EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000013259 (Gene tree)
Gene ID: 101979386
Gene Symbol: Zbtb40
Alias: -
Full Name: zinc finger and BTB domain containing 40
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 34074 bases
Position: chr10:47804649-47838722
Accession: 101979386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000013490	zf-C2H2	PF00096.26	2.8e-35	1	4
ENSMOCP00000013490	zf-C2H2	PF00096.26	2.8e-35	2	4
ENSMOCP00000013490	zf-C2H2	PF00096.26	2.8e-35	3	4
ENSMOCP00000013490	zf-C2H2	PF00096.26	2.8e-35	4	4
ENSMOCP00000013487	zf-C2H2	PF00096.26	1.5e-34	1	4
ENSMOCP00000013487	zf-C2H2	PF00096.26	1.5e-34	2	4
ENSMOCP00000013487	zf-C2H2	PF00096.26	1.5e-34	3	4
ENSMOCP00000013487	zf-C2H2	PF00096.26	1.5e-34	4	4
ENSMOCP00000013490	zf-met	PF12874.7	3.1e-05	1	1
ENSMOCP00000013487	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000017236	-	3768	XM_013348463	ENSMOCP00000013487	1255 (aa)	XP_013203917	-
ENSMOCT00000017239	-	3369	-	ENSMOCP00000013490	1122 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000013259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000013259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000013259	Zbtb40	54	36.653	ENSMOCG00000015696	Mynn	66	37.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000013259	Zbtb40	100	81.993	ENSG00000184677	ZBTB40	100	82.452	Homo_sapiens
ENSMOCG00000013259	Zbtb40	100	76.596	ENSAMEG00000014635	ZBTB40	100	78.384	Ailuropoda_melanoleuca
ENSMOCG00000013259	Zbtb40	100	80.847	ENSANAG00000010550	ZBTB40	100	80.847	Aotus_nancymaae
ENSMOCG00000013259	Zbtb40	100	74.508	ENSBTAG00000016448	ZBTB40	100	77.840	Bos_taurus
ENSMOCG00000013259	Zbtb40	100	80.759	ENSCJAG00000005869	ZBTB40	100	81.798	Callithrix_jacchus
ENSMOCG00000013259	Zbtb40	100	76.572	ENSCAFG00000014644	ZBTB40	100	80.899	Canis_familiaris
ENSMOCG00000013259	Zbtb40	100	79.310	ENSCAFG00020019562	ZBTB40	100	80.787	Canis_lupus_dingo
ENSMOCG00000013259	Zbtb40	100	74.019	ENSCHIG00000007943	ZBTB40	100	74.019	Capra_hircus
ENSMOCG00000013259	Zbtb40	100	79.496	ENSTSYG00000000979	ZBTB40	100	79.401	Carlito_syrichta
ENSMOCG00000013259	Zbtb40	100	78.553	ENSCAPG00000009177	ZBTB40	100	78.553	Cavia_aperea
ENSMOCG00000013259	Zbtb40	100	84.400	ENSCPOG00000012844	ZBTB40	100	84.400	Cavia_porcellus
ENSMOCG00000013259	Zbtb40	100	80.318	ENSCCAG00000021093	ZBTB40	100	81.348	Cebus_capucinus
ENSMOCG00000013259	Zbtb40	100	81.007	ENSCATG00000031739	ZBTB40	100	82.115	Cercocebus_atys
ENSMOCG00000013259	Zbtb40	100	82.333	ENSCLAG00000015032	ZBTB40	100	82.790	Chinchilla_lanigera
ENSMOCG00000013259	Zbtb40	100	78.346	ENSCSAG00000000911	ZBTB40	100	82.002	Chlorocebus_sabaeus
ENSMOCG00000013259	Zbtb40	100	94.253	ENSCHOG00000011197	ZBTB40	93	94.253	Choloepus_hoffmanni
ENSMOCG00000013259	Zbtb40	100	81.427	ENSCANG00000038636	ZBTB40	100	81.890	Colobus_angolensis_palliatus
ENSMOCG00000013259	Zbtb40	100	90.207	ENSCGRG00001016016	Zbtb40	100	90.207	Cricetulus_griseus_chok1gshd
ENSMOCG00000013259	Zbtb40	100	90.366	ENSCGRG00000008459	Zbtb40	100	90.366	Cricetulus_griseus_crigri
ENSMOCG00000013259	Zbtb40	92	50.943	ENSDARG00000091762	zbtb40	99	50.943	Danio_rerio
ENSMOCG00000013259	Zbtb40	100	84.302	ENSDNOG00000006200	ZBTB40	100	84.302	Dasypus_novemcinctus
ENSMOCG00000013259	Zbtb40	100	80.885	ENSDORG00000016495	Zbtb40	100	80.885	Dipodomys_ordii
ENSMOCG00000013259	Zbtb40	100	76.425	ENSEASG00005007270	ZBTB40	100	77.981	Equus_asinus_asinus
ENSMOCG00000013259	Zbtb40	99	76.119	ENSECAG00000016319	ZBTB40	98	79.797	Equus_caballus
ENSMOCG00000013259	Zbtb40	80	76.512	ENSEEUG00000001708	ZBTB40	98	76.512	Erinaceus_europaeus
ENSMOCG00000013259	Zbtb40	100	79.876	ENSFCAG00000028182	ZBTB40	100	80.787	Felis_catus
ENSMOCG00000013259	Zbtb40	100	78.407	ENSFDAG00000003410	ZBTB40	100	78.407	Fukomys_damarensis
ENSMOCG00000013259	Zbtb40	100	81.880	ENSGGOG00000010010	ZBTB40	100	82.340	Gorilla_gorilla
ENSMOCG00000013259	Zbtb40	100	93.933	ENSHGLG00000016950	ZBTB40	95	72.584	Heterocephalus_glaber_female
ENSMOCG00000013259	Zbtb40	100	93.933	ENSHGLG00100008314	ZBTB40	95	72.584	Heterocephalus_glaber_male
ENSMOCG00000013259	Zbtb40	100	80.990	ENSSTOG00000009598	ZBTB40	100	80.990	Ictidomys_tridecemlineatus
ENSMOCG00000013259	Zbtb40	100	82.412	ENSJJAG00000018013	Zbtb40	100	82.965	Jaculus_jaculus
ENSMOCG00000013259	Zbtb40	100	80.328	ENSLAFG00000006483	ZBTB40	100	80.328	Loxodonta_africana
ENSMOCG00000013259	Zbtb40	100	80.919	ENSMFAG00000043032	ZBTB40	100	81.890	Macaca_fascicularis
ENSMOCG00000013259	Zbtb40	100	80.919	ENSMMUG00000018618	ZBTB40	100	81.890	Macaca_mulatta
ENSMOCG00000013259	Zbtb40	100	81.427	ENSMNEG00000032628	ZBTB40	100	81.890	Macaca_nemestrina
ENSMOCG00000013259	Zbtb40	100	81.007	ENSMLEG00000027910	ZBTB40	100	82.002	Mandrillus_leucophaeus
ENSMOCG00000013259	Zbtb40	100	89.889	ENSMAUG00000010466	Zbtb40	100	89.889	Mesocricetus_auratus
ENSMOCG00000013259	Zbtb40	100	83.483	ENSMICG00000007464	ZBTB40	100	83.483	Microcebus_murinus
ENSMOCG00000013259	Zbtb40	100	86.577	MGP_CAROLIEiJ_G0026672	Zbtb40	100	86.577	Mus_caroli
ENSMOCG00000013259	Zbtb40	100	86.497	ENSMUSG00000060862	Zbtb40	99	95.522	Mus_musculus
ENSMOCG00000013259	Zbtb40	100	86.418	MGP_PahariEiJ_G0029005	Zbtb40	100	86.418	Mus_pahari
ENSMOCG00000013259	Zbtb40	100	86.577	MGP_SPRETEiJ_G0027652	Zbtb40	100	86.577	Mus_spretus
ENSMOCG00000013259	Zbtb40	100	74.961	ENSMPUG00000015961	ZBTB40	100	78.989	Mustela_putorius_furo
ENSMOCG00000013259	Zbtb40	100	82.230	ENSNGAG00000019354	Zbtb40	100	82.230	Nannospalax_galili
ENSMOCG00000013259	Zbtb40	100	81.653	ENSNLEG00000008268	ZBTB40	100	82.115	Nomascus_leucogenys
ENSMOCG00000013259	Zbtb40	100	78.202	ENSOPRG00000003103	ZBTB40	95	78.270	Ochotona_princeps
ENSMOCG00000013259	Zbtb40	100	79.914	ENSOGAG00000004797	ZBTB40	100	79.914	Otolemur_garnettii
ENSMOCG00000013259	Zbtb40	100	73.767	ENSOARG00000008054	ZBTB40	100	73.767	Ovis_aries
ENSMOCG00000013259	Zbtb40	100	81.540	ENSPPAG00000034112	ZBTB40	100	82.002	Pan_paniscus
ENSMOCG00000013259	Zbtb40	100	79.612	ENSPPRG00000021468	ZBTB40	100	80.787	Panthera_pardus
ENSMOCG00000013259	Zbtb40	100	79.523	ENSPTIG00000010874	ZBTB40	100	80.674	Panthera_tigris_altaica
ENSMOCG00000013259	Zbtb40	100	81.427	ENSPTRG00000000315	ZBTB40	100	81.890	Pan_troglodytes
ENSMOCG00000013259	Zbtb40	100	81.540	ENSPANG00000018749	ZBTB40	100	82.002	Papio_anubis
ENSMOCG00000013259	Zbtb40	100	89.976	ENSPEMG00000009389	Zbtb40	100	89.976	Peromyscus_maniculatus_bairdii
ENSMOCG00000013259	Zbtb40	100	65.282	ENSPCIG00000026425	ZBTB40	100	65.415	Phascolarctos_cinereus
ENSMOCG00000013259	Zbtb40	100	78.346	ENSPPYG00000001752	ZBTB40	100	82.340	Pongo_abelii
ENSMOCG00000013259	Zbtb40	100	96.286	ENSPCOG00000006905	ZBTB40	93	96.286	Propithecus_coquereli
ENSMOCG00000013259	Zbtb40	100	86.497	ENSRNOG00000022039	Zbtb40	100	86.497	Rattus_norvegicus
ENSMOCG00000013259	Zbtb40	100	80.691	ENSRBIG00000034608	ZBTB40	100	81.665	Rhinopithecus_bieti
ENSMOCG00000013259	Zbtb40	100	80.779	ENSRROG00000034514	ZBTB40	100	81.777	Rhinopithecus_roxellana
ENSMOCG00000013259	Zbtb40	100	80.725	ENSSBOG00000027235	ZBTB40	100	81.573	Saimiri_boliviensis_boliviensis
ENSMOCG00000013259	Zbtb40	100	79.864	ENSUAMG00000020372	ZBTB40	100	79.864	Ursus_americanus
ENSMOCG00000013259	Zbtb40	100	80.543	ENSUMAG00000013539	ZBTB40	100	79.823	Ursus_maritimus
ENSMOCG00000013259	Zbtb40	100	79.310	ENSVVUG00000025752	ZBTB40	100	80.899	Vulpes_vulpes