EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000014155 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 3B subunit 4 pseudogene
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 1234 bases
Position: chr2:15395765-15396998
Accession: 101991221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000014753	RRM_1	PF00076.22	6.4e-39	1	2
ENSMOCP00000014753	RRM_1	PF00076.22	6.4e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000018514	-	1215	-	ENSMOCP00000014753	404 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000014155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000014155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000014155	-	73	38.065	ENSMOCG00000018191	-	60	38.065
ENSMOCG00000014155	-	100	94.699	ENSMOCG00000013658	-	98	94.699
ENSMOCG00000014155	-	74	37.705	ENSMOCG00000004921	-	57	37.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000014155	-	100	94.458	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSMOCG00000014155	-	57	94.372	ENSAPOG00000017647	sf3b4	92	74.607	Acanthochromis_polyacanthus
ENSMOCG00000014155	-	100	94.699	ENSAMEG00000010073	SF3B4	98	94.699	Ailuropoda_melanoleuca
ENSMOCG00000014155	-	54	94.064	ENSACIG00000018455	sf3b4	60	97.525	Amphilophus_citrinellus
ENSMOCG00000014155	-	57	94.372	ENSAOCG00000019801	sf3b4	92	74.607	Amphiprion_ocellaris
ENSMOCG00000014155	-	57	94.372	ENSAPEG00000010365	sf3b4	92	74.607	Amphiprion_percula
ENSMOCG00000014155	-	57	93.939	ENSATEG00000012844	sf3b4	92	72.165	Anabas_testudineus
ENSMOCG00000014155	-	63	93.701	ENSACAG00000010019	SF3B4	92	81.654	Anolis_carolinensis
ENSMOCG00000014155	-	100	94.458	ENSANAG00000031025	SF3B4	98	94.458	Aotus_nancymaae
ENSMOCG00000014155	-	57	93.506	ENSACLG00000014260	sf3b4	92	72.093	Astatotilapia_calliptera
ENSMOCG00000014155	-	57	93.939	ENSAMXG00000008282	sf3b4	92	74.607	Astyanax_mexicanus
ENSMOCG00000014155	-	74	94.966	ENSBTAG00000012793	-	91	91.622	Bos_taurus
ENSMOCG00000014155	-	100	94.699	ENSBTAG00000012495	SF3B4	98	94.699	Bos_taurus
ENSMOCG00000014155	-	53	77.674	WBGene00004723	sap-49	53	80.000	Caenorhabditis_elegans
ENSMOCG00000014155	-	77	73.707	ENSCJAG00000042351	SF3B4	98	76.807	Callithrix_jacchus
ENSMOCG00000014155	-	100	94.458	ENSCAFG00000011617	SF3B4	98	94.458	Canis_familiaris
ENSMOCG00000014155	-	100	94.458	ENSCAFG00020019775	SF3B4	98	94.458	Canis_lupus_dingo
ENSMOCG00000014155	-	100	94.699	ENSCHIG00000025663	-	98	94.699	Capra_hircus
ENSMOCG00000014155	-	100	94.458	ENSTSYG00000009295	SF3B4	98	94.458	Carlito_syrichta
ENSMOCG00000014155	-	100	94.458	ENSCPOG00000008267	SF3B4	98	94.458	Cavia_porcellus
ENSMOCG00000014155	-	97	81.592	ENSCCAG00000019823	-	89	82.322	Cebus_capucinus
ENSMOCG00000014155	-	78	90.794	ENSCCAG00000021751	-	67	90.794	Cebus_capucinus
ENSMOCG00000014155	-	100	94.458	ENSCATG00000033114	SF3B4	98	94.458	Cercocebus_atys
ENSMOCG00000014155	-	100	94.458	ENSCLAG00000015851	SF3B4	98	94.458	Chinchilla_lanigera
ENSMOCG00000014155	-	100	94.458	ENSCSAG00000018129	SF3B4	98	94.458	Chlorocebus_sabaeus
ENSMOCG00000014155	-	99	80.622	ENSCPBG00000008041	SF3B4	92	80.206	Chrysemys_picta_bellii
ENSMOCG00000014155	-	51	88.293	ENSCING00000002337	-	55	88.293	Ciona_intestinalis
ENSMOCG00000014155	-	50	88.571	ENSCSAVG00000007809	-	89	87.500	Ciona_savignyi
ENSMOCG00000014155	-	100	94.458	ENSCANG00000035579	SF3B4	98	94.458	Colobus_angolensis_palliatus
ENSMOCG00000014155	-	100	94.940	ENSCGRG00001003590	Sf3b4	98	94.940	Cricetulus_griseus_chok1gshd
ENSMOCG00000014155	-	100	94.940	ENSCGRG00000016914	Sf3b4	98	94.940	Cricetulus_griseus_crigri
ENSMOCG00000014155	-	63	85.115	ENSCVAG00000005536	sf3b4	53	98.049	Cyprinodon_variegatus
ENSMOCG00000014155	-	57	93.939	ENSDARG00000018574	sf3b4	92	75.131	Danio_rerio
ENSMOCG00000014155	-	77	94.212	ENSDNOG00000048908	-	99	91.505	Dasypus_novemcinctus
ENSMOCG00000014155	-	99	77.805	ENSDNOG00000037231	-	50	86.224	Dasypus_novemcinctus
ENSMOCG00000014155	-	100	94.699	ENSDORG00000016366	Sf3b4	98	94.699	Dipodomys_ordii
ENSMOCG00000014155	-	78	89.524	ENSETEG00000008963	SF3B4	98	87.229	Echinops_telfairi
ENSMOCG00000014155	-	100	94.699	ENSEASG00005001477	SF3B4	98	94.699	Equus_asinus_asinus
ENSMOCG00000014155	-	100	94.699	ENSECAG00000024737	SF3B4	98	94.699	Equus_caballus
ENSMOCG00000014155	-	57	94.805	ENSELUG00000012876	sf3b4	57	94.805	Esox_lucius
ENSMOCG00000014155	-	100	94.699	ENSFCAG00000010106	SF3B4	98	94.699	Felis_catus
ENSMOCG00000014155	-	100	94.458	ENSFDAG00000009286	SF3B4	98	94.458	Fukomys_damarensis
ENSMOCG00000014155	-	99	79.376	ENSGALG00000013352	SF3B4	92	79.381	Gallus_gallus
ENSMOCG00000014155	-	63	89.844	ENSGAFG00000010181	sf3b4	52	98.049	Gambusia_affinis
ENSMOCG00000014155	-	99	80.861	ENSGAGG00000025055	SF3B4	81	79.949	Gopherus_agassizii
ENSMOCG00000014155	-	100	73.515	ENSGGOG00000038845	-	53	87.317	Gorilla_gorilla
ENSMOCG00000014155	-	100	94.458	ENSGGOG00000004761	SF3B4	98	94.458	Gorilla_gorilla
ENSMOCG00000014155	-	57	93.506	ENSHBUG00000002028	sf3b4	92	72.093	Haplochromis_burtoni
ENSMOCG00000014155	-	100	94.458	ENSHGLG00000012360	SF3B4	98	94.458	Heterocephalus_glaber_female
ENSMOCG00000014155	-	100	93.494	ENSHGLG00100008533	SF3B4	98	93.494	Heterocephalus_glaber_male
ENSMOCG00000014155	-	57	94.372	ENSIPUG00000012242	Sf3b4	92	73.615	Ictalurus_punctatus
ENSMOCG00000014155	-	100	94.699	ENSSTOG00000000684	-	98	94.699	Ictidomys_tridecemlineatus
ENSMOCG00000014155	-	56	93.860	ENSKMAG00000008154	sf3b4	52	98.049	Kryptolebias_marmoratus
ENSMOCG00000014155	-	55	95.089	ENSLBEG00000026818	sf3b4	51	98.049	Labrus_bergylta
ENSMOCG00000014155	-	63	91.732	ENSLACG00000004436	SF3B4	85	83.923	Latimeria_chalumnae
ENSMOCG00000014155	-	55	95.067	ENSLOCG00000009048	sf3b4	91	74.425	Lepisosteus_oculatus
ENSMOCG00000014155	-	100	94.231	ENSLAFG00000008531	SF3B4	98	94.231	Loxodonta_africana
ENSMOCG00000014155	-	100	94.458	ENSMFAG00000042395	SF3B4	98	94.458	Macaca_fascicularis
ENSMOCG00000014155	-	94	66.752	ENSMFAG00000039067	-	91	68.871	Macaca_fascicularis
ENSMOCG00000014155	-	100	94.458	ENSMMUG00000007256	SF3B4	98	94.458	Macaca_mulatta
ENSMOCG00000014155	-	94	66.240	ENSMNEG00000031526	-	91	68.320	Macaca_nemestrina
ENSMOCG00000014155	-	100	94.458	ENSMNEG00000031839	SF3B4	98	94.458	Macaca_nemestrina
ENSMOCG00000014155	-	100	94.458	ENSMLEG00000038667	SF3B4	98	94.458	Mandrillus_leucophaeus
ENSMOCG00000014155	-	57	94.805	ENSMAMG00000014692	sf3b4	93	72.564	Mastacembelus_armatus
ENSMOCG00000014155	-	57	93.506	ENSMZEG00005026741	sf3b4	92	72.093	Maylandia_zebra
ENSMOCG00000014155	-	99	77.458	ENSMGAG00000000653	SF3B4	92	77.320	Meleagris_gallopavo
ENSMOCG00000014155	-	100	94.940	ENSMAUG00000015266	Sf3b4	98	94.940	Mesocricetus_auratus
ENSMOCG00000014155	-	100	94.699	ENSMICG00000044961	SF3B4	98	94.699	Microcebus_murinus
ENSMOCG00000014155	-	100	93.976	ENSMODG00000018767	SF3B4	98	93.976	Monodelphis_domestica
ENSMOCG00000014155	-	54	95.413	ENSMALG00000006174	sf3b4	51	98.049	Monopterus_albus
ENSMOCG00000014155	-	100	94.699	MGP_CAROLIEiJ_G0025365	Sf3b4	98	94.699	Mus_caroli
ENSMOCG00000014155	-	100	94.940	ENSMUSG00000068856	Sf3b4	98	94.940	Mus_musculus
ENSMOCG00000014155	-	100	94.940	MGP_PahariEiJ_G0026809	Sf3b4	98	94.940	Mus_pahari
ENSMOCG00000014155	-	100	94.940	MGP_SPRETEiJ_G0026309	Sf3b4	98	94.940	Mus_spretus
ENSMOCG00000014155	-	100	94.699	ENSMPUG00000005563	SF3B4	98	94.699	Mustela_putorius_furo
ENSMOCG00000014155	-	100	94.458	ENSMLUG00000010789	SF3B4	98	94.458	Myotis_lucifugus
ENSMOCG00000014155	-	100	94.699	ENSNGAG00000016337	Sf3b4	98	94.699	Nannospalax_galili
ENSMOCG00000014155	-	57	93.939	ENSNBRG00000013865	sf3b4	92	72.351	Neolamprologus_brichardi
ENSMOCG00000014155	-	100	74.390	ENSNLEG00000000537	-	93	77.657	Nomascus_leucogenys
ENSMOCG00000014155	-	100	62.651	ENSNLEG00000009693	-	97	65.783	Nomascus_leucogenys
ENSMOCG00000014155	-	71	99.355	ENSMEUG00000003272	SF3B4	68	99.355	Notamacropus_eugenii
ENSMOCG00000014155	-	76	84.740	ENSODEG00000003597	-	77	84.740	Octodon_degus
ENSMOCG00000014155	-	56	92.982	ENSONIG00000002730	sf3b4	51	98.049	Oreochromis_niloticus
ENSMOCG00000014155	-	100	94.699	ENSOCUG00000004614	SF3B4	98	94.699	Oryctolagus_cuniculus
ENSMOCG00000014155	-	55	94.619	ENSORLG00000003062	sf3b4	53	98.049	Oryzias_latipes
ENSMOCG00000014155	-	100	94.699	ENSOGAG00000006265	SF3B4	98	94.699	Otolemur_garnettii
ENSMOCG00000014155	-	86	77.401	ENSOARG00000007368	-	50	81.951	Ovis_aries
ENSMOCG00000014155	-	100	94.699	ENSOARG00000020718	-	98	94.699	Ovis_aries
ENSMOCG00000014155	-	100	94.458	ENSPPAG00000040904	SF3B4	98	94.458	Pan_paniscus
ENSMOCG00000014155	-	100	80.941	ENSPPAG00000030024	-	91	72.613	Pan_paniscus
ENSMOCG00000014155	-	100	94.699	ENSPPRG00000007384	SF3B4	98	94.699	Panthera_pardus
ENSMOCG00000014155	-	100	94.217	ENSPTIG00000014530	SF3B4	98	94.217	Panthera_tigris_altaica
ENSMOCG00000014155	-	100	94.458	ENSPTRG00000001243	SF3B4	98	94.458	Pan_troglodytes
ENSMOCG00000014155	-	100	78.218	ENSPTRG00000049727	-	91	71.859	Pan_troglodytes
ENSMOCG00000014155	-	100	94.458	ENSPANG00000005126	SF3B4	98	94.458	Papio_anubis
ENSMOCG00000014155	-	55	95.089	ENSPKIG00000020669	sf3b4	54	98.049	Paramormyrops_kingsleyae
ENSMOCG00000014155	-	69	74.368	ENSPSIG00000009565	SF3B4	63	97.661	Pelodiscus_sinensis
ENSMOCG00000014155	-	100	94.940	ENSPEMG00000017568	Sf3b4	98	94.940	Peromyscus_maniculatus_bairdii
ENSMOCG00000014155	-	100	93.976	ENSPCIG00000008765	SF3B4	98	93.976	Phascolarctos_cinereus
ENSMOCG00000014155	-	65	88.593	ENSPFOG00000005754	sf3b4	52	98.049	Poecilia_formosa
ENSMOCG00000014155	-	65	88.258	ENSPLAG00000001401	sf3b4	57	98.049	Poecilia_latipinna
ENSMOCG00000014155	-	65	88.593	ENSPREG00000011076	sf3b4	51	98.049	Poecilia_reticulata
ENSMOCG00000014155	-	62	97.449	ENSPCAG00000000392	SF3B4	65	97.449	Procavia_capensis
ENSMOCG00000014155	-	100	94.699	ENSPCOG00000015399	SF3B4	98	94.699	Propithecus_coquereli
ENSMOCG00000014155	-	100	94.699	ENSPVAG00000014171	SF3B4	98	94.699	Pteropus_vampyrus
ENSMOCG00000014155	-	57	93.506	ENSPNYG00000012700	sf3b4	92	72.093	Pundamilia_nyererei
ENSMOCG00000014155	-	57	94.372	ENSPNAG00000000686	sf3b4	92	73.037	Pygocentrus_nattereri
ENSMOCG00000014155	-	100	94.940	ENSRNOG00000021181	Sf3b4	98	94.940	Rattus_norvegicus
ENSMOCG00000014155	-	100	94.458	ENSRBIG00000043392	SF3B4	98	94.458	Rhinopithecus_bieti
ENSMOCG00000014155	-	93	69.841	ENSRROG00000028213	-	51	74.146	Rhinopithecus_roxellana
ENSMOCG00000014155	-	100	94.458	ENSRROG00000029366	SF3B4	98	94.458	Rhinopithecus_roxellana
ENSMOCG00000014155	-	100	69.704	ENSSBOG00000025174	-	72	77.955	Saimiri_boliviensis_boliviensis
ENSMOCG00000014155	-	100	94.217	ENSSBOG00000012310	-	98	94.217	Saimiri_boliviensis_boliviensis
ENSMOCG00000014155	-	97	93.548	ENSSHAG00000004043	SF3B4	100	92.126	Sarcophilus_harrisii
ENSMOCG00000014155	-	56	94.298	ENSSFOG00015008864	sf3b4	50	98.049	Scleropages_formosus
ENSMOCG00000014155	-	57	94.372	ENSSMAG00000006837	sf3b4	92	71.244	Scophthalmus_maximus
ENSMOCG00000014155	-	57	94.805	ENSSDUG00000012064	sf3b4	92	72.308	Seriola_dumerili
ENSMOCG00000014155	-	57	94.805	ENSSLDG00000014226	sf3b4	92	70.051	Seriola_lalandi_dorsalis
ENSMOCG00000014155	-	76	92.797	ENSSPUG00000001028	SF3B4	51	98.049	Sphenodon_punctatus
ENSMOCG00000014155	-	57	95.238	ENSSPAG00000019219	sf3b4	92	74.674	Stegastes_partitus
ENSMOCG00000014155	-	100	94.458	ENSSSCG00000006665	-	98	94.458	Sus_scrofa
ENSMOCG00000014155	-	89	63.333	ENSSSCG00000039440	-	81	61.818	Sus_scrofa
ENSMOCG00000014155	-	56	94.714	ENSTGUG00000004470	SF3B4	81	98.049	Taeniopygia_guttata
ENSMOCG00000014155	-	54	94.954	ENSTRUG00000004516	sf3b4	52	98.049	Takifugu_rubripes
ENSMOCG00000014155	-	100	94.699	ENSTTRG00000005217	SF3B4	98	94.699	Tursiops_truncatus
ENSMOCG00000014155	-	100	94.699	ENSUAMG00000022468	SF3B4	98	94.699	Ursus_americanus
ENSMOCG00000014155	-	100	94.217	ENSUMAG00000003802	SF3B4	98	94.217	Ursus_maritimus
ENSMOCG00000014155	-	99	94.660	ENSVPAG00000008152	SF3B4	100	94.660	Vicugna_pacos
ENSMOCG00000014155	-	77	96.774	ENSVVUG00000007732	-	92	89.125	Vulpes_vulpes
ENSMOCG00000014155	-	63	94.882	ENSVVUG00000022697	-	53	94.882	Vulpes_vulpes
ENSMOCG00000014155	-	56	92.478	ENSXETG00000011038	sf3b4	54	98.030	Xenopus_tropicalis
ENSMOCG00000014155	-	55	95.023	ENSXCOG00000019895	sf3b4	52	98.049	Xiphophorus_couchianus
ENSMOCG00000014155	-	55	95.023	ENSXMAG00000003772	sf3b4	52	98.049	Xiphophorus_maculatus