EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000013721 (Gene tree)
Gene ID: 101991820
Gene Symbol: Apex1
Alias: HAP1|Ref-1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 2274 bases
Position: chrJH996521.1:981622-983895
Accession: 101991820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000014133	Exo_endo_phos	PF03372.23	5.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000017889	-	1394	XM_005370995	ENSMOCP00000014133	317 (aa)	XP_005371052	UPI00038BE00C

Gene Model

Click here to download ENSMOCG00000013721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000013721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000013721	Apex1	100	92.138	ENSG00000100823	APEX1	100	92.138	Homo_sapiens
ENSMOCG00000013721	Apex1	88	69.534	ENSAPOG00000017002	apex1	99	64.444	Acanthochromis_polyacanthus
ENSMOCG00000013721	Apex1	100	93.396	ENSAMEG00000005418	APEX1	100	93.396	Ailuropoda_melanoleuca
ENSMOCG00000013721	Apex1	88	70.863	ENSACIG00000010653	apex1	97	69.792	Amphilophus_citrinellus
ENSMOCG00000013721	Apex1	88	69.176	ENSAOCG00000009649	apex1	99	65.079	Amphiprion_ocellaris
ENSMOCG00000013721	Apex1	88	69.176	ENSAPEG00000021453	apex1	99	65.079	Amphiprion_percula
ENSMOCG00000013721	Apex1	99	67.197	ENSATEG00000002883	apex1	97	67.722	Anabas_testudineus
ENSMOCG00000013721	Apex1	100	69.159	ENSACAG00000008099	APEX1	100	69.159	Anolis_carolinensis
ENSMOCG00000013721	Apex1	100	92.767	ENSANAG00000030117	APEX1	100	92.767	Aotus_nancymaae
ENSMOCG00000013721	Apex1	87	71.377	ENSACLG00000018441	apex1	99	66.667	Astatotilapia_calliptera
ENSMOCG00000013721	Apex1	99	65.397	ENSAMXG00000034699	apex1	98	65.397	Astyanax_mexicanus
ENSMOCG00000013721	Apex1	100	91.509	ENSBTAG00000002745	APEX1	100	91.509	Bos_taurus
ENSMOCG00000013721	Apex1	80	44.531	WBGene00001372	exo-3	88	44.531	Caenorhabditis_elegans
ENSMOCG00000013721	Apex1	100	93.396	ENSCJAG00000009726	APEX1	100	93.396	Callithrix_jacchus
ENSMOCG00000013721	Apex1	100	93.082	ENSCAFG00000032033	APEX1	100	93.082	Canis_familiaris
ENSMOCG00000013721	Apex1	100	93.082	ENSCAFG00020014377	-	100	93.082	Canis_lupus_dingo
ENSMOCG00000013721	Apex1	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSMOCG00000013721	Apex1	100	91.195	ENSCHIG00000007298	-	100	91.195	Capra_hircus
ENSMOCG00000013721	Apex1	98	72.756	ENSCHIG00000014537	-	99	72.756	Capra_hircus
ENSMOCG00000013721	Apex1	100	91.824	ENSTSYG00000034813	APEX1	100	91.824	Carlito_syrichta
ENSMOCG00000013721	Apex1	85	86.716	ENSCAPG00000016235	APEX1	91	94.915	Cavia_aperea
ENSMOCG00000013721	Apex1	100	91.824	ENSCPOG00000030909	APEX1	100	91.824	Cavia_porcellus
ENSMOCG00000013721	Apex1	100	80.189	ENSCCAG00000031931	-	100	80.189	Cebus_capucinus
ENSMOCG00000013721	Apex1	100	93.396	ENSCCAG00000033056	-	100	93.396	Cebus_capucinus
ENSMOCG00000013721	Apex1	100	91.824	ENSCATG00000015580	APEX1	100	91.824	Cercocebus_atys
ENSMOCG00000013721	Apex1	100	92.138	ENSCLAG00000001002	APEX1	100	92.138	Chinchilla_lanigera
ENSMOCG00000013721	Apex1	100	91.509	ENSCSAG00000016685	-	100	91.509	Chlorocebus_sabaeus
ENSMOCG00000013721	Apex1	100	91.509	ENSCSAG00000016670	-	100	91.509	Chlorocebus_sabaeus
ENSMOCG00000013721	Apex1	100	69.592	ENSCPBG00000009567	APEX1	100	69.592	Chrysemys_picta_bellii
ENSMOCG00000013721	Apex1	96	54.276	ENSCING00000008137	-	94	54.276	Ciona_intestinalis
ENSMOCG00000013721	Apex1	100	47.634	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSMOCG00000013721	Apex1	100	92.138	ENSCANG00000030726	APEX1	100	92.138	Colobus_angolensis_palliatus
ENSMOCG00000013721	Apex1	100	93.060	ENSCGRG00001017046	Apex1	100	93.060	Cricetulus_griseus_chok1gshd
ENSMOCG00000013721	Apex1	100	93.060	ENSCGRG00000008984	Apex1	100	93.060	Cricetulus_griseus_crigri
ENSMOCG00000013721	Apex1	99	64.151	ENSCSEG00000017499	apex1	99	64.151	Cynoglossus_semilaevis
ENSMOCG00000013721	Apex1	99	66.984	ENSCVAG00000022075	apex1	99	66.984	Cyprinodon_variegatus
ENSMOCG00000013721	Apex1	100	64.669	ENSDARG00000045843	apex1	100	64.669	Danio_rerio
ENSMOCG00000013721	Apex1	100	88.365	ENSDNOG00000042234	APEX1	95	88.365	Dasypus_novemcinctus
ENSMOCG00000013721	Apex1	100	92.767	ENSDORG00000001616	Apex1	100	92.767	Dipodomys_ordii
ENSMOCG00000013721	Apex1	100	92.138	ENSETEG00000004855	-	100	92.138	Echinops_telfairi
ENSMOCG00000013721	Apex1	75	65.272	ENSEBUG00000000622	-	92	65.272	Eptatretus_burgeri
ENSMOCG00000013721	Apex1	100	94.025	ENSEASG00005017489	APEX1	74	94.025	Equus_asinus_asinus
ENSMOCG00000013721	Apex1	100	94.025	ENSECAG00000022325	APEX1	82	94.025	Equus_caballus
ENSMOCG00000013721	Apex1	91	91.319	ENSEEUG00000012569	APEX1	100	91.319	Erinaceus_europaeus
ENSMOCG00000013721	Apex1	100	64.353	ENSELUG00000021706	apex1	100	64.669	Esox_lucius
ENSMOCG00000013721	Apex1	100	94.025	ENSFCAG00000030869	APEX1	100	94.025	Felis_catus
ENSMOCG00000013721	Apex1	100	91.824	ENSFDAG00000006120	APEX1	100	91.824	Fukomys_damarensis
ENSMOCG00000013721	Apex1	99	67.937	ENSFHEG00000009031	apex1	83	67.937	Fundulus_heteroclitus
ENSMOCG00000013721	Apex1	99	61.270	ENSGMOG00000007943	apex1	99	61.270	Gadus_morhua
ENSMOCG00000013721	Apex1	99	66.984	ENSGAFG00000005311	apex1	99	66.984	Gambusia_affinis
ENSMOCG00000013721	Apex1	99	65.397	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSMOCG00000013721	Apex1	100	69.279	ENSGAGG00000014999	APEX1	100	69.279	Gopherus_agassizii
ENSMOCG00000013721	Apex1	100	92.453	ENSGGOG00000002128	APEX1	100	92.453	Gorilla_gorilla
ENSMOCG00000013721	Apex1	99	66.032	ENSHBUG00000005894	apex1	99	66.456	Haplochromis_burtoni
ENSMOCG00000013721	Apex1	100	92.138	ENSHGLG00000002848	APEX1	100	92.138	Heterocephalus_glaber_female
ENSMOCG00000013721	Apex1	100	92.138	ENSHGLG00100017878	APEX1	100	92.138	Heterocephalus_glaber_male
ENSMOCG00000013721	Apex1	99	66.139	ENSHCOG00000009961	apex1	99	66.139	Hippocampus_comes
ENSMOCG00000013721	Apex1	100	66.771	ENSIPUG00000005799	apex1	100	66.771	Ictalurus_punctatus
ENSMOCG00000013721	Apex1	100	91.509	ENSSTOG00000010096	APEX1	100	91.509	Ictidomys_tridecemlineatus
ENSMOCG00000013721	Apex1	100	92.767	ENSJJAG00000012067	-	100	92.767	Jaculus_jaculus
ENSMOCG00000013721	Apex1	100	83.648	ENSJJAG00000003660	-	100	83.648	Jaculus_jaculus
ENSMOCG00000013721	Apex1	94	84.228	ENSJJAG00000020465	-	96	84.228	Jaculus_jaculus
ENSMOCG00000013721	Apex1	99	66.349	ENSKMAG00000021171	apex1	99	66.349	Kryptolebias_marmoratus
ENSMOCG00000013721	Apex1	99	64.984	ENSLBEG00000010248	apex1	99	64.984	Labrus_bergylta
ENSMOCG00000013721	Apex1	100	65.312	ENSLACG00000008617	APEX1	100	65.312	Latimeria_chalumnae
ENSMOCG00000013721	Apex1	100	67.081	ENSLOCG00000015516	apex1	99	67.081	Lepisosteus_oculatus
ENSMOCG00000013721	Apex1	100	91.195	ENSLAFG00000021872	APEX1	100	91.195	Loxodonta_africana
ENSMOCG00000013721	Apex1	100	91.509	ENSMFAG00000002565	APEX1	100	91.509	Macaca_fascicularis
ENSMOCG00000013721	Apex1	100	91.509	ENSMMUG00000048039	APEX1	100	91.509	Macaca_mulatta
ENSMOCG00000013721	Apex1	100	91.509	ENSMNEG00000036944	APEX1	100	91.509	Macaca_nemestrina
ENSMOCG00000013721	Apex1	100	91.824	ENSMLEG00000042125	APEX1	100	91.824	Mandrillus_leucophaeus
ENSMOCG00000013721	Apex1	99	67.302	ENSMAMG00000023526	apex1	99	67.508	Mastacembelus_armatus
ENSMOCG00000013721	Apex1	87	71.377	ENSMZEG00005014187	apex1	99	66.667	Maylandia_zebra
ENSMOCG00000013721	Apex1	100	92.744	ENSMAUG00000013994	Apex1	100	92.744	Mesocricetus_auratus
ENSMOCG00000013721	Apex1	100	92.453	ENSMICG00000043554	APEX1	100	92.453	Microcebus_murinus
ENSMOCG00000013721	Apex1	93	62.739	ENSMMOG00000010031	apex1	97	63.208	Mola_mola
ENSMOCG00000013721	Apex1	100	84.688	ENSMODG00000007125	APEX1	100	85.093	Monodelphis_domestica
ENSMOCG00000013721	Apex1	88	64.158	ENSMALG00000011699	apex1	79	62.585	Monopterus_albus
ENSMOCG00000013721	Apex1	99	95.253	MGP_CAROLIEiJ_G0019209	Apex1	100	94.915	Mus_caroli
ENSMOCG00000013721	Apex1	100	95.584	ENSMUSG00000035960	Apex1	100	95.584	Mus_musculus
ENSMOCG00000013721	Apex1	100	94.953	MGP_PahariEiJ_G0030232	Apex1	100	94.953	Mus_pahari
ENSMOCG00000013721	Apex1	100	95.584	MGP_SPRETEiJ_G0020101	Apex1	100	95.584	Mus_spretus
ENSMOCG00000013721	Apex1	100	92.500	ENSMLUG00000028957	APEX1	100	92.500	Myotis_lucifugus
ENSMOCG00000013721	Apex1	100	68.868	ENSNGAG00000021748	-	99	68.868	Nannospalax_galili
ENSMOCG00000013721	Apex1	100	93.082	ENSNGAG00000002725	-	100	93.082	Nannospalax_galili
ENSMOCG00000013721	Apex1	87	71.014	ENSNBRG00000005334	apex1	91	66.349	Neolamprologus_brichardi
ENSMOCG00000013721	Apex1	100	92.138	ENSNLEG00000010839	APEX1	100	92.138	Nomascus_leucogenys
ENSMOCG00000013721	Apex1	100	84.543	ENSMEUG00000014519	APEX1	100	84.543	Notamacropus_eugenii
ENSMOCG00000013721	Apex1	100	91.824	ENSOPRG00000014029	APEX1	100	91.824	Ochotona_princeps
ENSMOCG00000013721	Apex1	100	69.444	ENSODEG00000006583	-	100	69.444	Octodon_degus
ENSMOCG00000013721	Apex1	97	74.110	ENSODEG00000004777	-	99	74.110	Octodon_degus
ENSMOCG00000013721	Apex1	100	92.767	ENSODEG00000001703	-	100	92.767	Octodon_degus
ENSMOCG00000013721	Apex1	88	71.583	ENSONIG00000012089	apex1	99	66.984	Oreochromis_niloticus
ENSMOCG00000013721	Apex1	90	82.807	ENSOANG00000008836	APEX1	80	78.086	Ornithorhynchus_anatinus
ENSMOCG00000013721	Apex1	100	92.767	ENSOCUG00000005022	APEX1	100	92.767	Oryctolagus_cuniculus
ENSMOCG00000013721	Apex1	99	67.296	ENSORLG00000012378	apex1	99	67.296	Oryzias_latipes
ENSMOCG00000013721	Apex1	99	67.296	ENSORLG00020021371	apex1	99	67.296	Oryzias_latipes_hni
ENSMOCG00000013721	Apex1	99	67.296	ENSORLG00015020089	apex1	99	67.296	Oryzias_latipes_hsok
ENSMOCG00000013721	Apex1	99	66.667	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSMOCG00000013721	Apex1	100	93.396	ENSOGAG00000013335	-	100	93.396	Otolemur_garnettii
ENSMOCG00000013721	Apex1	98	82.692	ENSOGAG00000029355	-	100	82.692	Otolemur_garnettii
ENSMOCG00000013721	Apex1	97	87.662	ENSOARG00000001876	-	100	87.662	Ovis_aries
ENSMOCG00000013721	Apex1	100	90.252	ENSOARG00000019740	-	100	90.252	Ovis_aries
ENSMOCG00000013721	Apex1	99	77.707	ENSOARG00000014424	-	99	77.707	Ovis_aries
ENSMOCG00000013721	Apex1	100	92.453	ENSPPAG00000038760	APEX1	100	92.453	Pan_paniscus
ENSMOCG00000013721	Apex1	100	94.340	ENSPPRG00000011794	APEX1	100	94.340	Panthera_pardus
ENSMOCG00000013721	Apex1	100	94.025	ENSPTIG00000014829	APEX1	100	94.025	Panthera_tigris_altaica
ENSMOCG00000013721	Apex1	100	92.453	ENSPTRG00000006093	APEX1	100	92.453	Pan_troglodytes
ENSMOCG00000013721	Apex1	100	91.824	ENSPANG00000022757	APEX1	100	91.824	Papio_anubis
ENSMOCG00000013721	Apex1	87	67.870	ENSPKIG00000003504	apex1	100	63.354	Paramormyrops_kingsleyae
ENSMOCG00000013721	Apex1	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSMOCG00000013721	Apex1	100	96.845	ENSPEMG00000019097	Apex1	100	96.845	Peromyscus_maniculatus_bairdii
ENSMOCG00000013721	Apex1	95	65.116	ENSPMAG00000007275	-	100	65.116	Petromyzon_marinus
ENSMOCG00000013721	Apex1	100	84.326	ENSPCIG00000023274	APEX1	100	85.670	Phascolarctos_cinereus
ENSMOCG00000013721	Apex1	88	72.760	ENSPFOG00000004178	apex1	99	67.192	Poecilia_formosa
ENSMOCG00000013721	Apex1	88	72.401	ENSPLAG00000012779	apex1	99	67.192	Poecilia_latipinna
ENSMOCG00000013721	Apex1	88	72.760	ENSPMEG00000019623	apex1	99	67.192	Poecilia_mexicana
ENSMOCG00000013721	Apex1	88	72.043	ENSPREG00000014298	apex1	99	66.562	Poecilia_reticulata
ENSMOCG00000013721	Apex1	100	91.824	ENSPPYG00000005565	APEX1	100	91.824	Pongo_abelii
ENSMOCG00000013721	Apex1	100	89.623	ENSPCAG00000010376	APEX1	100	89.623	Procavia_capensis
ENSMOCG00000013721	Apex1	100	92.453	ENSPCOG00000021564	APEX1	100	92.453	Propithecus_coquereli
ENSMOCG00000013721	Apex1	100	92.500	ENSPVAG00000010736	APEX1	100	92.500	Pteropus_vampyrus
ENSMOCG00000013721	Apex1	87	71.377	ENSPNYG00000023940	apex1	99	66.667	Pundamilia_nyererei
ENSMOCG00000013721	Apex1	93	64.527	ENSPNAG00000020897	apex1	96	64.407	Pygocentrus_nattereri
ENSMOCG00000013721	Apex1	100	95.268	ENSRNOG00000009663	Apex1	100	95.268	Rattus_norvegicus
ENSMOCG00000013721	Apex1	100	92.453	ENSRBIG00000038325	APEX1	99	92.453	Rhinopithecus_bieti
ENSMOCG00000013721	Apex1	100	79.495	ENSSBOG00000031372	-	100	79.495	Saimiri_boliviensis_boliviensis
ENSMOCG00000013721	Apex1	100	93.082	ENSSBOG00000018921	-	100	93.082	Saimiri_boliviensis_boliviensis
ENSMOCG00000013721	Apex1	100	83.025	ENSSHAG00000013524	APEX1	100	83.436	Sarcophilus_harrisii
ENSMOCG00000013721	Apex1	100	62.461	ENSSFOG00015001948	apex1	100	62.461	Scleropages_formosus
ENSMOCG00000013721	Apex1	99	65.714	ENSSMAG00000013348	apex1	99	65.714	Scophthalmus_maximus
ENSMOCG00000013721	Apex1	99	66.032	ENSSDUG00000016377	apex1	99	66.032	Seriola_dumerili
ENSMOCG00000013721	Apex1	99	66.667	ENSSLDG00000023005	apex1	99	66.667	Seriola_lalandi_dorsalis
ENSMOCG00000013721	Apex1	92	71.672	ENSSPUG00000000531	APEX1	99	71.672	Sphenodon_punctatus
ENSMOCG00000013721	Apex1	99	65.714	ENSSPAG00000000458	apex1	99	65.714	Stegastes_partitus
ENSMOCG00000013721	Apex1	98	55.031	ENSSSCG00000039705	-	99	57.285	Sus_scrofa
ENSMOCG00000013721	Apex1	100	93.082	ENSSSCG00000040060	-	100	93.082	Sus_scrofa
ENSMOCG00000013721	Apex1	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSMOCG00000013721	Apex1	88	67.986	ENSTRUG00000004268	apex1	95	63.438	Takifugu_rubripes
ENSMOCG00000013721	Apex1	99	63.810	ENSTNIG00000005778	apex1	99	63.810	Tetraodon_nigroviridis
ENSMOCG00000013721	Apex1	100	88.365	ENSTBEG00000006405	APEX1	100	88.365	Tupaia_belangeri
ENSMOCG00000013721	Apex1	74	93.220	ENSTTRG00000007860	APEX1	100	93.220	Tursiops_truncatus
ENSMOCG00000013721	Apex1	100	93.711	ENSUAMG00000010457	APEX1	100	93.711	Ursus_americanus
ENSMOCG00000013721	Apex1	100	93.711	ENSUMAG00000009178	APEX1	100	93.711	Ursus_maritimus
ENSMOCG00000013721	Apex1	74	88.136	ENSVPAG00000005083	APEX1	100	88.136	Vicugna_pacos
ENSMOCG00000013721	Apex1	100	92.453	ENSVVUG00000009010	APEX1	100	92.453	Vulpes_vulpes
ENSMOCG00000013721	Apex1	100	65.625	ENSXETG00000024773	apex1	100	65.625	Xenopus_tropicalis
ENSMOCG00000013721	Apex1	88	72.401	ENSXCOG00000015233	apex1	99	66.877	Xiphophorus_couchianus
ENSMOCG00000013721	Apex1	94	68.078	ENSXMAG00000006195	apex1	99	66.877	Xiphophorus_maculatus