSAMEG00000009319	PRPF38A	100	99.679	Ailuropoda_melanoleuca
ENSMOCG00000013080	Prpf38a	71	86.425	ENSACIG00000012292	prpf38a	76	85.714	Amphilophus_citrinellus
ENSMOCG00000013080	Prpf38a	71	88.688	ENSAOCG00000018004	prpf38a	100	81.789	Amphiprion_ocellaris
ENSMOCG00000013080	Prpf38a	71	88.688	ENSAPEG00000021414	prpf38a	100	81.789	Amphiprion_percula
ENSMOCG00000013080	Prpf38a	71	89.140	ENSATEG00000004608	prpf38a	100	81.789	Anabas_testudineus
ENSMOCG00000013080	Prpf38a	79	97.976	ENSAPLG00000005827	PRPF38A	99	97.976	Anas_platyrhynchos
ENSMOCG00000013080	Prpf38a	100	95.513	ENSACAG00000008249	PRPF38A	100	95.513	Anolis_carolinensis
ENSMOCG00000013080	Prpf38a	100	99.679	ENSANAG00000027839	PRPF38A	100	99.679	Aotus_nancymaae
ENSMOCG00000013080	Prpf38a	100	68.038	ENSANAG00000029204	-	100	62.658	Aotus_nancymaae
ENSMOCG00000013080	Prpf38a	71	86.425	ENSACLG00000021595	prpf38a	100	80.192	Astatotilapia_calliptera
ENSMOCG00000013080	Prpf38a	100	82.428	ENSAMXG00000029274	prpf38a	100	82.428	Astyanax_mexicanus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSBTAG00000002720	PRPF38A	100	99.679	Bos_taurus
ENSMOCG00000013080	Prpf38a	63	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCJAG00000021594	PRPF38A	100	99.679	Callithrix_jacchus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCAFG00000003740	PRPF38A	100	99.679	Canis_familiaris
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCAFG00020010939	PRPF38A	100	99.679	Canis_lupus_dingo
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCHIG00000024730	PRPF38A	100	99.679	Capra_hircus
ENSMOCG00000013080	Prpf38a	86	98.513	ENSTSYG00000031994	-	95	98.513	Carlito_syrichta
ENSMOCG00000013080	Prpf38a	100	99.679	ENSTSYG00000009868	-	100	99.679	Carlito_syrichta
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCPOG00000005079	PRPF38A	100	99.679	Cavia_porcellus
ENSMOCG00000013080	Prpf38a	100	99.359	ENSCCAG00000026502	PRPF38A	100	99.359	Cebus_capucinus
ENSMOCG00000013080	Prpf38a	100	64.103	ENSCATG00000044190	-	100	62.821	Cercocebus_atys
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCATG00000032296	PRPF38A	100	99.679	Cercocebus_atys
ENSMOCG00000013080	Prpf38a	100	99.679	ENSCLAG00000005816	PRPF38A	100	99.679	Chinchilla_lanigera
ENSMOCG00000013080	Prpf38a	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSMOCG00000013080	Prpf38a	100	98.397	ENSCPBG00000014791	PRPF38A	100	98.397	Chrysemys_picta_bellii
ENSMOCG00000013080	Prpf38a	67	71.429	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSMOCG00000013080	Prpf38a	96	99.666	ENSCANG00000032608	PRPF38A	100	99.666	Colobus_angolensis_palliatus
ENSMOCG00000013080	Prpf38a	74	85.281	ENSCGRG00001002557	-	78	85.281	Cricetulus_griseus_chok1gshd
ENSMOCG00000013080	Prpf38a	100	100.000	ENSCGRG00001018502	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSMOCG00000013080	Prpf38a	100	100.000	ENSCGRG00000014868	Prpf38a	100	100.000	Cricetulus_griseus_crigri
ENSMOCG00000013080	Prpf38a	71	87.783	ENSCSEG00000001269	prpf38a	79	87.013	Cynoglossus_semilaevis
ENSMOCG00000013080	Prpf38a	71	90.498	ENSCVAG00000012305	prpf38a	100	82.428	Cyprinodon_variegatus
ENSMOCG00000013080	Prpf38a	100	81.789	ENSDARG00000039213	prpf38a	100	81.789	Danio_rerio
ENSMOCG00000013080	Prpf38a	100	99.679	ENSDNOG00000042326	PRPF38A	100	99.679	Dasypus_novemcinctus
ENSMOCG00000013080	Prpf38a	84	83.270	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSMOCG00000013080	Prpf38a	84	83.270	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSMOCG00000013080	Prpf38a	100	86.218	ENSDORG00000023857	-	100	86.218	Dipodomys_ordii
ENSMOCG00000013080	Prpf38a	63	75.635	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSMOCG00000013080	Prpf38a	76	81.092	ENSEBUG00000012588	prpf38a	75	81.116	Eptatretus_burgeri
ENSMOCG00000013080	Prpf38a	100	99.679	ENSEASG00005014427	PRPF38A	100	99.679	Equus_asinus_asinus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSECAG00000022628	PRPF38A	100	99.679	Equus_caballus
ENSMOCG00000013080	Prpf38a	71	86.878	ENSELUG00000021094	prpf38a	100	80.511	Esox_lucius
ENSMOCG00000013080	Prpf38a	100	99.679	ENSFCAG00000002518	PRPF38A	100	99.679	Felis_catus
ENSMOCG00000013080	Prpf38a	99	84.887	ENSFALG00000003612	-	77	90.043	Ficedula_albicollis
ENSMOCG00000013080	Prpf38a	87	96.679	ENSFALG00000005598	-	100	96.679	Ficedula_albicollis
ENSMOCG00000013080	Prpf38a	100	99.359	ENSFDAG00000011287	PRPF38A	100	99.359	Fukomys_damarensis
ENSMOCG00000013080	Prpf38a	84	78.788	ENSFHEG00000014317	prpf38a	78	88.745	Fundulus_heteroclitus
ENSMOCG00000013080	Prpf38a	53	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSMOCG00000013080	Prpf38a	100	98.077	ENSGALG00000010627	PRPF38A	100	98.077	Gallus_gallus
ENSMOCG00000013080	Prpf38a	71	90.498	ENSGAFG00000012422	prpf38a	100	82.428	Gambusia_affinis
ENSMOCG00000013080	Prpf38a	71	86.099	ENSGACG00000005423	prpf38a	100	79.683	Gasterosteus_aculeatus
ENSMOCG00000013080	Prpf38a	100	98.718	ENSGAGG00000020547	PRPF38A	100	98.718	Gopherus_agassizii
ENSMOCG00000013080	Prpf38a	100	99.679	ENSGGOG00000003940	PRPF38A	100	99.679	Gorilla_gorilla
ENSMOCG00000013080	Prpf38a	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSMOCG00000013080	Prpf38a	100	83.333	ENSHGLG00000007918	-	100	83.013	Heterocephalus_glaber_female
ENSMOCG00000013080	Prpf38a	100	99.679	ENSHGLG00000000475	PRPF38A	100	99.679	Heterocephalus_glaber_female
ENSMOCG00000013080	Prpf38a	100	99.679	ENSHGLG00100008935	PRPF38A	100	99.679	Heterocephalus_glaber_male
ENSMOCG00000013080	Prpf38a	100	83.333	ENSHGLG00100003928	-	100	83.013	Heterocephalus_glaber_male
ENSMOCG00000013080	Prpf38a	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSMOCG00000013080	Prpf38a	74	87.500	ENSIPUG00000005757	prpf38a	75	87.500	Ictalurus_punctatus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSSTOG00000015610	PRPF38A	100	99.679	Ictidomys_tridecemlineatus
ENSMOCG00000013080	Prpf38a	100	99.038	ENSJJAG00000015811	Prpf38a	100	99.038	Jaculus_jaculus
ENSMOCG00000013080	Prpf38a	71	90.045	ENSKMAG00000006588	prpf38a	100	82.109	Kryptolebias_marmoratus
ENSMOCG00000013080	Prpf38a	96	79.195	ENSLBEG00000020585	prpf38a	100	79.553	Labrus_bergylta
ENSMOCG00000013080	Prpf38a	100	92.308	ENSLACG00000011495	PRPF38A	100	92.308	Latimeria_chalumnae
ENSMOCG00000013080	Prpf38a	100	80.192	ENSLOCG00000006262	prpf38a	100	81.470	Lepisosteus_oculatus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSLAFG00000025862	PRPF38A	100	99.679	Loxodonta_africana
ENSMOCG00000013080	Prpf38a	100	99.679	ENSMFAG00000039449	PRPF38A	100	99.679	Macaca_fascicularis
ENSMOCG00000013080	Prpf38a	87	98.897	ENSMMUG00000014333	PRPF38A	98	98.897	Macaca_mulatta
ENSMOCG00000013080	Prpf38a	100	99.679	ENSMNEG00000031221	PRPF38A	100	99.679	Macaca_nemestrina
ENSMOCG00000013080	Prpf38a	100	64.423	ENSMNEG00000040242	-	100	63.462	Macaca_nemestrina
ENSMOCG00000013080	Prpf38a	100	99.679	ENSMLEG00000041105	PRPF38A	100	99.679	Mandrillus_leucophaeus
ENSMOCG00000013080	Prpf38a	71	88.235	ENSMAMG00000015431	prpf38a	100	81.470	Mastacembelus_armatus
ENSMOCG00000013080	Prpf38a	71	86.425	ENSMZEG00005017838	prpf38a	100	80.192	Maylandia_zebra
ENSMOCG00000013080	Prpf38a	96	97.993	ENSMGAG00000011176	PRPF38A	100	97.993	Meleagris_gallopavo
ENSMOCG00000013080	Prpf38a	85	95.076	ENSMAUG00000018029	-	87	95.238	Mesocricetus_auratus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSMICG00000014193	PRPF38A	100	99.679	Microcebus_murinus
ENSMOCG00000013080	Prpf38a	83	81.783	ENSMMOG00000016972	prpf38a	81	87.446	Mola_mola
ENSMOCG00000013080	Prpf38a	100	98.083	ENSMODG00000000644	PRPF38A	100	98.083	Monodelphis_domestica
ENSMOCG00000013080	Prpf38a	71	88.235	ENSMALG00000019363	prpf38a	97	81.470	Monopterus_albus
ENSMOCG00000013080	Prpf38a	100	99.038	MGP_CAROLIEiJ_G0026269	Prpf38a	100	99.038	Mus_caroli
ENSMOCG00000013080	Prpf38a	100	99.038	ENSMUSG00000063800	Prpf38a	100	99.038	Mus_musculus
ENSMOCG00000013080	Prpf38a	100	99.038	MGP_PahariEiJ_G0028602	Prpf38a	100	99.038	Mus_pahari
ENSMOCG00000013080	Prpf38a	100	98.718	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.718	Mus_spretus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSMPUG00000006896	PRPF38A	100	99.679	Mustela_putorius_furo
ENSMOCG00000013080	Prpf38a	100	100.000	ENSNGAG00000011884	Prpf38a	100	100.000	Nannospalax_galili
ENSMOCG00000013080	Prpf38a	71	85.068	ENSNBRG00000004013	prpf38a	74	84.416	Neolamprologus_brichardi
ENSMOCG00000013080	Prpf38a	97	73.510	ENSNLEG00000012592	-	99	73.510	Nomascus_leucogenys
ENSMOCG00000013080	Prpf38a	100	66.987	ENSNLEG00000033398	-	94	66.987	Nomascus_leucogenys
ENSMOCG00000013080	Prpf38a	93	99.654	ENSNLEG00000017999	PRPF38A	93	99.654	Nomascus_leucogenys
ENSMOCG00000013080	Prpf38a	100	95.192	ENSMEUG00000003860	PRPF38A	100	95.192	Notamacropus_eugenii
ENSMOCG00000013080	Prpf38a	77	100.000	ENSOPRG00000008985	PRPF38A	100	100.000	Ochotona_princeps
ENSMOCG00000013080	Prpf38a	100	99.679	ENSODEG00000005869	PRPF38A	100	99.679	Octodon_degus
ENSMOCG00000013080	Prpf38a	71	86.878	ENSONIG00000007816	prpf38a	100	80.511	Oreochromis_niloticus
ENSMOCG00000013080	Prpf38a	100	65.287	ENSOANG00000009541	-	100	65.287	Ornithorhynchus_anatinus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSOCUG00000000963	PRPF38A	100	99.679	Oryctolagus_cuniculus
ENSMOCG00000013080	Prpf38a	96	82.333	ENSORLG00000013485	prpf38a	99	82.372	Oryzias_latipes
ENSMOCG00000013080	Prpf38a	96	82.333	ENSORLG00020002130	prpf38a	99	82.372	Oryzias_latipes_hni
ENSMOCG00000013080	Prpf38a	96	82.000	ENSORLG00015021393	prpf38a	99	82.051	Oryzias_latipes_hsok
ENSMOCG00000013080	Prpf38a	96	81.879	ENSOMEG00000016333	prpf38a	100	81.789	Oryzias_melastigma
ENSMOCG00000013080	Prpf38a	100	99.679	ENSOGAG00000005423	PRPF38A	100	99.679	Otolemur_garnettii
ENSMOCG00000013080	Prpf38a	100	99.679	ENSOARG00000005373	PRPF38A	100	99.679	Ovis_aries
ENSMOCG00000013080	Prpf38a	100	77.244	ENSPPAG00000033867	-	100	77.244	Pan_paniscus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPPAG00000030905	PRPF38A	100	99.679	Pan_paniscus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPPRG00000013268	PRPF38A	100	99.679	Panthera_pardus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPTIG00000015419	PRPF38A	100	99.679	Panthera_tigris_altaica
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPTRG00000000739	PRPF38A	100	99.679	Pan_troglodytes
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPANG00000015483	PRPF38A	100	99.679	Papio_anubis
ENSMOCG00000013080	Prpf38a	100	78.846	ENSPKIG00000011439	prpf38a	100	80.128	Paramormyrops_kingsleyae
ENSMOCG00000013080	Prpf38a	100	98.077	ENSPSIG00000017487	PRPF38A	100	98.077	Pelodiscus_sinensis
ENSMOCG00000013080	Prpf38a	70	89.401	ENSPMGG00000021352	prpf38a	99	78.641	Periophthalmus_magnuspinnatus
ENSMOCG00000013080	Prpf38a	100	100.000	ENSPEMG00000023277	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSMOCG00000013080	Prpf38a	100	93.968	ENSPEMG00000011212	-	100	93.968	Peromyscus_maniculatus_bairdii
ENSMOCG00000013080	Prpf38a	100	97.764	ENSPCIG00000022369	-	100	97.764	Phascolarctos_cinereus
ENSMOCG00000013080	Prpf38a	83	81.467	ENSPFOG00000004248	prpf38a	100	82.428	Poecilia_formosa
ENSMOCG00000013080	Prpf38a	92	77.055	ENSPLAG00000010328	prpf38a	100	82.428	Poecilia_latipinna
ENSMOCG00000013080	Prpf38a	84	79.323	ENSPMEG00000011804	prpf38a	100	82.428	Poecilia_mexicana
ENSMOCG00000013080	Prpf38a	95	73.667	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSMOCG00000013080	Prpf38a	100	91.167	ENSPPYG00000001348	PRPF38A	100	91.167	Pongo_abelii
ENSMOCG00000013080	Prpf38a	100	99.038	ENSPCAG00000013328	PRPF38A	100	99.038	Procavia_capensis
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPCOG00000016387	-	100	99.679	Propithecus_coquereli
ENSMOCG00000013080	Prpf38a	100	76.603	ENSPCOG00000020709	-	76	80.952	Propithecus_coquereli
ENSMOCG00000013080	Prpf38a	100	99.679	ENSPVAG00000009803	PRPF38A	100	99.679	Pteropus_vampyrus
ENSMOCG00000013080	Prpf38a	71	86.425	ENSPNYG00000005571	prpf38a	100	80.192	Pundamilia_nyererei
ENSMOCG00000013080	Prpf38a	100	82.428	ENSPNAG00000010399	prpf38a	100	82.428	Pygocentrus_nattereri
ENSMOCG00000013080	Prpf38a	100	99.679	ENSRNOG00000009451	Prpf38a	100	99.679	Rattus_norvegicus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSRBIG00000036442	PRPF38A	100	99.679	Rhinopithecus_bieti
ENSMOCG00000013080	Prpf38a	100	62.179	ENSRBIG00000034053	-	100	58.974	Rhinopithecus_bieti
ENSMOCG00000013080	Prpf38a	98	78.431	ENSRROG00000040003	-	99	78.431	Rhinopithecus_roxellana
ENSMOCG00000013080	Prpf38a	100	99.679	ENSRROG00000032788	PRPF38A	100	99.679	Rhinopithecus_roxellana
ENSMOCG00000013080	Prpf38a	100	99.679	ENSSBOG00000019515	PRPF38A	100	99.679	Saimiri_boliviensis_boliviensis
ENSMOCG00000013080	Prpf38a	87	97.417	ENSSHAG00000006906	-	100	97.417	Sarcophilus_harrisii
ENSMOCG00000013080	Prpf38a	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSMOCG00000013080	Prpf38a	100	78.914	ENSSFOG00015013572	prpf38a	100	79.553	Scleropages_formosus
ENSMOCG00000013080	Prpf38a	71	88.688	ENSSMAG00000015379	prpf38a	75	87.879	Scophthalmus_maximus
ENSMOCG00000013080	Prpf38a	71	89.140	ENSSDUG00000001324	prpf38a	100	82.109	Seriola_dumerili
ENSMOCG00000013080	Prpf38a	71	89.140	ENSSLDG00000014803	prpf38a	100	82.109	Seriola_lalandi_dorsalis
ENSMOCG00000013080	Prpf38a	100	82.372	ENSSARG00000014458	PRPF38A	100	82.372	Sorex_araneus
ENSMOCG00000013080	Prpf38a	100	95.833	ENSSPUG00000013259	PRPF38A	100	95.833	Sphenodon_punctatus
ENSMOCG00000013080	Prpf38a	71	70.588	ENSSPAG00000010449	prpf38a	100	64.103	Stegastes_partitus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSSSCG00000028288	PRPF38A	100	99.679	Sus_scrofa
ENSMOCG00000013080	Prpf38a	100	93.590	ENSTGUG00000008995	PRPF38A	100	93.590	Taeniopygia_guttata
ENSMOCG00000013080	Prpf38a	71	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSMOCG00000013080	Prpf38a	71	86.547	ENSTNIG00000005533	prpf38a	100	80.000	Tetraodon_nigroviridis
ENSMOCG00000013080	Prpf38a	100	99.038	ENSTBEG00000000725	PRPF38A	100	99.038	Tupaia_belangeri
ENSMOCG00000013080	Prpf38a	100	99.679	ENSTTRG00000016139	PRPF38A	100	99.679	Tursiops_truncatus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSUAMG00000000625	PRPF38A	100	99.679	Ursus_americanus
ENSMOCG00000013080	Prpf38a	100	99.679	ENSUMAG00000022674	PRPF38A	100	99.679	Ursus_maritimus
ENSMOCG00000013080	Prpf38a	74	99.134	ENSVPAG00000000907	PRPF38A	100	93.910	Vicugna_pacos
ENSMOCG00000013080	Prpf38a	100	99.679	ENSVVUG00000004475	PRPF38A	100	99.679	Vulpes_vulpes
ENSMOCG00000013080	Prpf38a	100	84.345	ENSXETG00000008060	prpf38a	100	88.179	Xenopus_tropicalis
ENSMOCG00000013080	Prpf38a	71	88.341	ENSXCOG00000007393	prpf38a	77	87.554	Xiphophorus_couchianus
ENSMOCG00000013080	Prpf38a	71	90.498	ENSXMAG00000026143	prpf38a	100	82.428	Xiphophorus_maculatus