EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000013601 (Gene tree)
Gene ID: 101996595
Gene Symbol: Npm3
Alias: Nub1
Full Name: nucleophosmin/nucleoplasmin 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 1907 bases
Position: chr8:73357918-73359824
Accession: 101996595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000013966	Nucleoplasmin	PF03066.15	8.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000017721	-	923	XM_005352372	ENSMOCP00000013966	172 (aa)	XP_005352429	UPI00038C357A

Gene Model

Click here to download ENSMOCG00000013601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000013601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000013601	Npm3	61	36.792	ENSMOCG00000017251	Npm2	56	36.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000013601	Npm3	99	84.181	ENSG00000107833	NPM3	94	84.431	Homo_sapiens
ENSMOCG00000013601	Npm3	66	50.862	ENSAPOG00000013083	npm3	87	48.252	Acanthochromis_polyacanthus
ENSMOCG00000013601	Npm3	99	86.364	ENSAMEG00000017639	-	99	86.364	Ailuropoda_melanoleuca
ENSMOCG00000013601	Npm3	87	63.924	ENSAMEG00000019414	-	93	64.557	Ailuropoda_melanoleuca
ENSMOCG00000013601	Npm3	78	50.000	ENSACIG00000022586	npm3	84	50.000	Amphilophus_citrinellus
ENSMOCG00000013601	Npm3	62	52.830	ENSAOCG00000009376	npm3	87	47.518	Amphiprion_ocellaris
ENSMOCG00000013601	Npm3	62	52.830	ENSAPEG00000015863	npm3	87	47.518	Amphiprion_percula
ENSMOCG00000013601	Npm3	62	52.830	ENSATEG00000022752	npm3	66	52.336	Anabas_testudineus
ENSMOCG00000013601	Npm3	58	73.000	ENSAPLG00000010935	NPM3	66	72.277	Anas_platyrhynchos
ENSMOCG00000013601	Npm3	60	66.019	ENSACAG00000011936	NPM3	62	66.019	Anolis_carolinensis
ENSMOCG00000013601	Npm3	99	84.746	ENSANAG00000027082	-	94	83.832	Aotus_nancymaae
ENSMOCG00000013601	Npm3	99	71.591	ENSANAG00000033290	-	93	71.429	Aotus_nancymaae
ENSMOCG00000013601	Npm3	85	82.313	ENSANAG00000023832	-	64	82.963	Aotus_nancymaae
ENSMOCG00000013601	Npm3	92	69.939	ENSANAG00000023070	-	94	69.939	Aotus_nancymaae
ENSMOCG00000013601	Npm3	62	52.830	ENSACLG00000007854	npm3	87	48.936	Astatotilapia_calliptera
ENSMOCG00000013601	Npm3	62	54.717	ENSAMXG00000039828	npm3	54	55.769	Astyanax_mexicanus
ENSMOCG00000013601	Npm3	99	83.429	ENSBTAG00000016335	NPM3	94	83.636	Bos_taurus
ENSMOCG00000013601	Npm3	99	83.616	ENSCJAG00000017650	NPM3	94	83.832	Callithrix_jacchus
ENSMOCG00000013601	Npm3	94	84.242	ENSCAFG00000009919	NPM3	87	86.857	Canis_familiaris
ENSMOCG00000013601	Npm3	99	85.143	ENSCAFG00020009185	NPM3	99	86.857	Canis_lupus_dingo
ENSMOCG00000013601	Npm3	99	83.429	ENSCHIG00000024055	-	94	83.636	Capra_hircus
ENSMOCG00000013601	Npm3	99	58.824	ENSCHIG00000016052	-	92	58.750	Capra_hircus
ENSMOCG00000013601	Npm3	93	48.750	ENSCAPG00000016606	NPM3	93	48.447	Cavia_aperea
ENSMOCG00000013601	Npm3	94	83.851	ENSCPOG00000006301	NPM3	94	83.851	Cavia_porcellus
ENSMOCG00000013601	Npm3	94	82.036	ENSCCAG00000031043	-	94	82.635	Cebus_capucinus
ENSMOCG00000013601	Npm3	99	68.927	ENSCCAG00000029457	-	93	68.263	Cebus_capucinus
ENSMOCG00000013601	Npm3	94	84.431	ENSCATG00000013755	NPM3	99	84.746	Cercocebus_atys
ENSMOCG00000013601	Npm3	94	84.431	ENSCSAG00000005509	NPM3	99	84.746	Chlorocebus_sabaeus
ENSMOCG00000013601	Npm3	94	62.963	ENSCPBG00000003817	NPM3	97	62.733	Chrysemys_picta_bellii
ENSMOCG00000013601	Npm3	99	83.523	ENSCANG00000020300	NPM3	99	84.091	Colobus_angolensis_palliatus
ENSMOCG00000013601	Npm3	99	87.931	ENSCGRG00001013345	Npm3	94	88.415	Cricetulus_griseus_chok1gshd
ENSMOCG00000013601	Npm3	77	86.667	ENSCGRG00000015351	Npm3	85	85.401	Cricetulus_griseus_crigri
ENSMOCG00000013601	Npm3	70	44.882	ENSCSEG00000007944	npm3	76	45.669	Cynoglossus_semilaevis
ENSMOCG00000013601	Npm3	62	51.376	ENSCVAG00000003305	npm3	66	50.909	Cyprinodon_variegatus
ENSMOCG00000013601	Npm3	64	51.818	ENSDARG00000103594	npm3	87	46.479	Danio_rerio
ENSMOCG00000013601	Npm3	99	80.571	ENSDORG00000003491	Npm3	94	80.606	Dipodomys_ordii
ENSMOCG00000013601	Npm3	99	78.531	ENSETEG00000006307	NPM3	94	77.844	Echinops_telfairi
ENSMOCG00000013601	Npm3	94	84.337	ENSEASG00005008834	NPM3	99	85.227	Equus_asinus_asinus
ENSMOCG00000013601	Npm3	94	84.337	ENSECAG00000007524	NPM3	99	85.227	Equus_caballus
ENSMOCG00000013601	Npm3	65	52.679	ENSELUG00000021730	npm3	85	47.826	Esox_lucius
ENSMOCG00000013601	Npm3	99	85.143	ENSFCAG00000007178	NPM3	99	86.286	Felis_catus
ENSMOCG00000013601	Npm3	67	65.217	ENSFALG00000008586	NPM3	72	65.217	Ficedula_albicollis
ENSMOCG00000013601	Npm3	60	84.615	ENSFDAG00000016537	NPM3	99	84.615	Fukomys_damarensis
ENSMOCG00000013601	Npm3	62	51.887	ENSFHEG00000003983	npm3	87	47.794	Fundulus_heteroclitus
ENSMOCG00000013601	Npm3	62	50.000	ENSGMOG00000004317	npm3	94	45.890	Gadus_morhua
ENSMOCG00000013601	Npm3	61	67.619	ENSGALG00000032329	NPM3	71	67.619	Gallus_gallus
ENSMOCG00000013601	Npm3	64	51.818	ENSGAFG00000009135	npm3	74	50.000	Gambusia_affinis
ENSMOCG00000013601	Npm3	62	53.774	ENSGACG00000007294	npm3	71	47.656	Gasterosteus_aculeatus
ENSMOCG00000013601	Npm3	95	57.988	ENSGAGG00000004081	NPM3	88	62.338	Gopherus_agassizii
ENSMOCG00000013601	Npm3	99	84.181	ENSGGOG00000027500	NPM3	94	84.431	Gorilla_gorilla
ENSMOCG00000013601	Npm3	62	51.887	ENSHBUG00000023704	npm3	87	48.921	Haplochromis_burtoni
ENSMOCG00000013601	Npm3	93	80.000	ENSHGLG00000019118	NPM3	99	79.412	Heterocephalus_glaber_female
ENSMOCG00000013601	Npm3	76	80.769	ENSHGLG00100010926	NPM3	98	80.000	Heterocephalus_glaber_male
ENSMOCG00000013601	Npm3	62	48.598	ENSHCOG00000019322	npm3	64	48.148	Hippocampus_comes
ENSMOCG00000013601	Npm3	78	48.148	ENSIPUG00000008204	npm3	87	48.148	Ictalurus_punctatus
ENSMOCG00000013601	Npm3	99	82.955	ENSSTOG00000022621	NPM3	94	83.735	Ictidomys_tridecemlineatus
ENSMOCG00000013601	Npm3	99	82.386	ENSJJAG00000018907	Npm3	94	82.530	Jaculus_jaculus
ENSMOCG00000013601	Npm3	74	49.219	ENSKMAG00000020800	npm3	75	47.761	Kryptolebias_marmoratus
ENSMOCG00000013601	Npm3	62	53.774	ENSLBEG00000015651	npm3	67	52.778	Labrus_bergylta
ENSMOCG00000013601	Npm3	95	46.951	ENSLOCG00000000705	-	87	52.518	Lepisosteus_oculatus
ENSMOCG00000013601	Npm3	94	85.542	ENSLAFG00000023022	NPM3	94	84.940	Loxodonta_africana
ENSMOCG00000013601	Npm3	94	84.431	ENSMFAG00000041878	NPM3	99	84.746	Macaca_fascicularis
ENSMOCG00000013601	Npm3	94	83.832	ENSMMUG00000015774	NPM3	99	84.181	Macaca_mulatta
ENSMOCG00000013601	Npm3	94	84.431	ENSMNEG00000039999	NPM3	99	84.746	Macaca_nemestrina
ENSMOCG00000013601	Npm3	94	84.431	ENSMLEG00000038129	NPM3	99	84.746	Mandrillus_leucophaeus
ENSMOCG00000013601	Npm3	80	45.517	ENSMAMG00000002698	npm3	89	45.517	Mastacembelus_armatus
ENSMOCG00000013601	Npm3	62	52.830	ENSMZEG00005003091	npm3	87	50.000	Maylandia_zebra
ENSMOCG00000013601	Npm3	94	88.415	ENSMAUG00000015218	Npm3	93	89.634	Mesocricetus_auratus
ENSMOCG00000013601	Npm3	99	85.795	ENSMICG00000044119	NPM3	99	85.795	Microcebus_murinus
ENSMOCG00000013601	Npm3	62	52.830	ENSMMOG00000010681	npm3	87	46.099	Mola_mola
ENSMOCG00000013601	Npm3	98	70.520	ENSMODG00000011689	NPM3	94	71.515	Monodelphis_domestica
ENSMOCG00000013601	Npm3	73	46.457	ENSMALG00000016787	npm3	70	47.059	Monopterus_albus
ENSMOCG00000013601	Npm3	99	90.805	MGP_CAROLIEiJ_G0023020	Npm3	99	90.805	Mus_caroli
ENSMOCG00000013601	Npm3	99	89.080	ENSMUSG00000056209	Npm3	99	91.379	Mus_musculus
ENSMOCG00000013601	Npm3	99	89.017	MGP_PahariEiJ_G0014510	Npm3	94	89.571	Mus_pahari
ENSMOCG00000013601	Npm3	99	89.080	MGP_SPRETEiJ_G0023941	Npm3	94	90.854	Mus_spretus
ENSMOCG00000013601	Npm3	99	85.795	ENSMPUG00000016894	NPM3	99	85.795	Mustela_putorius_furo
ENSMOCG00000013601	Npm3	97	80.117	ENSMLUG00000004961	NPM3	93	80.000	Myotis_lucifugus
ENSMOCG00000013601	Npm3	99	84.571	ENSNGAG00000022833	-	94	84.848	Nannospalax_galili
ENSMOCG00000013601	Npm3	99	79.532	ENSNGAG00000000155	-	93	78.882	Nannospalax_galili
ENSMOCG00000013601	Npm3	94	84.431	ENSNLEG00000029281	-	99	84.746	Nomascus_leucogenys
ENSMOCG00000013601	Npm3	94	82.036	ENSNLEG00000018637	-	99	82.486	Nomascus_leucogenys
ENSMOCG00000013601	Npm3	80	75.912	ENSMEUG00000003465	-	93	77.519	Notamacropus_eugenii
ENSMOCG00000013601	Npm3	58	65.657	ENSMEUG00000004931	-	100	65.657	Notamacropus_eugenii
ENSMOCG00000013601	Npm3	58	69.697	ENSMEUG00000002619	-	100	69.697	Notamacropus_eugenii
ENSMOCG00000013601	Npm3	94	80.120	ENSOPRG00000009229	NPM3	94	81.928	Ochotona_princeps
ENSMOCG00000013601	Npm3	97	81.928	ENSODEG00000006704	NPM3	96	81.366	Octodon_degus
ENSMOCG00000013601	Npm3	78	50.714	ENSONIG00000009513	npm3	96	47.531	Oreochromis_niloticus
ENSMOCG00000013601	Npm3	93	85.455	ENSOCUG00000016819	NPM3	93	85.455	Oryctolagus_cuniculus
ENSMOCG00000013601	Npm3	62	52.830	ENSORLG00000008492	npm3	88	47.857	Oryzias_latipes
ENSMOCG00000013601	Npm3	74	46.875	ENSORLG00020002450	npm3	98	43.827	Oryzias_latipes_hni
ENSMOCG00000013601	Npm3	91	42.857	ENSORLG00015006856	npm3	98	43.827	Oryzias_latipes_hsok
ENSMOCG00000013601	Npm3	63	51.376	ENSOMEG00000002666	npm3	74	47.500	Oryzias_melastigma
ENSMOCG00000013601	Npm3	99	84.659	ENSOGAG00000010001	NPM3	94	84.337	Otolemur_garnettii
ENSMOCG00000013601	Npm3	99	82.857	ENSOARG00000016916	NPM3	94	83.636	Ovis_aries
ENSMOCG00000013601	Npm3	99	84.181	ENSPPAG00000040517	NPM3	94	84.431	Pan_paniscus
ENSMOCG00000013601	Npm3	99	85.143	ENSPPRG00000012611	-	99	86.286	Panthera_pardus
ENSMOCG00000013601	Npm3	99	85.714	ENSPTIG00000005390	NPM3	99	86.857	Panthera_tigris_altaica
ENSMOCG00000013601	Npm3	99	84.181	ENSPTRG00000002875	NPM3	94	84.431	Pan_troglodytes
ENSMOCG00000013601	Npm3	94	84.431	ENSPANG00000021046	NPM3	99	84.746	Papio_anubis
ENSMOCG00000013601	Npm3	62	42.453	ENSPKIG00000007609	npm3	57	42.453	Paramormyrops_kingsleyae
ENSMOCG00000013601	Npm3	62	56.075	ENSPMGG00000020204	npm3	70	53.509	Periophthalmus_magnuspinnatus
ENSMOCG00000013601	Npm3	94	90.303	ENSPEMG00000007731	Npm3	99	90.286	Peromyscus_maniculatus_bairdii
ENSMOCG00000013601	Npm3	64	52.727	ENSPFOG00000014692	npm3	69	52.679	Poecilia_formosa
ENSMOCG00000013601	Npm3	64	52.727	ENSPLAG00000009956	npm3	69	52.679	Poecilia_latipinna
ENSMOCG00000013601	Npm3	59	53.465	ENSPMEG00000011795	npm3	71	52.830	Poecilia_mexicana
ENSMOCG00000013601	Npm3	64	52.727	ENSPREG00000020765	npm3	89	47.586	Poecilia_reticulata
ENSMOCG00000013601	Npm3	94	83.432	ENSPPYG00000002589	NPM3	87	83.799	Pongo_abelii
ENSMOCG00000013601	Npm3	99	84.659	ENSPCOG00000014704	NPM3	94	84.940	Propithecus_coquereli
ENSMOCG00000013601	Npm3	94	83.133	ENSPVAG00000004038	NPM3	99	83.523	Pteropus_vampyrus
ENSMOCG00000013601	Npm3	62	51.887	ENSPNYG00000009300	npm3	87	49.286	Pundamilia_nyererei
ENSMOCG00000013601	Npm3	65	54.955	ENSPNAG00000014779	npm3	87	51.471	Pygocentrus_nattereri
ENSMOCG00000013601	Npm3	99	89.535	ENSRNOG00000017622	Npm3	94	90.123	Rattus_norvegicus
ENSMOCG00000013601	Npm3	99	83.523	ENSRBIG00000039086	-	94	84.337	Rhinopithecus_bieti
ENSMOCG00000013601	Npm3	90	73.750	ENSRBIG00000042048	-	89	80.142	Rhinopithecus_bieti
ENSMOCG00000013601	Npm3	99	83.523	ENSRROG00000029912	NPM3	94	84.337	Rhinopithecus_roxellana
ENSMOCG00000013601	Npm3	95	85.882	ENSSBOG00000027661	NPM3	94	85.000	Saimiri_boliviensis_boliviensis
ENSMOCG00000013601	Npm3	92	67.901	ENSSHAG00000008567	NPM3	94	67.273	Sarcophilus_harrisii
ENSMOCG00000013601	Npm3	62	50.000	ENSSFOG00015013651	npm3	70	48.214	Scleropages_formosus
ENSMOCG00000013601	Npm3	62	51.887	ENSSMAG00000003907	npm3	67	51.402	Scophthalmus_maximus
ENSMOCG00000013601	Npm3	62	55.660	ENSSDUG00000022843	npm3	87	48.936	Seriola_dumerili
ENSMOCG00000013601	Npm3	62	55.660	ENSSLDG00000002811	npm3	87	49.645	Seriola_lalandi_dorsalis
ENSMOCG00000013601	Npm3	69	68.033	ENSSPUG00000011875	NPM3	96	64.103	Sphenodon_punctatus
ENSMOCG00000013601	Npm3	65	50.893	ENSSPAG00000002553	npm3	91	47.619	Stegastes_partitus
ENSMOCG00000013601	Npm3	99	81.714	ENSSSCG00000010568	NPM3	94	81.818	Sus_scrofa
ENSMOCG00000013601	Npm3	64	68.182	ENSTGUG00000009948	NPM3	83	68.182	Taeniopygia_guttata
ENSMOCG00000013601	Npm3	92	45.625	ENSTRUG00000011661	npm3	97	45.625	Takifugu_rubripes
ENSMOCG00000013601	Npm3	68	50.427	ENSTNIG00000016518	npm3	74	48.148	Tetraodon_nigroviridis
ENSMOCG00000013601	Npm3	94	85.542	ENSUAMG00000024072	NPM3	72	85.795	Ursus_americanus
ENSMOCG00000013601	Npm3	94	85.542	ENSUMAG00000023016	NPM3	72	85.795	Ursus_maritimus
ENSMOCG00000013601	Npm3	99	86.286	ENSVPAG00000003120	NPM3	99	86.286	Vicugna_pacos
ENSMOCG00000013601	Npm3	94	84.242	ENSVVUG00000000945	NPM3	87	86.857	Vulpes_vulpes
ENSMOCG00000013601	Npm3	81	45.732	ENSXETG00000014472	npm3	68	55.932	Xenopus_tropicalis
ENSMOCG00000013601	Npm3	65	52.679	ENSXCOG00000012121	npm3	67	52.679	Xiphophorus_couchianus
ENSMOCG00000013601	Npm3	65	52.679	ENSXMAG00000013473	npm3	67	52.679	Xiphophorus_maculatus