EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000013186 (Gene tree)
Gene ID
101998716
Gene Symbol
Pabpc1l
Alias
1810053B01Rik|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Minus strand
Length
19468 bases
Position
chrLG8:14473061-14492528
Accession
101998716
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000013369PABPPF00658.181.5e-2411
ENSMOCP00000013369RRM_5PF13893.67.8e-1512
ENSMOCP00000013369RRM_5PF13893.67.8e-1522
ENSMOCP00000013369RRM_1PF00076.222.2e-9114
ENSMOCP00000013369RRM_1PF00076.222.2e-9124
ENSMOCP00000013369RRM_1PF00076.222.2e-9134
ENSMOCP00000013369RRM_1PF00076.222.2e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000017115-1827XM_005363146ENSMOCP00000013369608 (aa)XP_005363203-
Gene Model
Click here to download ENSMOCG00000013186's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000013186's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000013186Pabpc1l9957.600ENSMOCG00000001354Pabpc29857.280
ENSMOCG00000013186Pabpc1l10060.938ENSMOCG00000004921-9960.938
ENSMOCG00000013186Pabpc1l6834.940ENSMOCG00000016960Elavl28934.940
ENSMOCG00000013186Pabpc1l7233.735ENSMOCG00000010309Elavl49033.735
ENSMOCG00000013186Pabpc1l5630.864ENSMOCG00000021968-5131.613
ENSMOCG00000013186Pabpc1l9959.300ENSMOCG00000006763Pabpc49660.691
ENSMOCG00000013186Pabpc1l6357.865ENSMOCG00000001554Pabpc59557.778
ENSMOCG00000013186Pabpc1l6159.444ENSMOCG00000007551Pabpc4l9759.444
ENSMOCG00000013186Pabpc1l5334.884ENSMOCG00000004765Celf26634.884
ENSMOCG00000013186Pabpc1l7874.797ENSMOCG00000018191-8974.797
ENSMOCG00000013186Pabpc1l5243.038ENSMOCG00000001511Rbm36143.038
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000013186Pabpc1l9974.838ENSG00000101104PABPC1L9985.185Homo_sapiens
ENSMOCG00000013186Pabpc1l9859.744ENSAPOG00000010842pabpc1l9860.064Acanthochromis_polyacanthus
ENSMOCG00000013186Pabpc1l9868.154ENSAMEG00000004099PABPC1L9969.231Ailuropoda_melanoleuca
ENSMOCG00000013186Pabpc1l9967.561ENSACIG00000021004-9967.561Amphilophus_citrinellus
ENSMOCG00000013186Pabpc1l9859.455ENSAOCG00000006167-9958.730Amphiprion_ocellaris
ENSMOCG00000013186Pabpc1l9967.312ENSAPEG00000010558-9775.248Amphiprion_percula
ENSMOCG00000013186Pabpc1l9960.905ENSATEG00000007428pabpc1l9960.905Anabas_testudineus
ENSMOCG00000013186Pabpc1l9864.943ENSAPLG00000008415PABPC1L9964.537Anas_platyrhynchos
ENSMOCG00000013186Pabpc1l9964.800ENSACAG00000011841PABPC1L9864.800Anolis_carolinensis
ENSMOCG00000013186Pabpc1l9974.157ENSANAG00000026826PABPC1L9974.157Aotus_nancymaae
ENSMOCG00000013186Pabpc1l9958.610ENSACLG00000024791pabpc1l9958.610Astatotilapia_calliptera
ENSMOCG00000013186Pabpc1l9961.392ENSAMXG00000013552pabpc1l9961.392Astyanax_mexicanus
ENSMOCG00000013186Pabpc1l5988.690ENSBTAG00000055300-10088.690Bos_taurus
ENSMOCG00000013186Pabpc1l6764.769ENSBTAG00000016849PABPC1L8664.769Bos_taurus
ENSMOCG00000013186Pabpc1l9974.157ENSCJAG00000017628PABPC1L9974.157Callithrix_jacchus
ENSMOCG00000013186Pabpc1l6071.264ENSCJAG00000038506-10071.264Callithrix_jacchus
ENSMOCG00000013186Pabpc1l9867.388ENSCAFG00000009573PABPC1L9967.388Canis_familiaris
ENSMOCG00000013186Pabpc1l9974.878ENSCAFG00020013828PABPC1L9974.878Canis_lupus_dingo
ENSMOCG00000013186Pabpc1l9774.295ENSCHIG00000025759PABPC1L9174.295Capra_hircus
ENSMOCG00000013186Pabpc1l9974.020ENSTSYG00000006645PABPC1L9974.020Carlito_syrichta
ENSMOCG00000013186Pabpc1l9974.254ENSCAPG00000014519PABPC1L9974.254Cavia_aperea
ENSMOCG00000013186Pabpc1l9975.162ENSCPOG00000013633PABPC1L9975.162Cavia_porcellus
ENSMOCG00000013186Pabpc1l9974.510ENSCCAG00000023338PABPC1L9974.510Cebus_capucinus
ENSMOCG00000013186Pabpc1l9975.327ENSCATG00000034065PABPC1L9975.162Cercocebus_atys
ENSMOCG00000013186Pabpc1l9974.675ENSCLAG00000005298PABPC1L9975.487Chinchilla_lanigera
ENSMOCG00000013186Pabpc1l9975.490ENSCSAG00000014242PABPC1L9975.325Chlorocebus_sabaeus
ENSMOCG00000013186Pabpc1l6274.242ENSCPBG00000007810-8174.242Chrysemys_picta_bellii
ENSMOCG00000013186Pabpc1l7174.886ENSCPBG00000017755-9874.886Chrysemys_picta_bellii
ENSMOCG00000013186Pabpc1l9844.204ENSCING00000002796-9846.185Ciona_intestinalis
ENSMOCG00000013186Pabpc1l9954.333ENSCSAVG00000003102-10077.397Ciona_savignyi
ENSMOCG00000013186Pabpc1l9955.556ENSCSAVG00000004246-9856.061Ciona_savignyi
ENSMOCG00000013186Pabpc1l9971.360ENSCANG00000037530PABPC1L9971.360Colobus_angolensis_palliatus
ENSMOCG00000013186Pabpc1l10092.447ENSCGRG00001021938Pabpc1l10092.447Cricetulus_griseus_chok1gshd
ENSMOCG00000013186Pabpc1l10092.447ENSCGRG00000007946Pabpc1l10092.447Cricetulus_griseus_crigri
ENSMOCG00000013186Pabpc1l9959.901ENSCSEG00000021295pabpc1l9959.901Cynoglossus_semilaevis
ENSMOCG00000013186Pabpc1l9862.418ENSCVAG00000015943-9978.788Cyprinodon_variegatus
ENSMOCG00000013186Pabpc1l9961.120ENSDARG00000002597pabpc1l8879.231Danio_rerio
ENSMOCG00000013186Pabpc1l9975.163ENSDNOG00000048450PABPC1L9975.163Dasypus_novemcinctus
ENSMOCG00000013186Pabpc1l10076.575ENSDORG00000001067Pabpc1l10076.575Dipodomys_ordii
ENSMOCG00000013186Pabpc1l9583.333ENSETEG00000009969PABPC1L7183.333Echinops_telfairi
ENSMOCG00000013186Pabpc1l6654.789ENSEASG00005023407-9654.789Equus_asinus_asinus
ENSMOCG00000013186Pabpc1l5986.905ENSEASG00005023408-10086.905Equus_asinus_asinus
ENSMOCG00000013186Pabpc1l6772.103ENSECAG00000040139-8372.103Equus_caballus
ENSMOCG00000013186Pabpc1l9972.447ENSEEUG00000005978PABPC1L9972.447Erinaceus_europaeus
ENSMOCG00000013186Pabpc1l9960.597ENSELUG00000001811pabpc1l9960.597Esox_lucius
ENSMOCG00000013186Pabpc1l9974.392ENSFCAG00000011692PABPC1L9974.392Felis_catus
ENSMOCG00000013186Pabpc1l8069.636ENSFALG00000005372PABPC1L8369.636Ficedula_albicollis
ENSMOCG00000013186Pabpc1l9972.876ENSFDAG00000008291PABPC1L9972.876Fukomys_damarensis
ENSMOCG00000013186Pabpc1l9960.191ENSFHEG00000003398pabpc1l9960.191Fundulus_heteroclitus
ENSMOCG00000013186Pabpc1l9960.191ENSGMOG00000004437pabpc1l9960.159Gadus_morhua
ENSMOCG00000013186Pabpc1l8874.092ENSGALG00000004123PABPC1L9976.499Gallus_gallus
ENSMOCG00000013186Pabpc1l9957.143ENSGAFG00000021057pabpc1l9957.143Gambusia_affinis
ENSMOCG00000013186Pabpc1l9860.287ENSGACG00000002792pabpc1l9960.287Gasterosteus_aculeatus
ENSMOCG00000013186Pabpc1l9966.190ENSGAGG00000000589PABPC1L9871.834Gopherus_agassizii
ENSMOCG00000013186Pabpc1l9975.000ENSGGOG00000004584PABPC1L9975.000Gorilla_gorilla
ENSMOCG00000013186Pabpc1l9959.247ENSHBUG00000006134pabpc1l9959.247Haplochromis_burtoni
ENSMOCG00000013186Pabpc1l9975.980ENSHGLG00000008434PABPC1L9975.980Heterocephalus_glaber_female
ENSMOCG00000013186Pabpc1l9975.980ENSHGLG00100012151PABPC1L9975.980Heterocephalus_glaber_male
ENSMOCG00000013186Pabpc1l6175.281ENSHGLG00100019506-10075.281Heterocephalus_glaber_male
ENSMOCG00000013186Pabpc1l9861.020ENSHCOG00000009270pabpc1l9961.020Hippocampus_comes
ENSMOCG00000013186Pabpc1l6058.046ENSIPUG00000006760-8858.046Ictalurus_punctatus
ENSMOCG00000013186Pabpc1l9961.316ENSIPUG00000012602pabpc1l9961.316Ictalurus_punctatus
ENSMOCG00000013186Pabpc1l6353.769ENSIPUG00000006780-9653.769Ictalurus_punctatus
ENSMOCG00000013186Pabpc1l9976.136ENSSTOG00000003739PABPC1L9976.136Ictidomys_tridecemlineatus
ENSMOCG00000013186Pabpc1l9974.725ENSJJAG00000022406Pabpc1l9972.295Jaculus_jaculus
ENSMOCG00000013186Pabpc1l9961.526ENSKMAG00000016847pabpc1l9961.526Kryptolebias_marmoratus
ENSMOCG00000013186Pabpc1l9860.755ENSLBEG00000010084pabpc1l9960.755Labrus_bergylta
ENSMOCG00000013186Pabpc1l9961.006ENSLACG00000005762PABPC1L9962.956Latimeria_chalumnae
ENSMOCG00000013186Pabpc1l9961.746ENSLOCG00000007519pabpc1l9961.746Lepisosteus_oculatus
ENSMOCG00000013186Pabpc1l9973.280ENSLAFG00000003553PABPC1L10073.280Loxodonta_africana
ENSMOCG00000013186Pabpc1l9975.327ENSMFAG00000040365PABPC1L9975.162Macaca_fascicularis
ENSMOCG00000013186Pabpc1l9973.290ENSMNEG00000032298PABPC1L9973.139Macaca_nemestrina
ENSMOCG00000013186Pabpc1l9975.327ENSMLEG00000043139PABPC1L9975.162Mandrillus_leucophaeus
ENSMOCG00000013186Pabpc1l9860.423ENSMAMG00000011854pabpc1l9860.423Mastacembelus_armatus
ENSMOCG00000013186Pabpc1l9958.610ENSMZEG00005023713pabpc1l9958.610Maylandia_zebra
ENSMOCG00000013186Pabpc1l9965.924ENSMGAG00000003674PABPC1L9965.924Meleagris_gallopavo
ENSMOCG00000013186Pabpc1l9960.450ENSMMOG00000020574-9078.462Mola_mola
ENSMOCG00000013186Pabpc1l9770.284ENSMODG00000016198PABPC1L9970.284Monodelphis_domestica
ENSMOCG00000013186Pabpc1l9759.180ENSMALG00000021622pabpc1l10059.180Monopterus_albus
ENSMOCG00000013186Pabpc1l9989.127MGP_CAROLIEiJ_G0024627Pabpc1l10089.127Mus_caroli
ENSMOCG00000013186Pabpc1l9989.127ENSMUSG00000054582Pabpc1l10089.127Mus_musculus
ENSMOCG00000013186Pabpc1l9989.604MGP_PahariEiJ_G0026071Pabpc1l9989.604Mus_pahari
ENSMOCG00000013186Pabpc1l9989.127MGP_SPRETEiJ_G0025549Pabpc1l10089.127Mus_spretus
ENSMOCG00000013186Pabpc1l9972.843ENSMPUG00000017646PABPC1L9972.843Mustela_putorius_furo
ENSMOCG00000013186Pabpc1l9871.129ENSMLUG00000006324PABPC1L9771.129Myotis_lucifugus
ENSMOCG00000013186Pabpc1l10086.371ENSNGAG00000010458Pabpc1l10086.371Nannospalax_galili
ENSMOCG00000013186Pabpc1l9967.554ENSNBRG00000016633pabpc1l9967.554Neolamprologus_brichardi
ENSMOCG00000013186Pabpc1l8967.089ENSMEUG00000007905-8967.089Notamacropus_eugenii
ENSMOCG00000013186Pabpc1l9973.744ENSOPRG00000011846PABPC1L9973.744Ochotona_princeps
ENSMOCG00000013186Pabpc1l9968.249ENSODEG00000015482PABPC1L9968.249Octodon_degus
ENSMOCG00000013186Pabpc1l5968.750ENSODEG00000002920-9768.750Octodon_degus
ENSMOCG00000013186Pabpc1l9958.610ENSONIG00000017314pabpc1l9958.610Oreochromis_niloticus
ENSMOCG00000013186Pabpc1l8959.928ENSOANG00000015793-10059.928Ornithorhynchus_anatinus
ENSMOCG00000013186Pabpc1l9969.525ENSOCUG00000003005PABPC1L9969.525Oryctolagus_cuniculus
ENSMOCG00000013186Pabpc1l9864.692ENSORLG00000010322pabpc1l9864.692Oryzias_latipes
ENSMOCG00000013186Pabpc1l9864.692ENSORLG00020021193pabpc1l9864.692Oryzias_latipes_hni
ENSMOCG00000013186Pabpc1l9864.692ENSORLG00015017018pabpc1l9864.692Oryzias_latipes_hsok
ENSMOCG00000013186Pabpc1l9956.839ENSOMEG00000010789pabpc1l9956.839Oryzias_melastigma
ENSMOCG00000013186Pabpc1l9972.857ENSOGAG00000032999PABPC1L10072.857Otolemur_garnettii
ENSMOCG00000013186Pabpc1l9974.837ENSOARG00000004578PABPC1L9974.837Ovis_aries
ENSMOCG00000013186Pabpc1l9974.675ENSPPAG00000039677PABPC1L9974.675Pan_paniscus
ENSMOCG00000013186Pabpc1l6374.691ENSPPRG00000019327-9874.691Panthera_pardus
ENSMOCG00000013186Pabpc1l9975.083ENSPTIG00000006524PABPC1L9975.083Panthera_tigris_altaica
ENSMOCG00000013186Pabpc1l6684.877ENSPTRG00000013531PABPC1L9984.877Pan_troglodytes
ENSMOCG00000013186Pabpc1l9975.327ENSPANG00000018788PABPC1L9975.162Papio_anubis
ENSMOCG00000013186Pabpc1l9961.807ENSPKIG00000007322pabpc1l9961.807Paramormyrops_kingsleyae
ENSMOCG00000013186Pabpc1l5476.336ENSPKIG00000016810-9376.336Paramormyrops_kingsleyae
ENSMOCG00000013186Pabpc1l6776.513ENSPSIG00000013289PABPC1L9876.513Pelodiscus_sinensis
ENSMOCG00000013186Pabpc1l6272.093ENSPMGG00000023117pabpc1l9772.093Periophthalmus_magnuspinnatus
ENSMOCG00000013186Pabpc1l6964.021ENSPMGG00000023121-8864.021Periophthalmus_magnuspinnatus
ENSMOCG00000013186Pabpc1l9992.928ENSPEMG00000020671Pabpc1l9992.928Peromyscus_maniculatus_bairdii
ENSMOCG00000013186Pabpc1l9961.650ENSPFOG00000013241pabpc1l9960.766Poecilia_formosa
ENSMOCG00000013186Pabpc1l9960.925ENSPLAG00000017490-9960.925Poecilia_latipinna
ENSMOCG00000013186Pabpc1l5379.231ENSPLAG00000023686-9279.231Poecilia_latipinna
ENSMOCG00000013186Pabpc1l5379.231ENSPMEG00000009185-8879.231Poecilia_mexicana
ENSMOCG00000013186Pabpc1l9960.772ENSPMEG00000007677pabpc1l9960.772Poecilia_mexicana
ENSMOCG00000013186Pabpc1l6771.845ENSPREG00000015886pabpc1l10071.845Poecilia_reticulata
ENSMOCG00000013186Pabpc1l9975.162ENSPPYG00000011042PABPC1L9975.162Pongo_abelii
ENSMOCG00000013186Pabpc1l6381.250ENSPCAG00000011787-7581.250Procavia_capensis
ENSMOCG00000013186Pabpc1l9972.876ENSPCOG00000020630PABPC1L9972.876Propithecus_coquereli
ENSMOCG00000013186Pabpc1l9973.582ENSPVAG00000012663PABPC1L9973.582Pteropus_vampyrus
ENSMOCG00000013186Pabpc1l9967.554ENSPNYG00000004101pabpc1l9967.554Pundamilia_nyererei
ENSMOCG00000013186Pabpc1l9954.936ENSPNAG00000021248pabpc1l9954.936Pygocentrus_nattereri
ENSMOCG00000013186Pabpc1l9989.934ENSRNOG00000012750Pabpc1l9989.934Rattus_norvegicus
ENSMOCG00000013186Pabpc1l9975.162ENSRBIG00000035381PABPC1L9975.162Rhinopithecus_bieti
ENSMOCG00000013186Pabpc1l9975.000ENSRROG00000044498PABPC1L9975.000Rhinopithecus_roxellana
ENSMOCG00000013186Pabpc1l9974.277ENSSBOG00000009532-9974.277Saimiri_boliviensis_boliviensis
ENSMOCG00000013186Pabpc1l9765.041ENSSHAG00000011446PABPC1L10065.041Sarcophilus_harrisii
ENSMOCG00000013186Pabpc1l9963.462ENSSFOG00015017304pabpc1l9963.462Scleropages_formosus
ENSMOCG00000013186Pabpc1l9960.577ENSSMAG00000010516pabpc1l9878.295Scophthalmus_maximus
ENSMOCG00000013186Pabpc1l9960.320ENSSDUG00000014743pabpc1l9960.320Seriola_dumerili
ENSMOCG00000013186Pabpc1l9967.797ENSSLDG00000006981pabpc1l9870.776Seriola_lalandi_dorsalis
ENSMOCG00000013186Pabpc1l9963.766ENSSPUG00000004233PABPC1L9863.766Sphenodon_punctatus
ENSMOCG00000013186Pabpc1l9859.934ENSSPAG00000017137pabpc1l9959.934Stegastes_partitus
ENSMOCG00000013186Pabpc1l9973.529ENSSSCG00000007382PABPC1L9973.529Sus_scrofa
ENSMOCG00000013186Pabpc1l9964.375ENSTGUG00000005114PABPC1L9964.375Taeniopygia_guttata
ENSMOCG00000013186Pabpc1l9759.516ENSTRUG00000011085pabpc1l9759.516Takifugu_rubripes
ENSMOCG00000013186Pabpc1l9857.753ENSTNIG00000017903pabpc1l9857.753Tetraodon_nigroviridis
ENSMOCG00000013186Pabpc1l9785.616ENSTBEG00000002851PABPC1L8085.616Tupaia_belangeri
ENSMOCG00000013186Pabpc1l9473.494ENSTTRG00000007618PABPC1L10073.702Tursiops_truncatus
ENSMOCG00000013186Pabpc1l9972.549ENSUAMG00000017682PABPC1L9972.549Ursus_americanus
ENSMOCG00000013186Pabpc1l6782.254ENSUMAG00000025436PABPC1L9182.254Ursus_maritimus
ENSMOCG00000013186Pabpc1l9981.923ENSVVUG00000018939PABPC1L9981.923Vulpes_vulpes
ENSMOCG00000013186Pabpc1l9959.683ENSXETG00000022831pabpc1l9959.683Xenopus_tropicalis
ENSMOCG00000013186Pabpc1l9965.741ENSXCOG00000005459pabpc1l9975.177Xiphophorus_couchianus
ENSMOCG00000013186Pabpc1l9960.447ENSXMAG00000017135pabpc1l9960.447Xiphophorus_maculatus

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