EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000014291 (Gene tree)
Gene ID: 101980954
Gene Symbol: Trub2
Alias: G430055L02Rik
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 31271 bases
Position: chr4:47330879-47362149
Accession: 101980954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000014949	TruB_N	PF01509.18	7.6e-29	1	1
ENSMOCP00000014953	TruB_N	PF01509.18	5.1e-16	1	1
ENSMOCP00000014961	TruB_N	PF01509.18	5.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000018717	-	615	-	ENSMOCP00000014953	204 (aa)	-	-
ENSMOCT00000018725	-	585	-	ENSMOCP00000014961	194 (aa)	-	-
ENSMOCT00000018713	-	1643	XM_005346167	ENSMOCP00000014949	303 (aa)	XP_005346224	UPI00067CFB8E

Gene Model

Click here to download ENSMOCG00000014291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000014291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000014291	Trub2	65	34.171	ENSMOCG00000017759	Trub1	59	34.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000014291	Trub2	99	84.053	ENSG00000167112	TRUB2	91	84.053	Homo_sapiens
ENSMOCG00000014291	Trub2	68	55.610	ENSAPOG00000015733	trub2	74	55.610	Acanthochromis_polyacanthus
ENSMOCG00000014291	Trub2	91	43.885	ENSAPOG00000018284	-	76	58.394	Acanthochromis_polyacanthus
ENSMOCG00000014291	Trub2	99	83.721	ENSAMEG00000015395	TRUB2	91	83.721	Ailuropoda_melanoleuca
ENSMOCG00000014291	Trub2	91	52.878	ENSACIG00000016500	trub2	84	52.878	Amphilophus_citrinellus
ENSMOCG00000014291	Trub2	91	54.676	ENSAOCG00000002330	trub2	82	54.676	Amphiprion_ocellaris
ENSMOCG00000014291	Trub2	91	55.036	ENSAPEG00000013177	trub2	82	55.036	Amphiprion_percula
ENSMOCG00000014291	Trub2	97	51.701	ENSATEG00000011371	trub2	92	51.701	Anabas_testudineus
ENSMOCG00000014291	Trub2	97	57.483	ENSAPLG00000009254	TRUB2	95	57.966	Anas_platyrhynchos
ENSMOCG00000014291	Trub2	96	64.041	ENSACAG00000007331	TRUB2	89	64.041	Anolis_carolinensis
ENSMOCG00000014291	Trub2	99	84.718	ENSANAG00000036234	TRUB2	97	84.718	Aotus_nancymaae
ENSMOCG00000014291	Trub2	91	53.597	ENSACLG00000010793	trub2	84	53.597	Astatotilapia_calliptera
ENSMOCG00000014291	Trub2	96	53.925	ENSAMXG00000031679	trub2	83	53.925	Astyanax_mexicanus
ENSMOCG00000014291	Trub2	85	81.707	ENSBTAG00000004663	TRUB2	100	81.707	Bos_taurus
ENSMOCG00000014291	Trub2	99	85.714	ENSCJAG00000020009	TRUB2	91	85.714	Callithrix_jacchus
ENSMOCG00000014291	Trub2	100	83.828	ENSCAFG00000020068	TRUB2	92	83.828	Canis_familiaris
ENSMOCG00000014291	Trub2	92	82.022	ENSCAFG00020017325	-	100	82.584	Canis_lupus_dingo
ENSMOCG00000014291	Trub2	99	85.953	ENSCHIG00000021160	TRUB2	90	85.953	Capra_hircus
ENSMOCG00000014291	Trub2	99	87.375	ENSTSYG00000034163	TRUB2	91	87.375	Carlito_syrichta
ENSMOCG00000014291	Trub2	86	86.641	ENSCAPG00000000223	TRUB2	90	86.620	Cavia_aperea
ENSMOCG00000014291	Trub2	99	86.288	ENSCPOG00000013535	TRUB2	92	86.034	Cavia_porcellus
ENSMOCG00000014291	Trub2	97	81.695	ENSCCAG00000028463	-	89	81.695	Cebus_capucinus
ENSMOCG00000014291	Trub2	99	84.385	ENSCCAG00000026531	-	92	84.385	Cebus_capucinus
ENSMOCG00000014291	Trub2	98	85.570	ENSCATG00000038234	TRUB2	90	85.570	Cercocebus_atys
ENSMOCG00000014291	Trub2	99	86.957	ENSCLAG00000001702	TRUB2	91	86.957	Chinchilla_lanigera
ENSMOCG00000014291	Trub2	98	80.936	ENSCSAG00000014117	TRUB2	90	80.936	Chlorocebus_sabaeus
ENSMOCG00000014291	Trub2	99	84.950	ENSCHOG00000001555	TRUB2	90	84.950	Choloepus_hoffmanni
ENSMOCG00000014291	Trub2	98	63.300	ENSCPBG00000025186	TRUB2	87	63.300	Chrysemys_picta_bellii
ENSMOCG00000014291	Trub2	95	31.741	ENSCSAVG00000003930	-	90	31.741	Ciona_savignyi
ENSMOCG00000014291	Trub2	98	77.517	ENSCANG00000016135	TRUB2	89	77.517	Colobus_angolensis_palliatus
ENSMOCG00000014291	Trub2	100	91.176	ENSCGRG00001024441	Trub2	100	91.176	Cricetulus_griseus_chok1gshd
ENSMOCG00000014291	Trub2	100	90.820	ENSCGRG00000005633	Trub2	92	90.820	Cricetulus_griseus_crigri
ENSMOCG00000014291	Trub2	96	51.178	ENSCSEG00000001331	trub2	89	51.178	Cynoglossus_semilaevis
ENSMOCG00000014291	Trub2	91	53.261	ENSCVAG00000009901	trub2	83	53.261	Cyprinodon_variegatus
ENSMOCG00000014291	Trub2	95	50.538	ENSDARG00000028379	trub2	79	52.878	Danio_rerio
ENSMOCG00000014291	Trub2	84	63.529	ENSDNOG00000043967	-	78	63.529	Dasypus_novemcinctus
ENSMOCG00000014291	Trub2	99	84.281	ENSDNOG00000045679	-	90	84.281	Dasypus_novemcinctus
ENSMOCG00000014291	Trub2	99	85.284	ENSDORG00000016222	Trub2	94	85.284	Dipodomys_ordii
ENSMOCG00000014291	Trub2	96	33.113	FBgn0033060	CG7849	94	33.113	Drosophila_melanogaster
ENSMOCG00000014291	Trub2	98	82.215	ENSETEG00000009114	TRUB2	92	82.215	Echinops_telfairi
ENSMOCG00000014291	Trub2	87	36.464	ENSEBUG00000015723	trub2	82	49.254	Eptatretus_burgeri
ENSMOCG00000014291	Trub2	99	84.950	ENSEASG00005016819	TRUB2	90	84.950	Equus_asinus_asinus
ENSMOCG00000014291	Trub2	99	85.619	ENSECAG00000023520	TRUB2	90	85.619	Equus_caballus
ENSMOCG00000014291	Trub2	99	86.000	ENSEEUG00000008908	TRUB2	91	86.000	Erinaceus_europaeus
ENSMOCG00000014291	Trub2	91	53.952	ENSELUG00000002376	trub2	91	53.952	Esox_lucius
ENSMOCG00000014291	Trub2	98	84.667	ENSFCAG00000005839	TRUB2	93	84.667	Felis_catus
ENSMOCG00000014291	Trub2	88	61.567	ENSFALG00000001364	TRUB2	86	62.313	Ficedula_albicollis
ENSMOCG00000014291	Trub2	99	85.619	ENSFDAG00000021374	TRUB2	90	85.619	Fukomys_damarensis
ENSMOCG00000014291	Trub2	94	48.611	ENSFHEG00000014655	trub2	85	48.611	Fundulus_heteroclitus
ENSMOCG00000014291	Trub2	91	45.290	ENSGMOG00000000981	trub2	92	45.290	Gadus_morhua
ENSMOCG00000014291	Trub2	98	61.745	ENSGALG00000004920	TRUB2	73	61.745	Gallus_gallus
ENSMOCG00000014291	Trub2	91	53.957	ENSGAFG00000010107	trub2	84	53.004	Gambusia_affinis
ENSMOCG00000014291	Trub2	98	52.685	ENSGACG00000001476	trub2	88	52.685	Gasterosteus_aculeatus
ENSMOCG00000014291	Trub2	96	66.207	ENSGAGG00000022872	TRUB2	86	66.207	Gopherus_agassizii
ENSMOCG00000014291	Trub2	99	84.385	ENSGGOG00000014780	TRUB2	91	84.385	Gorilla_gorilla
ENSMOCG00000014291	Trub2	91	54.317	ENSHBUG00000022384	trub2	84	54.317	Haplochromis_burtoni
ENSMOCG00000014291	Trub2	99	84.950	ENSHGLG00000016715	TRUB2	90	84.950	Heterocephalus_glaber_female
ENSMOCG00000014291	Trub2	99	84.950	ENSHGLG00100016548	TRUB2	90	84.950	Heterocephalus_glaber_male
ENSMOCG00000014291	Trub2	91	55.036	ENSHCOG00000017748	trub2	85	55.036	Hippocampus_comes
ENSMOCG00000014291	Trub2	96	51.877	ENSIPUG00000017725	hdhd3	51	51.877	Ictalurus_punctatus
ENSMOCG00000014291	Trub2	99	85.953	ENSSTOG00000008024	-	90	85.953	Ictidomys_tridecemlineatus
ENSMOCG00000014291	Trub2	98	86.957	ENSSTOG00000022617	-	91	86.957	Ictidomys_tridecemlineatus
ENSMOCG00000014291	Trub2	99	80.066	ENSJJAG00000019181	Trub2	90	80.066	Jaculus_jaculus
ENSMOCG00000014291	Trub2	91	53.791	ENSKMAG00000007861	trub2	83	53.791	Kryptolebias_marmoratus
ENSMOCG00000014291	Trub2	92	53.214	ENSLBEG00000000907	trub2	83	53.214	Labrus_bergylta
ENSMOCG00000014291	Trub2	94	63.287	ENSLACG00000001515	TRUB2	85	63.287	Latimeria_chalumnae
ENSMOCG00000014291	Trub2	95	57.192	ENSLOCG00000000885	trub2	96	57.192	Lepisosteus_oculatus
ENSMOCG00000014291	Trub2	99	85.284	ENSLAFG00000002174	TRUB2	99	85.284	Loxodonta_africana
ENSMOCG00000014291	Trub2	98	85.235	ENSMFAG00000000881	TRUB2	90	85.235	Macaca_fascicularis
ENSMOCG00000014291	Trub2	98	85.235	ENSMMUG00000014146	TRUB2	90	85.235	Macaca_mulatta
ENSMOCG00000014291	Trub2	98	84.899	ENSMNEG00000011189	TRUB2	90	84.899	Macaca_nemestrina
ENSMOCG00000014291	Trub2	98	85.570	ENSMLEG00000037270	TRUB2	90	85.570	Mandrillus_leucophaeus
ENSMOCG00000014291	Trub2	91	55.556	ENSMAMG00000023643	trub2	92	55.556	Mastacembelus_armatus
ENSMOCG00000014291	Trub2	91	53.957	ENSMZEG00005016018	trub2	84	53.957	Maylandia_zebra
ENSMOCG00000014291	Trub2	66	66.332	ENSMGAG00000003894	TRUB2	99	66.332	Meleagris_gallopavo
ENSMOCG00000014291	Trub2	100	93.814	ENSMAUG00000010403	Trub2	100	93.137	Mesocricetus_auratus
ENSMOCG00000014291	Trub2	99	84.718	ENSMICG00000047032	TRUB2	91	84.718	Microcebus_murinus
ENSMOCG00000014291	Trub2	96	51.064	ENSMMOG00000021674	trub2	86	55.396	Mola_mola
ENSMOCG00000014291	Trub2	96	73.630	ENSMODG00000005940	TRUB2	99	73.630	Monodelphis_domestica
ENSMOCG00000014291	Trub2	91	55.516	ENSMALG00000021231	trub2	83	55.516	Monopterus_albus
ENSMOCG00000014291	Trub2	100	91.148	MGP_CAROLIEiJ_G0023368	Trub2	100	87.745	Mus_caroli
ENSMOCG00000014291	Trub2	99	91.776	ENSMUSG00000039826	Trub2	100	88.235	Mus_musculus
ENSMOCG00000014291	Trub2	100	90.820	MGP_PahariEiJ_G0024826	Trub2	100	87.255	Mus_pahari
ENSMOCG00000014291	Trub2	100	91.237	MGP_SPRETEiJ_G0024286	Trub2	100	88.725	Mus_spretus
ENSMOCG00000014291	Trub2	99	82.392	ENSMPUG00000013206	TRUB2	82	82.392	Mustela_putorius_furo
ENSMOCG00000014291	Trub2	99	85.714	ENSMLUG00000005256	TRUB2	91	85.714	Myotis_lucifugus
ENSMOCG00000014291	Trub2	100	89.439	ENSNGAG00000018679	Trub2	99	84.158	Nannospalax_galili
ENSMOCG00000014291	Trub2	91	53.237	ENSNBRG00000016294	trub2	84	53.237	Neolamprologus_brichardi
ENSMOCG00000014291	Trub2	99	83.056	ENSNLEG00000017556	TRUB2	91	83.056	Nomascus_leucogenys
ENSMOCG00000014291	Trub2	98	75.676	ENSMEUG00000000484	TRUB2	95	75.676	Notamacropus_eugenii
ENSMOCG00000014291	Trub2	99	83.278	ENSOPRG00000001981	TRUB2	91	83.278	Ochotona_princeps
ENSMOCG00000014291	Trub2	99	84.950	ENSODEG00000017292	TRUB2	92	84.950	Octodon_degus
ENSMOCG00000014291	Trub2	91	53.597	ENSONIG00000004230	trub2	84	53.597	Oreochromis_niloticus
ENSMOCG00000014291	Trub2	73	76.056	ENSOANG00000029023	-	83	75.936	Ornithorhynchus_anatinus
ENSMOCG00000014291	Trub2	99	85.667	ENSOCUG00000026296	TRUB2	83	85.762	Oryctolagus_cuniculus
ENSMOCG00000014291	Trub2	92	53.214	ENSORLG00000020011	trub2	84	53.214	Oryzias_latipes
ENSMOCG00000014291	Trub2	92	53.405	ENSORLG00020011028	trub2	82	53.405	Oryzias_latipes_hni
ENSMOCG00000014291	Trub2	92	53.405	ENSORLG00015007494	trub2	86	53.405	Oryzias_latipes_hsok
ENSMOCG00000014291	Trub2	91	55.755	ENSOMEG00000006702	trub2	84	55.755	Oryzias_melastigma
ENSMOCG00000014291	Trub2	80	80.769	ENSOGAG00000003511	-	95	80.769	Otolemur_garnettii
ENSMOCG00000014291	Trub2	99	85.953	ENSOARG00000010579	-	90	85.953	Ovis_aries
ENSMOCG00000014291	Trub2	73	86.818	ENSOARG00000003785	-	87	86.818	Ovis_aries
ENSMOCG00000014291	Trub2	99	84.385	ENSPPAG00000043146	TRUB2	91	84.385	Pan_paniscus
ENSMOCG00000014291	Trub2	98	84.667	ENSPPRG00000006307	TRUB2	93	84.667	Panthera_pardus
ENSMOCG00000014291	Trub2	98	84.333	ENSPTIG00000012366	TRUB2	93	84.333	Panthera_tigris_altaica
ENSMOCG00000014291	Trub2	99	84.718	ENSPTRG00000021423	TRUB2	91	84.718	Pan_troglodytes
ENSMOCG00000014291	Trub2	99	84.718	ENSPTRG00000052151	-	91	84.718	Pan_troglodytes
ENSMOCG00000014291	Trub2	98	85.906	ENSPANG00000025856	TRUB2	90	85.906	Papio_anubis
ENSMOCG00000014291	Trub2	92	54.122	ENSPKIG00000019769	trub2	91	54.122	Paramormyrops_kingsleyae
ENSMOCG00000014291	Trub2	97	60.339	ENSPSIG00000015701	TRUB2	98	60.339	Pelodiscus_sinensis
ENSMOCG00000014291	Trub2	99	47.692	ENSPMGG00000010206	trub2	90	51.568	Periophthalmus_magnuspinnatus
ENSMOCG00000014291	Trub2	99	94.020	ENSPEMG00000017893	Trub2	100	89.756	Peromyscus_maniculatus_bairdii
ENSMOCG00000014291	Trub2	98	75.000	ENSPCIG00000026731	TRUB2	95	75.000	Phascolarctos_cinereus
ENSMOCG00000014291	Trub2	91	53.597	ENSPFOG00000018018	trub2	78	51.864	Poecilia_formosa
ENSMOCG00000014291	Trub2	92	53.405	ENSPLAG00000010484	trub2	85	51.689	Poecilia_latipinna
ENSMOCG00000014291	Trub2	96	51.890	ENSPMEG00000012913	trub2	86	51.890	Poecilia_mexicana
ENSMOCG00000014291	Trub2	91	53.597	ENSPREG00000002549	trub2	84	52.650	Poecilia_reticulata
ENSMOCG00000014291	Trub2	99	83.056	ENSPPYG00000019650	TRUB2	92	83.056	Pongo_abelii
ENSMOCG00000014291	Trub2	99	84.950	ENSPCAG00000015068	TRUB2	91	84.950	Procavia_capensis
ENSMOCG00000014291	Trub2	99	85.667	ENSPCOG00000017100	TRUB2	91	85.667	Propithecus_coquereli
ENSMOCG00000014291	Trub2	91	86.022	ENSPVAG00000001224	TRUB2	94	86.022	Pteropus_vampyrus
ENSMOCG00000014291	Trub2	91	53.957	ENSPNYG00000013666	trub2	84	53.957	Pundamilia_nyererei
ENSMOCG00000014291	Trub2	96	50.532	ENSPNAG00000017292	trub2	80	54.480	Pygocentrus_nattereri
ENSMOCG00000014291	Trub2	100	90.164	ENSRNOG00000043189	Trub2	94	90.164	Rattus_norvegicus
ENSMOCG00000014291	Trub2	98	77.852	ENSRBIG00000006965	TRUB2	89	77.852	Rhinopithecus_bieti
ENSMOCG00000014291	Trub2	98	85.906	ENSRROG00000042928	TRUB2	90	85.906	Rhinopithecus_roxellana
ENSMOCG00000014291	Trub2	99	84.385	ENSSBOG00000022439	TRUB2	91	84.385	Saimiri_boliviensis_boliviensis
ENSMOCG00000014291	Trub2	92	55.396	ENSSFOG00015013391	trub2	89	55.396	Scleropages_formosus
ENSMOCG00000014291	Trub2	91	56.115	ENSSMAG00000020820	trub2	84	56.115	Scophthalmus_maximus
ENSMOCG00000014291	Trub2	91	53.237	ENSSDUG00000016928	trub2	83	53.237	Seriola_dumerili
ENSMOCG00000014291	Trub2	91	53.597	ENSSLDG00000024701	trub2	83	53.597	Seriola_lalandi_dorsalis
ENSMOCG00000014291	Trub2	98	59.667	ENSSPUG00000015515	TRUB2	90	59.667	Sphenodon_punctatus
ENSMOCG00000014291	Trub2	91	55.872	ENSSPAG00000017865	trub2	84	55.872	Stegastes_partitus
ENSMOCG00000014291	Trub2	99	86.379	ENSSSCG00000005645	TRUB2	90	86.792	Sus_scrofa
ENSMOCG00000014291	Trub2	86	63.985	ENSTGUG00000003704	TRUB2	99	63.985	Taeniopygia_guttata
ENSMOCG00000014291	Trub2	92	51.071	ENSTRUG00000015499	trub2	86	51.071	Takifugu_rubripes
ENSMOCG00000014291	Trub2	92	54.093	ENSTNIG00000014721	trub2	96	54.093	Tetraodon_nigroviridis
ENSMOCG00000014291	Trub2	64	83.590	ENSTBEG00000000586	TRUB2	87	83.590	Tupaia_belangeri
ENSMOCG00000014291	Trub2	99	81.395	ENSTTRG00000016486	TRUB2	91	81.395	Tursiops_truncatus
ENSMOCG00000014291	Trub2	99	84.718	ENSUAMG00000020276	TRUB2	89	84.718	Ursus_americanus
ENSMOCG00000014291	Trub2	99	84.718	ENSUMAG00000022051	TRUB2	89	84.718	Ursus_maritimus
ENSMOCG00000014291	Trub2	99	64.784	ENSVPAG00000005793	TRUB2	95	64.784	Vicugna_pacos
ENSMOCG00000014291	Trub2	99	84.437	ENSVVUG00000013451	TRUB2	86	84.437	Vulpes_vulpes
ENSMOCG00000014291	Trub2	91	64.130	ENSXETG00000003973	trub2	85	64.130	Xenopus_tropicalis
ENSMOCG00000014291	Trub2	91	52.878	ENSXCOG00000008759	trub2	83	52.878	Xiphophorus_couchianus
ENSMOCG00000014291	Trub2	91	52.878	ENSXMAG00000015478	trub2	83	52.878	Xiphophorus_maculatus