EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000014082 (Gene tree)
Gene ID: 101991071
Gene Symbol: Rpusd1
Alias: 2310051D06Rik
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 3646 bases
Position: chr7:2283715-2287360
Accession: 101991071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000014638	PseudoU_synth_2	PF00849.22	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000018398	-	1676	XM_005349090	ENSMOCP00000014638	306 (aa)	XP_005349147	UPI00038BFB9C

Gene Model

Click here to download ENSMOCG00000014082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000014082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000014082	Rpusd1	99	81.350	ENSG00000007376	RPUSD1	100	88.095	Homo_sapiens
ENSMOCG00000014082	Rpusd1	98	56.954	ENSAPOG00000022221	rpusd1	98	56.954	Acanthochromis_polyacanthus
ENSMOCG00000014082	Rpusd1	100	84.967	ENSAMEG00000007461	RPUSD1	100	84.314	Ailuropoda_melanoleuca
ENSMOCG00000014082	Rpusd1	98	57.190	ENSACIG00000015863	rpusd1	98	57.190	Amphilophus_citrinellus
ENSMOCG00000014082	Rpusd1	98	57.377	ENSAOCG00000021975	rpusd1	95	57.377	Amphiprion_ocellaris
ENSMOCG00000014082	Rpusd1	98	57.049	ENSAPEG00000001316	rpusd1	95	57.049	Amphiprion_percula
ENSMOCG00000014082	Rpusd1	83	64.032	ENSATEG00000002984	rpusd1	98	57.377	Anabas_testudineus
ENSMOCG00000014082	Rpusd1	78	60.081	ENSAPLG00000012316	RPUSD1	100	59.836	Anas_platyrhynchos
ENSMOCG00000014082	Rpusd1	99	68.506	ENSACAG00000008953	RPUSD1	100	68.506	Anolis_carolinensis
ENSMOCG00000014082	Rpusd1	99	82.637	ENSANAG00000024709	RPUSD1	99	83.601	Aotus_nancymaae
ENSMOCG00000014082	Rpusd1	98	58.632	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSMOCG00000014082	Rpusd1	99	58.746	ENSAMXG00000019802	rpusd1	100	58.746	Astyanax_mexicanus
ENSMOCG00000014082	Rpusd1	100	83.766	ENSBTAG00000000179	RPUSD1	100	85.065	Bos_taurus
ENSMOCG00000014082	Rpusd1	99	82.958	ENSCJAG00000012253	RPUSD1	99	83.280	Callithrix_jacchus
ENSMOCG00000014082	Rpusd1	99	84.262	ENSCAFG00000019614	RPUSD1	99	84.590	Canis_familiaris
ENSMOCG00000014082	Rpusd1	99	84.262	ENSCAFG00020008891	RPUSD1	99	84.590	Canis_lupus_dingo
ENSMOCG00000014082	Rpusd1	100	83.766	ENSCHIG00000012872	RPUSD1	100	85.065	Capra_hircus
ENSMOCG00000014082	Rpusd1	99	83.934	ENSTSYG00000036934	RPUSD1	99	83.442	Carlito_syrichta
ENSMOCG00000014082	Rpusd1	100	88.235	ENSCAPG00000014219	RPUSD1	100	88.235	Cavia_aperea
ENSMOCG00000014082	Rpusd1	100	88.235	ENSCPOG00000034604	RPUSD1	100	88.235	Cavia_porcellus
ENSMOCG00000014082	Rpusd1	99	83.280	ENSCCAG00000034385	RPUSD1	99	83.601	Cebus_capucinus
ENSMOCG00000014082	Rpusd1	99	82.958	ENSCATG00000042983	RPUSD1	99	83.280	Cercocebus_atys
ENSMOCG00000014082	Rpusd1	100	87.255	ENSCLAG00000013966	RPUSD1	100	87.255	Chinchilla_lanigera
ENSMOCG00000014082	Rpusd1	99	82.958	ENSCSAG00000012121	RPUSD1	99	83.280	Chlorocebus_sabaeus
ENSMOCG00000014082	Rpusd1	99	65.584	ENSCPBG00000021101	RPUSD1	99	66.118	Chrysemys_picta_bellii
ENSMOCG00000014082	Rpusd1	92	85.053	ENSCANG00000028576	RPUSD1	97	85.714	Colobus_angolensis_palliatus
ENSMOCG00000014082	Rpusd1	100	92.810	ENSCGRG00001014253	Rpusd1	100	92.810	Cricetulus_griseus_chok1gshd
ENSMOCG00000014082	Rpusd1	100	92.810	ENSCGRG00000017995	Rpusd1	100	92.810	Cricetulus_griseus_crigri
ENSMOCG00000014082	Rpusd1	99	55.375	ENSCSEG00000018512	rpusd1	100	55.776	Cynoglossus_semilaevis
ENSMOCG00000014082	Rpusd1	98	58.333	ENSCVAG00000022746	rpusd1	98	58.333	Cyprinodon_variegatus
ENSMOCG00000014082	Rpusd1	99	62.706	ENSDARG00000060192	rpusd1	100	62.706	Danio_rerio
ENSMOCG00000014082	Rpusd1	100	78.413	ENSDNOG00000003721	RPUSD1	100	78.730	Dasypus_novemcinctus
ENSMOCG00000014082	Rpusd1	100	86.928	ENSDORG00000026656	Rpusd1	100	86.601	Dipodomys_ordii
ENSMOCG00000014082	Rpusd1	99	45.141	ENSEBUG00000008767	rpusd1	94	45.597	Eptatretus_burgeri
ENSMOCG00000014082	Rpusd1	99	82.857	ENSEASG00005018421	RPUSD1	75	83.492	Equus_asinus_asinus
ENSMOCG00000014082	Rpusd1	83	59.843	ENSELUG00000014307	rpusd1	88	53.443	Esox_lucius
ENSMOCG00000014082	Rpusd1	100	82.026	ENSFCAG00000010359	RPUSD1	100	81.699	Felis_catus
ENSMOCG00000014082	Rpusd1	99	68.647	ENSFALG00000003211	RPUSD1	100	67.987	Ficedula_albicollis
ENSMOCG00000014082	Rpusd1	100	88.235	ENSFDAG00000013398	RPUSD1	100	88.235	Fukomys_damarensis
ENSMOCG00000014082	Rpusd1	98	57.426	ENSFHEG00000004736	rpusd1	98	57.426	Fundulus_heteroclitus
ENSMOCG00000014082	Rpusd1	83	62.055	ENSGMOG00000010756	rpusd1	98	54.605	Gadus_morhua
ENSMOCG00000014082	Rpusd1	99	66.557	ENSGALG00000005315	RPUSD1	100	66.230	Gallus_gallus
ENSMOCG00000014082	Rpusd1	98	59.000	ENSGAFG00000009886	rpusd1	98	59.000	Gambusia_affinis
ENSMOCG00000014082	Rpusd1	82	63.347	ENSGACG00000014276	rpusd1	97	56.766	Gasterosteus_aculeatus
ENSMOCG00000014082	Rpusd1	99	66.447	ENSGAGG00000004181	RPUSD1	99	66.118	Gopherus_agassizii
ENSMOCG00000014082	Rpusd1	99	81.029	ENSGGOG00000013997	RPUSD1	99	81.350	Gorilla_gorilla
ENSMOCG00000014082	Rpusd1	98	58.306	ENSHBUG00000023728	rpusd1	98	57.655	Haplochromis_burtoni
ENSMOCG00000014082	Rpusd1	100	87.908	ENSHGLG00000002595	RPUSD1	100	87.908	Heterocephalus_glaber_female
ENSMOCG00000014082	Rpusd1	100	87.908	ENSHGLG00100014303	RPUSD1	100	87.908	Heterocephalus_glaber_male
ENSMOCG00000014082	Rpusd1	98	57.096	ENSHCOG00000002390	rpusd1	99	56.811	Hippocampus_comes
ENSMOCG00000014082	Rpusd1	99	61.513	ENSIPUG00000001570	rpusd1	99	61.513	Ictalurus_punctatus
ENSMOCG00000014082	Rpusd1	100	88.235	ENSSTOG00000004276	RPUSD1	100	88.235	Ictidomys_tridecemlineatus
ENSMOCG00000014082	Rpusd1	100	91.176	ENSJJAG00000015696	Rpusd1	100	91.503	Jaculus_jaculus
ENSMOCG00000014082	Rpusd1	98	57.000	ENSKMAG00000017287	rpusd1	98	57.000	Kryptolebias_marmoratus
ENSMOCG00000014082	Rpusd1	98	56.393	ENSLBEG00000013354	RPUSD1	98	56.863	Labrus_bergylta
ENSMOCG00000014082	Rpusd1	98	56.393	ENSLBEG00000022502	rpusd1	98	56.863	Labrus_bergylta
ENSMOCG00000014082	Rpusd1	99	62.583	ENSLACG00000008869	RPUSD1	99	62.583	Latimeria_chalumnae
ENSMOCG00000014082	Rpusd1	71	73.611	ENSLOCG00000005682	rpusd1	99	73.611	Lepisosteus_oculatus
ENSMOCG00000014082	Rpusd1	100	82.353	ENSLAFG00000002115	RPUSD1	100	82.353	Loxodonta_africana
ENSMOCG00000014082	Rpusd1	99	83.280	ENSMFAG00000003961	RPUSD1	99	83.601	Macaca_fascicularis
ENSMOCG00000014082	Rpusd1	99	83.280	ENSMMUG00000000842	RPUSD1	99	83.601	Macaca_mulatta
ENSMOCG00000014082	Rpusd1	99	83.280	ENSMNEG00000042712	RPUSD1	99	83.601	Macaca_nemestrina
ENSMOCG00000014082	Rpusd1	99	83.280	ENSMLEG00000030591	RPUSD1	99	83.601	Mandrillus_leucophaeus
ENSMOCG00000014082	Rpusd1	83	64.822	ENSMAMG00000004735	rpusd1	98	58.170	Mastacembelus_armatus
ENSMOCG00000014082	Rpusd1	98	58.632	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSMOCG00000014082	Rpusd1	97	65.772	ENSMGAG00000005447	RPUSD1	99	65.772	Meleagris_gallopavo
ENSMOCG00000014082	Rpusd1	86	86.466	ENSMAUG00000019998	Rpusd1	100	86.466	Mesocricetus_auratus
ENSMOCG00000014082	Rpusd1	100	84.295	ENSMICG00000017561	RPUSD1	100	82.484	Microcebus_murinus
ENSMOCG00000014082	Rpusd1	98	57.333	ENSMMOG00000012569	rpusd1	99	57.667	Mola_mola
ENSMOCG00000014082	Rpusd1	100	71.613	ENSMODG00000016882	RPUSD1	100	70.968	Monodelphis_domestica
ENSMOCG00000014082	Rpusd1	98	56.863	ENSMALG00000017818	rpusd1	98	57.190	Monopterus_albus
ENSMOCG00000014082	Rpusd1	100	95.098	MGP_CAROLIEiJ_G0021244	Rpusd1	100	95.098	Mus_caroli
ENSMOCG00000014082	Rpusd1	100	95.752	ENSMUSG00000041199	Rpusd1	100	95.752	Mus_musculus
ENSMOCG00000014082	Rpusd1	100	93.182	MGP_PahariEiJ_G0023562	Rpusd1	99	94.098	Mus_pahari
ENSMOCG00000014082	Rpusd1	100	95.752	MGP_SPRETEiJ_G0022155	Rpusd1	100	95.752	Mus_spretus
ENSMOCG00000014082	Rpusd1	100	82.680	ENSMPUG00000015897	RPUSD1	100	83.660	Mustela_putorius_furo
ENSMOCG00000014082	Rpusd1	100	84.936	ENSMLUG00000001089	RPUSD1	100	85.577	Myotis_lucifugus
ENSMOCG00000014082	Rpusd1	100	91.503	ENSNGAG00000003595	Rpusd1	100	91.503	Nannospalax_galili
ENSMOCG00000014082	Rpusd1	98	59.000	ENSNBRG00000006457	rpusd1	98	59.000	Neolamprologus_brichardi
ENSMOCG00000014082	Rpusd1	55	77.011	ENSNLEG00000008424	-	99	76.437	Nomascus_leucogenys
ENSMOCG00000014082	Rpusd1	100	70.096	ENSMEUG00000016049	RPUSD1	100	70.588	Notamacropus_eugenii
ENSMOCG00000014082	Rpusd1	99	77.705	ENSOPRG00000008340	RPUSD1	99	77.303	Ochotona_princeps
ENSMOCG00000014082	Rpusd1	100	85.294	ENSODEG00000016945	RPUSD1	100	85.294	Octodon_degus
ENSMOCG00000014082	Rpusd1	98	57.980	ENSONIG00000015672	rpusd1	99	57.329	Oreochromis_niloticus
ENSMOCG00000014082	Rpusd1	99	58.609	ENSORLG00000013009	rpusd1	99	58.609	Oryzias_latipes
ENSMOCG00000014082	Rpusd1	99	58.278	ENSORLG00020010382	rpusd1	99	58.278	Oryzias_latipes_hni
ENSMOCG00000014082	Rpusd1	99	57.616	ENSORLG00015021354	rpusd1	99	57.616	Oryzias_latipes_hsok
ENSMOCG00000014082	Rpusd1	98	58.528	ENSOMEG00000021426	rpusd1	98	57.807	Oryzias_melastigma
ENSMOCG00000014082	Rpusd1	100	86.538	ENSOGAG00000003795	RPUSD1	100	85.897	Otolemur_garnettii
ENSMOCG00000014082	Rpusd1	100	83.442	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSMOCG00000014082	Rpusd1	99	81.029	ENSPPAG00000034797	RPUSD1	99	81.350	Pan_paniscus
ENSMOCG00000014082	Rpusd1	100	81.699	ENSPPRG00000012389	RPUSD1	100	80.906	Panthera_pardus
ENSMOCG00000014082	Rpusd1	100	81.373	ENSPTIG00000008545	RPUSD1	92	80.583	Panthera_tigris_altaica
ENSMOCG00000014082	Rpusd1	99	81.029	ENSPTRG00000007565	RPUSD1	99	81.350	Pan_troglodytes
ENSMOCG00000014082	Rpusd1	99	82.637	ENSPANG00000024401	RPUSD1	99	82.958	Papio_anubis
ENSMOCG00000014082	Rpusd1	99	58.974	ENSPKIG00000018890	rpusd1	91	59.539	Paramormyrops_kingsleyae
ENSMOCG00000014082	Rpusd1	99	67.647	ENSPSIG00000013945	RPUSD1	100	67.541	Pelodiscus_sinensis
ENSMOCG00000014082	Rpusd1	99	58.278	ENSPMGG00000014950	rpusd1	99	58.278	Periophthalmus_magnuspinnatus
ENSMOCG00000014082	Rpusd1	100	96.078	ENSPEMG00000000497	Rpusd1	100	96.078	Peromyscus_maniculatus_bairdii
ENSMOCG00000014082	Rpusd1	98	50.654	ENSPMAG00000001563	rpusd1	82	57.143	Petromyzon_marinus
ENSMOCG00000014082	Rpusd1	100	70.927	ENSPCIG00000021216	-	94	71.569	Phascolarctos_cinereus
ENSMOCG00000014082	Rpusd1	98	59.333	ENSPFOG00000007946	rpusd1	98	58.194	Poecilia_formosa
ENSMOCG00000014082	Rpusd1	98	59.333	ENSPLAG00000011925	rpusd1	98	58.194	Poecilia_latipinna
ENSMOCG00000014082	Rpusd1	98	59.000	ENSPMEG00000002910	rpusd1	98	57.860	Poecilia_mexicana
ENSMOCG00000014082	Rpusd1	98	59.667	ENSPREG00000019851	rpusd1	98	59.667	Poecilia_reticulata
ENSMOCG00000014082	Rpusd1	99	67.869	ENSPCAG00000002258	RPUSD1	99	67.869	Procavia_capensis
ENSMOCG00000014082	Rpusd1	100	85.897	ENSPCOG00000022582	RPUSD1	100	85.897	Propithecus_coquereli
ENSMOCG00000014082	Rpusd1	100	81.410	ENSPVAG00000013104	RPUSD1	100	81.731	Pteropus_vampyrus
ENSMOCG00000014082	Rpusd1	98	58.306	ENSPNYG00000024076	rpusd1	98	57.860	Pundamilia_nyererei
ENSMOCG00000014082	Rpusd1	99	58.086	ENSPNAG00000013806	rpusd1	100	58.086	Pygocentrus_nattereri
ENSMOCG00000014082	Rpusd1	100	93.464	ENSRNOG00000023639	Rpusd1	100	93.464	Rattus_norvegicus
ENSMOCG00000014082	Rpusd1	99	82.637	ENSRBIG00000030238	RPUSD1	99	82.958	Rhinopithecus_bieti
ENSMOCG00000014082	Rpusd1	99	82.637	ENSRROG00000036663	RPUSD1	99	82.958	Rhinopithecus_roxellana
ENSMOCG00000014082	Rpusd1	99	82.951	ENSSBOG00000033063	RPUSD1	99	83.279	Saimiri_boliviensis_boliviensis
ENSMOCG00000014082	Rpusd1	100	70.288	ENSSHAG00000013500	RPUSD1	100	70.915	Sarcophilus_harrisii
ENSMOCG00000014082	Rpusd1	99	60.927	ENSSFOG00015014394	rpusd1	99	60.927	Scleropages_formosus
ENSMOCG00000014082	Rpusd1	98	57.377	ENSSMAG00000008045	rpusd1	91	57.377	Scophthalmus_maximus
ENSMOCG00000014082	Rpusd1	83	65.613	ENSSDUG00000001829	rpusd1	95	58.689	Seriola_dumerili
ENSMOCG00000014082	Rpusd1	83	65.613	ENSSLDG00000020853	rpusd1	95	58.689	Seriola_lalandi_dorsalis
ENSMOCG00000014082	Rpusd1	55	89.222	ENSSARG00000011187	-	100	89.222	Sorex_araneus
ENSMOCG00000014082	Rpusd1	63	55.155	ENSSPUG00000005119	-	100	55.155	Sphenodon_punctatus
ENSMOCG00000014082	Rpusd1	98	58.361	ENSSPAG00000012708	rpusd1	98	58.361	Stegastes_partitus
ENSMOCG00000014082	Rpusd1	100	83.974	ENSSSCG00000008000	RPUSD1	98	88.976	Sus_scrofa
ENSMOCG00000014082	Rpusd1	83	75.294	ENSTGUG00000015375	RPUSD1	100	75.294	Taeniopygia_guttata
ENSMOCG00000014082	Rpusd1	98	56.863	ENSTRUG00000003041	rpusd1	98	57.190	Takifugu_rubripes
ENSMOCG00000014082	Rpusd1	98	54.333	ENSTNIG00000002660	rpusd1	99	54.333	Tetraodon_nigroviridis
ENSMOCG00000014082	Rpusd1	100	84.936	ENSTTRG00000010167	RPUSD1	100	83.974	Tursiops_truncatus
ENSMOCG00000014082	Rpusd1	100	84.314	ENSUAMG00000012736	RPUSD1	100	84.641	Ursus_americanus
ENSMOCG00000014082	Rpusd1	100	84.314	ENSUMAG00000021174	RPUSD1	100	84.641	Ursus_maritimus
ENSMOCG00000014082	Rpusd1	99	84.262	ENSVVUG00000012357	RPUSD1	99	83.607	Vulpes_vulpes
ENSMOCG00000014082	Rpusd1	100	61.438	ENSXETG00000007184	rpusd1	100	61.093	Xenopus_tropicalis
ENSMOCG00000014082	Rpusd1	98	58.667	ENSXCOG00000017930	rpusd1	98	58.667	Xiphophorus_couchianus
ENSMOCG00000014082	Rpusd1	98	59.000	ENSXMAG00000024084	rpusd1	98	59.000	Xiphophorus_maculatus