EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000014950 (Gene tree)
Gene ID: 113455435
Gene Symbol: Scaf8
Alias: A630086M08Rik|A930036P18Rik|Rbm16
Full Name: SR-related CTD-associated factor 8
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 88740 bases
Position: chrLG9:14263560-14352299
Accession: 1925212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000015925	RRM_1	PF00076.22	1.6e-08	1	1
ENSMOCP00000015927	RRM_1	PF00076.22	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000019700	-	3801	-	ENSMOCP00000015927	1266 (aa)	-	-
ENSMOCT00000019698	-	3810	-	ENSMOCP00000015925	1269 (aa)	-	UPI00038C045F

Gene Model

Click here to download ENSMOCG00000014950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000014950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000014950	Scaf8	100	92.453	ENSG00000213079	SCAF8	100	92.453	Homo_sapiens
ENSMOCG00000014950	Scaf8	86	69.523	ENSAPOG00000015527	SCAF8	77	68.427	Acanthochromis_polyacanthus
ENSMOCG00000014950	Scaf8	99	92.155	ENSAMEG00000007583	SCAF8	97	90.712	Ailuropoda_melanoleuca
ENSMOCG00000014950	Scaf8	86	69.645	ENSAOCG00000002421	SCAF8	76	69.523	Amphiprion_ocellaris
ENSMOCG00000014950	Scaf8	84	70.079	ENSATEG00000006959	SCAF8	94	69.645	Anabas_testudineus
ENSMOCG00000014950	Scaf8	100	76.750	ENSAPLG00000005765	SCAF8	100	76.713	Anas_platyrhynchos
ENSMOCG00000014950	Scaf8	99	73.527	ENSACAG00000005282	SCAF8	99	73.606	Anolis_carolinensis
ENSMOCG00000014950	Scaf8	100	92.296	ENSANAG00000036184	SCAF8	100	92.296	Aotus_nancymaae
ENSMOCG00000014950	Scaf8	82	72.906	ENSACLG00000018828	SCAF8	78	72.644	Astatotilapia_calliptera
ENSMOCG00000014950	Scaf8	100	91.811	ENSBTAG00000031917	SCAF8	100	91.811	Bos_taurus
ENSMOCG00000014950	Scaf8	100	92.138	ENSCJAG00000012631	SCAF8	97	90.642	Callithrix_jacchus
ENSMOCG00000014950	Scaf8	99	92.405	ENSCAFG00000000570	SCAF8	99	92.405	Canis_familiaris
ENSMOCG00000014950	Scaf8	99	92.472	ENSCAFG00020015048	SCAF8	99	92.344	Canis_lupus_dingo
ENSMOCG00000014950	Scaf8	100	91.496	ENSCHIG00000025041	SCAF8	100	91.496	Capra_hircus
ENSMOCG00000014950	Scaf8	99	92.076	ENSTSYG00000010991	SCAF8	97	92.076	Carlito_syrichta
ENSMOCG00000014950	Scaf8	67	96.983	ENSCAPG00000003300	SCAF8	87	96.930	Cavia_aperea
ENSMOCG00000014950	Scaf8	99	84.652	ENSCPOG00000022216	-	99	83.861	Cavia_porcellus
ENSMOCG00000014950	Scaf8	100	92.296	ENSCCAG00000024952	SCAF8	100	92.296	Cebus_capucinus
ENSMOCG00000014950	Scaf8	100	92.767	ENSCATG00000035361	SCAF8	100	92.767	Cercocebus_atys
ENSMOCG00000014950	Scaf8	100	91.805	ENSCLAG00000004910	SCAF8	100	92.295	Chinchilla_lanigera
ENSMOCG00000014950	Scaf8	99	92.716	ENSCSAG00000013430	SCAF8	100	91.338	Chlorocebus_sabaeus
ENSMOCG00000014950	Scaf8	100	73.843	ENSCPBG00000016330	SCAF8	100	73.843	Chrysemys_picta_bellii
ENSMOCG00000014950	Scaf8	100	92.689	ENSCANG00000039499	SCAF8	99	92.631	Colobus_angolensis_palliatus
ENSMOCG00000014950	Scaf8	100	97.636	ENSCGRG00001020167	Scaf8	100	97.636	Cricetulus_griseus_chok1gshd
ENSMOCG00000014950	Scaf8	99	97.617	ENSCGRG00000004120	Scaf8	99	97.617	Cricetulus_griseus_crigri
ENSMOCG00000014950	Scaf8	82	70.079	ENSCSEG00000000043	-	76	71.654	Cynoglossus_semilaevis
ENSMOCG00000014950	Scaf8	83	65.645	ENSCVAG00000000925	SCAF8	74	69.553	Cyprinodon_variegatus
ENSMOCG00000014950	Scaf8	96	86.546	ENSDNOG00000025271	SCAF8	100	90.156	Dasypus_novemcinctus
ENSMOCG00000014950	Scaf8	99	91.693	ENSDORG00000006391	Scaf8	100	91.562	Dipodomys_ordii
ENSMOCG00000014950	Scaf8	100	92.453	ENSEASG00005018879	SCAF8	100	92.453	Equus_asinus_asinus
ENSMOCG00000014950	Scaf8	100	92.604	ENSECAG00000005540	SCAF8	100	92.604	Equus_caballus
ENSMOCG00000014950	Scaf8	80	70.855	ENSELUG00000002779	SCAF8	73	70.116	Esox_lucius
ENSMOCG00000014950	Scaf8	100	92.683	ENSFCAG00000023424	SCAF8	100	92.683	Felis_catus
ENSMOCG00000014950	Scaf8	100	75.463	ENSFALG00000012433	SCAF8	100	76.361	Ficedula_albicollis
ENSMOCG00000014950	Scaf8	100	91.267	ENSFDAG00000010335	SCAF8	99	91.753	Fukomys_damarensis
ENSMOCG00000014950	Scaf8	89	71.204	ENSFHEG00000008284	SCAF8	77	71.204	Fundulus_heteroclitus
ENSMOCG00000014950	Scaf8	80	57.129	ENSGMOG00000018812	SCAF8	83	58.721	Gadus_morhua
ENSMOCG00000014950	Scaf8	99	77.743	ENSGALG00000013635	SCAF8	99	76.809	Gallus_gallus
ENSMOCG00000014950	Scaf8	52	55.670	ENSGAFG00000018033	SCAF8	78	63.732	Gambusia_affinis
ENSMOCG00000014950	Scaf8	93	53.934	ENSGACG00000006909	SCAF8	100	55.164	Gasterosteus_aculeatus
ENSMOCG00000014950	Scaf8	63	70.443	ENSGAGG00000017820	-	88	70.443	Gopherus_agassizii
ENSMOCG00000014950	Scaf8	100	92.374	ENSGGOG00000008645	SCAF8	100	92.374	Gorilla_gorilla
ENSMOCG00000014950	Scaf8	82	72.775	ENSHBUG00000019537	SCAF8	78	72.513	Haplochromis_burtoni
ENSMOCG00000014950	Scaf8	100	92.054	ENSHGLG00000003619	SCAF8	100	92.054	Heterocephalus_glaber_female
ENSMOCG00000014950	Scaf8	100	91.424	ENSHGLG00100004708	SCAF8	100	91.990	Heterocephalus_glaber_male
ENSMOCG00000014950	Scaf8	99	93.038	ENSSTOG00000026043	SCAF8	99	93.038	Ictidomys_tridecemlineatus
ENSMOCG00000014950	Scaf8	100	91.969	ENSJJAG00000020480	Scaf8	100	91.969	Jaculus_jaculus
ENSMOCG00000014950	Scaf8	85	68.974	ENSKMAG00000012767	SCAF8	78	66.784	Kryptolebias_marmoratus
ENSMOCG00000014950	Scaf8	59	76.667	ENSLBEG00000012484	-	63	76.786	Labrus_bergylta
ENSMOCG00000014950	Scaf8	88	75.613	ENSLACG00000001394	SCAF8	99	63.162	Latimeria_chalumnae
ENSMOCG00000014950	Scaf8	100	61.376	ENSLOCG00000016856	SCAF8	100	60.594	Lepisosteus_oculatus
ENSMOCG00000014950	Scaf8	100	90.738	ENSLAFG00000000022	SCAF8	100	91.287	Loxodonta_africana
ENSMOCG00000014950	Scaf8	100	92.846	ENSMFAG00000032738	SCAF8	100	92.846	Macaca_fascicularis
ENSMOCG00000014950	Scaf8	100	92.846	ENSMMUG00000015163	SCAF8	100	92.846	Macaca_mulatta
ENSMOCG00000014950	Scaf8	100	92.846	ENSMNEG00000043466	SCAF8	100	92.846	Macaca_nemestrina
ENSMOCG00000014950	Scaf8	99	92.789	ENSMLEG00000034845	SCAF8	99	92.789	Mandrillus_leucophaeus
ENSMOCG00000014950	Scaf8	83	66.317	ENSMAMG00000009457	SCAF8	76	64.413	Mastacembelus_armatus
ENSMOCG00000014950	Scaf8	82	72.775	ENSMZEG00005005698	SCAF8	78	72.513	Maylandia_zebra
ENSMOCG00000014950	Scaf8	99	77.422	ENSMGAG00000012762	SCAF8	100	77.001	Meleagris_gallopavo
ENSMOCG00000014950	Scaf8	99	96.982	ENSMAUG00000009513	Scaf8	100	96.982	Mesocricetus_auratus
ENSMOCG00000014950	Scaf8	100	91.595	ENSMICG00000028965	SCAF8	100	91.438	Microcebus_murinus
ENSMOCG00000014950	Scaf8	84	64.943	ENSMMOG00000002216	SCAF8	78	64.187	Mola_mola
ENSMOCG00000014950	Scaf8	99	84.980	ENSMODG00000008301	SCAF8	99	84.980	Monodelphis_domestica
ENSMOCG00000014950	Scaf8	82	71.410	ENSMALG00000011584	SCAF8	78	71.708	Monopterus_albus
ENSMOCG00000014950	Scaf8	100	95.902	MGP_CAROLIEiJ_G0021016	Scaf8	100	95.902	Mus_caroli
ENSMOCG00000014950	Scaf8	100	96.217	ENSMUSG00000046201	Scaf8	100	96.217	Mus_musculus
ENSMOCG00000014950	Scaf8	100	96.690	MGP_PahariEiJ_G0023334	Scaf8	100	96.690	Mus_pahari
ENSMOCG00000014950	Scaf8	99	92.314	ENSMPUG00000001974	SCAF8	100	90.944	Mustela_putorius_furo
ENSMOCG00000014950	Scaf8	100	90.559	ENSMLUG00000029190	SCAF8	100	90.559	Myotis_lucifugus
ENSMOCG00000014950	Scaf8	100	93.775	ENSNGAG00000012332	Scaf8	100	93.775	Nannospalax_galili
ENSMOCG00000014950	Scaf8	100	53.205	ENSNBRG00000009067	SCAF8	100	52.905	Neolamprologus_brichardi
ENSMOCG00000014950	Scaf8	100	91.059	ENSNLEG00000015509	SCAF8	99	90.988	Nomascus_leucogenys
ENSMOCG00000014950	Scaf8	70	91.071	ENSOPRG00000018413	-	76	91.919	Ochotona_princeps
ENSMOCG00000014950	Scaf8	100	91.667	ENSODEG00000007296	SCAF8	100	91.667	Octodon_degus
ENSMOCG00000014950	Scaf8	100	55.383	ENSONIG00000008119	SCAF8	99	55.314	Oreochromis_niloticus
ENSMOCG00000014950	Scaf8	99	93.354	ENSOCUG00000026063	SCAF8	99	93.354	Oryctolagus_cuniculus
ENSMOCG00000014950	Scaf8	82	71.597	ENSORLG00000017358	SCAF8	75	71.859	Oryzias_latipes
ENSMOCG00000014950	Scaf8	82	71.728	ENSORLG00020002214	SCAF8	75	71.990	Oryzias_latipes_hni
ENSMOCG00000014950	Scaf8	82	71.859	ENSORLG00015015779	SCAF8	75	72.120	Oryzias_latipes_hsok
ENSMOCG00000014950	Scaf8	82	71.859	ENSOMEG00000015471	SCAF8	75	72.120	Oryzias_melastigma
ENSMOCG00000014950	Scaf8	99	91.607	ENSOGAG00000034223	SCAF8	97	90.255	Otolemur_garnettii
ENSMOCG00000014950	Scaf8	99	91.349	ENSOARG00000004159	SCAF8	100	91.277	Ovis_aries
ENSMOCG00000014950	Scaf8	100	92.374	ENSPPAG00000039826	SCAF8	100	92.374	Pan_paniscus
ENSMOCG00000014950	Scaf8	100	92.683	ENSPPRG00000023175	SCAF8	100	92.683	Panthera_pardus
ENSMOCG00000014950	Scaf8	99	92.557	ENSPTIG00000014836	SCAF8	100	92.557	Panthera_tigris_altaica
ENSMOCG00000014950	Scaf8	100	92.453	ENSPTRG00000018727	SCAF8	100	92.453	Pan_troglodytes
ENSMOCG00000014950	Scaf8	100	92.689	ENSPANG00000017489	SCAF8	100	90.852	Papio_anubis
ENSMOCG00000014950	Scaf8	91	75.916	ENSPKIG00000021212	SCAF8	100	56.863	Paramormyrops_kingsleyae
ENSMOCG00000014950	Scaf8	89	74.657	ENSPSIG00000008614	SCAF8	95	75.573	Pelodiscus_sinensis
ENSMOCG00000014950	Scaf8	99	97.935	ENSPEMG00000010531	Scaf8	100	97.935	Peromyscus_maniculatus_bairdii
ENSMOCG00000014950	Scaf8	100	85.310	ENSPCIG00000001141	SCAF8	100	85.310	Phascolarctos_cinereus
ENSMOCG00000014950	Scaf8	53	54.015	ENSPFOG00000004176	SCAF8	100	54.545	Poecilia_formosa
ENSMOCG00000014950	Scaf8	89	66.055	ENSPLAG00000021432	SCAF8	77	65.826	Poecilia_latipinna
ENSMOCG00000014950	Scaf8	54	54.015	ENSPMEG00000007591	SCAF8	84	65.311	Poecilia_mexicana
ENSMOCG00000014950	Scaf8	88	66.941	ENSPREG00000000652	SCAF8	77	66.706	Poecilia_reticulata
ENSMOCG00000014950	Scaf8	100	91.130	ENSPPYG00000017121	SCAF8	100	90.816	Pongo_abelii
ENSMOCG00000014950	Scaf8	85	96.650	ENSPCAG00000013044	SCAF8	90	96.650	Procavia_capensis
ENSMOCG00000014950	Scaf8	100	92.459	ENSPCOG00000002067	SCAF8	99	92.241	Propithecus_coquereli
ENSMOCG00000014950	Scaf8	98	89.120	ENSPVAG00000005582	SCAF8	99	90.240	Pteropus_vampyrus
ENSMOCG00000014950	Scaf8	82	72.906	ENSPNYG00000007277	SCAF8	78	72.644	Pundamilia_nyererei
ENSMOCG00000014950	Scaf8	82	71.466	ENSPNAG00000024740	SCAF8	79	71.990	Pygocentrus_nattereri
ENSMOCG00000014950	Scaf8	100	96.454	ENSRNOG00000016919	Scaf8	100	96.454	Rattus_norvegicus
ENSMOCG00000014950	Scaf8	100	92.767	ENSRBIG00000035769	SCAF8	100	92.767	Rhinopithecus_bieti
ENSMOCG00000014950	Scaf8	100	92.689	ENSRROG00000013580	SCAF8	100	92.689	Rhinopithecus_roxellana
ENSMOCG00000014950	Scaf8	100	92.296	ENSSBOG00000027023	SCAF8	100	92.296	Saimiri_boliviensis_boliviensis
ENSMOCG00000014950	Scaf8	100	84.851	ENSSHAG00000009915	SCAF8	100	84.851	Sarcophilus_harrisii
ENSMOCG00000014950	Scaf8	93	57.048	ENSSFOG00015009481	SCAF8	94	67.089	Scleropages_formosus
ENSMOCG00000014950	Scaf8	86	68.995	ENSSMAG00000008275	SCAF8	77	68.627	Scophthalmus_maximus
ENSMOCG00000014950	Scaf8	100	76.244	ENSSPUG00000015219	SCAF8	100	76.244	Sphenodon_punctatus
ENSMOCG00000014950	Scaf8	100	92.132	ENSSSCG00000004070	SCAF8	100	92.132	Sus_scrofa
ENSMOCG00000014950	Scaf8	99	77.987	ENSTGUG00000011151	SCAF8	100	78.083	Taeniopygia_guttata
ENSMOCG00000014950	Scaf8	82	70.327	ENSTRUG00000009243	SCAF8	76	70.327	Takifugu_rubripes
ENSMOCG00000014950	Scaf8	86	65.845	ENSTNIG00000016885	SCAF8	99	55.472	Tetraodon_nigroviridis
ENSMOCG00000014950	Scaf8	99	91.197	ENSTTRG00000014538	SCAF8	100	91.197	Tursiops_truncatus
ENSMOCG00000014950	Scaf8	100	92.054	ENSUAMG00000024736	SCAF8	99	91.990	Ursus_americanus
ENSMOCG00000014950	Scaf8	98	91.974	ENSUMAG00000013404	SCAF8	100	91.974	Ursus_maritimus
ENSMOCG00000014950	Scaf8	67	84.750	ENSVPAG00000012465	SCAF8	99	81.724	Vicugna_pacos
ENSMOCG00000014950	Scaf8	99	92.546	ENSVVUG00000007532	SCAF8	100	92.456	Vulpes_vulpes
ENSMOCG00000014950	Scaf8	100	61.025	ENSXETG00000013132	scaf8	99	61.328	Xenopus_tropicalis
ENSMOCG00000014950	Scaf8	88	66.941	ENSXMAG00000019192	SCAF8	78	66.824	Xiphophorus_maculatus