EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000014488 (Gene tree)
Gene ID: 101993375
Gene Symbol: Patz1
Alias: 8430401L15Rik|MAZR|POZ-AT hook-zinc finger protein|Zfp278
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 18830 bases
Position: chrJH996436.1:10259067-10277896
Accession: 101993375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000015225	zf-C2H2	PF00096.26	2.1e-26	1	5
ENSMOCP00000015225	zf-C2H2	PF00096.26	2.1e-26	2	5
ENSMOCP00000015225	zf-C2H2	PF00096.26	2.1e-26	3	5
ENSMOCP00000015225	zf-C2H2	PF00096.26	2.1e-26	4	5
ENSMOCP00000015225	zf-C2H2	PF00096.26	2.1e-26	5	5
ENSMOCP00000015223	zf-C2H2	PF00096.26	2.6e-20	1	4
ENSMOCP00000015223	zf-C2H2	PF00096.26	2.6e-20	2	4
ENSMOCP00000015223	zf-C2H2	PF00096.26	2.6e-20	3	4
ENSMOCP00000015223	zf-C2H2	PF00096.26	2.6e-20	4	4
ENSMOCP00000015227	zf-C2H2	PF00096.26	1.4e-15	1	3
ENSMOCP00000015227	zf-C2H2	PF00096.26	1.4e-15	2	3
ENSMOCP00000015227	zf-C2H2	PF00096.26	1.4e-15	3	3
ENSMOCP00000015225	zf-met	PF12874.7	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000018994	-	2847	XM_005366095	ENSMOCP00000015227	537 (aa)	XP_005366152	UPI00038C3519
ENSMOCT00000018992	-	3859	XM_005366092	ENSMOCP00000015225	687 (aa)	XP_005366149	UPI00038BE268
ENSMOCT00000019001	-	210	-	ENSMOCP00000015234	70 (aa)	-	-
ENSMOCT00000018990	-	3725	XM_005366093	ENSMOCP00000015223	641 (aa)	XP_005366150	UPI00038BEEC9
ENSMOCT00000018999	-	309	-	ENSMOCP00000015232	102 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000014488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000014488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000014488	Patz1	52	37.647	ENSMOCG00000017127	-	77	41.441
ENSMOCG00000014488	Patz1	55	36.184	ENSMOCG00000021383	Zfp251	64	41.000
ENSMOCG00000014488	Patz1	51	30.736	ENSMOCG00000007851	-	71	31.515
ENSMOCG00000014488	Patz1	53	31.210	ENSMOCG00000002167	Zfp712	87	38.202
ENSMOCG00000014488	Patz1	80	40.449	ENSMOCG00000010611	Zbtb14	88	40.449
ENSMOCG00000014488	Patz1	69	46.429	ENSMOCG00000019797	Bcl6b	58	46.429
ENSMOCG00000014488	Patz1	51	36.585	ENSMOCG00000022870	Zfp236	60	36.283
ENSMOCG00000014488	Patz1	92	30.457	ENSMOCG00000017816	Gzf1	83	36.667
ENSMOCG00000014488	Patz1	58	36.283	ENSMOCG00000021124	Repin1	81	38.462
ENSMOCG00000014488	Patz1	51	37.584	ENSMOCG00000020296	Zfp628	60	39.024
ENSMOCG00000014488	Patz1	55	31.373	ENSMOCG00000007908	Zfp560	63	45.588
ENSMOCG00000014488	Patz1	59	31.429	ENSMOCG00000003692	Zfp354a	72	31.429
ENSMOCG00000014488	Patz1	54	35.507	ENSMOCG00000016267	Prdm5	83	40.426
ENSMOCG00000014488	Patz1	61	35.119	ENSMOCG00000000365	-	70	44.444
ENSMOCG00000014488	Patz1	80	40.000	ENSMOCG00000015724	Zfp26	98	41.489
ENSMOCG00000014488	Patz1	53	37.162	ENSMOCG00000004895	Zfp64	70	37.162
ENSMOCG00000014488	Patz1	54	35.065	ENSMOCG00000001762	-	66	35.065
ENSMOCG00000014488	Patz1	55	35.252	ENSMOCG00000003394	-	61	38.202
ENSMOCG00000014488	Patz1	89	35.542	ENSMOCG00000015696	Mynn	91	35.542
ENSMOCG00000014488	Patz1	71	32.576	ENSMOCG00000005017	Zbtb17	58	34.188
ENSMOCG00000014488	Patz1	53	39.091	ENSMOCG00000014774	Zfp961	70	39.815
ENSMOCG00000014488	Patz1	53	30.249	ENSMOCG00000000804	Zfp317	65	33.714
ENSMOCG00000014488	Patz1	58	31.429	ENSMOCG00000006946	Zfp53	66	40.909
ENSMOCG00000014488	Patz1	50	30.769	ENSMOCG00000005503	Zfp319	79	31.064
ENSMOCG00000014488	Patz1	69	39.815	ENSMOCG00000000286	Zbtb24	54	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000014488	Patz1	100	98.836	ENSG00000100105	PATZ1	100	98.836	Homo_sapiens
ENSMOCG00000014488	Patz1	99	60.229	ENSAPOG00000018447	patz1	100	59.177	Acanthochromis_polyacanthus
ENSMOCG00000014488	Patz1	100	98.544	ENSAMEG00000007074	PATZ1	100	98.544	Ailuropoda_melanoleuca
ENSMOCG00000014488	Patz1	100	58.807	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSMOCG00000014488	Patz1	100	57.703	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSMOCG00000014488	Patz1	100	62.745	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSMOCG00000014488	Patz1	85	91.096	ENSAPLG00000003934	PATZ1	99	90.925	Anas_platyrhynchos
ENSMOCG00000014488	Patz1	100	98.836	ENSANAG00000029603	PATZ1	100	98.836	Aotus_nancymaae
ENSMOCG00000014488	Patz1	97	62.222	ENSAMXG00000002273	patz1	98	60.682	Astyanax_mexicanus
ENSMOCG00000014488	Patz1	100	98.596	ENSBTAG00000005478	PATZ1	100	98.596	Bos_taurus
ENSMOCG00000014488	Patz1	100	98.836	ENSCJAG00000010978	PATZ1	100	98.836	Callithrix_jacchus
ENSMOCG00000014488	Patz1	100	98.752	ENSCAFG00000013087	PATZ1	100	98.690	Canis_familiaris
ENSMOCG00000014488	Patz1	100	98.128	ENSCHIG00000020203	PATZ1	100	98.128	Capra_hircus
ENSMOCG00000014488	Patz1	100	98.596	ENSTSYG00000033183	PATZ1	100	98.596	Carlito_syrichta
ENSMOCG00000014488	Patz1	100	98.836	ENSCCAG00000028772	PATZ1	100	98.836	Cebus_capucinus
ENSMOCG00000014488	Patz1	100	98.836	ENSCATG00000006101	PATZ1	100	98.836	Cercocebus_atys
ENSMOCG00000014488	Patz1	100	88.841	ENSCPBG00000011277	PATZ1	100	88.551	Chrysemys_picta_bellii
ENSMOCG00000014488	Patz1	100	98.836	ENSCANG00000024972	PATZ1	100	98.836	Colobus_angolensis_palliatus
ENSMOCG00000014488	Patz1	100	97.525	ENSCGRG00001004071	Patz1	100	97.525	Cricetulus_griseus_chok1gshd
ENSMOCG00000014488	Patz1	93	98.289	ENSCGRG00000004814	Patz1	100	98.377	Cricetulus_griseus_crigri
ENSMOCG00000014488	Patz1	100	55.168	ENSCSEG00000001385	patz1	100	55.385	Cynoglossus_semilaevis
ENSMOCG00000014488	Patz1	100	58.997	ENSCVAG00000007684	patz1	100	59.380	Cyprinodon_variegatus
ENSMOCG00000014488	Patz1	97	60.679	ENSDARG00000076584	patz1	98	58.663	Danio_rerio
ENSMOCG00000014488	Patz1	90	98.223	ENSDNOG00000003183	PATZ1	100	98.223	Dasypus_novemcinctus
ENSMOCG00000014488	Patz1	100	98.752	ENSDORG00000023834	Patz1	100	98.752	Dipodomys_ordii
ENSMOCG00000014488	Patz1	100	98.596	ENSECAG00000025030	PATZ1	100	98.596	Equus_caballus
ENSMOCG00000014488	Patz1	99	61.437	ENSELUG00000002333	patz1	100	58.120	Esox_lucius
ENSMOCG00000014488	Patz1	100	98.752	ENSFCAG00000030253	PATZ1	100	98.752	Felis_catus
ENSMOCG00000014488	Patz1	86	91.356	ENSFALG00000007450	PATZ1	99	91.312	Ficedula_albicollis
ENSMOCG00000014488	Patz1	96	96.881	ENSFDAG00000005614	PATZ1	100	96.881	Fukomys_damarensis
ENSMOCG00000014488	Patz1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSMOCG00000014488	Patz1	98	54.979	ENSGMOG00000001062	patz1	98	54.571	Gadus_morhua
ENSMOCG00000014488	Patz1	100	88.201	ENSGALG00000006934	PATZ1	100	88.345	Gallus_gallus
ENSMOCG00000014488	Patz1	100	59.029	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSMOCG00000014488	Patz1	85	91.767	ENSGAGG00000003214	PATZ1	100	91.595	Gopherus_agassizii
ENSMOCG00000014488	Patz1	100	98.981	ENSGGOG00000017171	PATZ1	100	98.981	Gorilla_gorilla
ENSMOCG00000014488	Patz1	97	62.648	ENSHCOG00000017644	patz1	98	61.191	Hippocampus_comes
ENSMOCG00000014488	Patz1	97	60.285	ENSIPUG00000017653	patz1	97	53.890	Ictalurus_punctatus
ENSMOCG00000014488	Patz1	100	98.690	ENSSTOG00000020707	PATZ1	100	98.690	Ictidomys_tridecemlineatus
ENSMOCG00000014488	Patz1	100	96.952	ENSJJAG00000015259	Patz1	100	96.952	Jaculus_jaculus
ENSMOCG00000014488	Patz1	100	57.632	ENSKMAG00000008157	patz1	100	57.730	Kryptolebias_marmoratus
ENSMOCG00000014488	Patz1	100	97.962	ENSLAFG00000002317	PATZ1	100	97.962	Loxodonta_africana
ENSMOCG00000014488	Patz1	100	98.690	ENSMFAG00000040968	PATZ1	100	98.690	Macaca_fascicularis
ENSMOCG00000014488	Patz1	100	98.690	ENSMNEG00000037588	PATZ1	100	98.690	Macaca_nemestrina
ENSMOCG00000014488	Patz1	100	98.836	ENSMLEG00000030938	PATZ1	100	98.836	Mandrillus_leucophaeus
ENSMOCG00000014488	Patz1	100	57.625	ENSMAMG00000023652	patz1	100	57.918	Mastacembelus_armatus
ENSMOCG00000014488	Patz1	85	87.521	ENSMGAG00000008439	PATZ1	100	87.350	Meleagris_gallopavo
ENSMOCG00000014488	Patz1	100	99.272	ENSMAUG00000004129	Patz1	100	99.272	Mesocricetus_auratus
ENSMOCG00000014488	Patz1	100	98.596	ENSMICG00000005430	PATZ1	100	98.596	Microcebus_murinus
ENSMOCG00000014488	Patz1	99	55.469	ENSMMOG00000021679	patz1	100	48.656	Mola_mola
ENSMOCG00000014488	Patz1	100	56.941	ENSMALG00000021172	patz1	100	56.941	Monopterus_albus
ENSMOCG00000014488	Patz1	100	98.836	MGP_CAROLIEiJ_G0016007	Patz1	100	98.836	Mus_caroli
ENSMOCG00000014488	Patz1	100	98.981	ENSMUSG00000020453	Patz1	100	98.981	Mus_musculus
ENSMOCG00000014488	Patz1	100	98.981	MGP_PahariEiJ_G0016884	Patz1	100	98.981	Mus_pahari
ENSMOCG00000014488	Patz1	100	98.981	MGP_SPRETEiJ_G0016846	Patz1	100	98.981	Mus_spretus
ENSMOCG00000014488	Patz1	100	98.440	ENSMLUG00000009942	PATZ1	100	98.440	Myotis_lucifugus
ENSMOCG00000014488	Patz1	100	99.272	ENSNGAG00000010268	Patz1	100	99.272	Nannospalax_galili
ENSMOCG00000014488	Patz1	100	58.368	ENSNBRG00000016032	patz1	100	58.368	Neolamprologus_brichardi
ENSMOCG00000014488	Patz1	68	93.763	ENSMEUG00000016293	PATZ1	100	93.763	Notamacropus_eugenii
ENSMOCG00000014488	Patz1	100	97.972	ENSODEG00000003589	PATZ1	100	97.972	Octodon_degus
ENSMOCG00000014488	Patz1	100	58.419	ENSONIG00000004248	patz1	100	58.565	Oreochromis_niloticus
ENSMOCG00000014488	Patz1	100	92.888	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSMOCG00000014488	Patz1	100	58.626	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSMOCG00000014488	Patz1	100	58.003	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSMOCG00000014488	Patz1	100	57.164	ENSOMEG00000006636	patz1	100	57.164	Oryzias_melastigma
ENSMOCG00000014488	Patz1	100	98.399	ENSOGAG00000027905	PATZ1	100	98.399	Otolemur_garnettii
ENSMOCG00000014488	Patz1	100	98.981	ENSPPAG00000033227	PATZ1	100	98.981	Pan_paniscus
ENSMOCG00000014488	Patz1	100	98.752	ENSPPRG00000001573	PATZ1	100	98.752	Panthera_pardus
ENSMOCG00000014488	Patz1	86	98.482	ENSPTIG00000007937	PATZ1	91	98.482	Panthera_tigris_altaica
ENSMOCG00000014488	Patz1	100	98.981	ENSPTRG00000014268	PATZ1	100	98.981	Pan_troglodytes
ENSMOCG00000014488	Patz1	100	98.836	ENSPANG00000006821	PATZ1	100	98.836	Papio_anubis
ENSMOCG00000014488	Patz1	100	62.127	ENSPKIG00000019584	patz1	100	61.381	Paramormyrops_kingsleyae
ENSMOCG00000014488	Patz1	60	83.293	ENSPSIG00000016553	-	91	83.051	Pelodiscus_sinensis
ENSMOCG00000014488	Patz1	58	95.455	ENSPSIG00000011562	-	100	96.000	Pelodiscus_sinensis
ENSMOCG00000014488	Patz1	100	57.022	ENSPMGG00000010196	patz1	100	57.303	Periophthalmus_magnuspinnatus
ENSMOCG00000014488	Patz1	100	99.376	ENSPEMG00000005321	Patz1	100	99.376	Peromyscus_maniculatus_bairdii
ENSMOCG00000014488	Patz1	100	57.625	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSMOCG00000014488	Patz1	100	57.709	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSMOCG00000014488	Patz1	100	57.182	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSMOCG00000014488	Patz1	100	98.690	ENSPPYG00000011732	PATZ1	100	98.690	Pongo_abelii
ENSMOCG00000014488	Patz1	100	98.440	ENSPCOG00000019729	PATZ1	100	98.440	Propithecus_coquereli
ENSMOCG00000014488	Patz1	100	98.544	ENSPVAG00000001749	PATZ1	100	98.544	Pteropus_vampyrus
ENSMOCG00000014488	Patz1	100	58.906	ENSPNYG00000013542	patz1	100	58.906	Pundamilia_nyererei
ENSMOCG00000014488	Patz1	84	60.292	ENSPNAG00000017222	patz1	99	59.325	Pygocentrus_nattereri
ENSMOCG00000014488	Patz1	100	98.836	ENSRBIG00000044231	PATZ1	100	98.836	Rhinopithecus_bieti
ENSMOCG00000014488	Patz1	100	98.836	ENSRROG00000037155	PATZ1	100	98.836	Rhinopithecus_roxellana
ENSMOCG00000014488	Patz1	100	98.836	ENSSBOG00000003894	PATZ1	100	98.836	Saimiri_boliviensis_boliviensis
ENSMOCG00000014488	Patz1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSMOCG00000014488	Patz1	100	86.771	ENSSPUG00000015298	PATZ1	100	86.486	Sphenodon_punctatus
ENSMOCG00000014488	Patz1	85	98.110	ENSSSCG00000010027	PATZ1	100	98.148	Sus_scrofa
ENSMOCG00000014488	Patz1	100	58.127	ENSTRUG00000015366	patz1	100	58.127	Takifugu_rubripes
ENSMOCG00000014488	Patz1	100	98.544	ENSTTRG00000010279	PATZ1	100	98.544	Tursiops_truncatus
ENSMOCG00000014488	Patz1	100	98.752	ENSUAMG00000015014	PATZ1	100	98.752	Ursus_americanus
ENSMOCG00000014488	Patz1	100	72.899	ENSXETG00000004190	patz1	100	72.174	Xenopus_tropicalis
ENSMOCG00000014488	Patz1	100	58.003	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus