EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000015156 (Gene tree)
Gene ID: 101987138
Gene Symbol: Pcca
Alias: C79630
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 278515 bases
Position: chr17:34198750-34477264
Accession: 101987138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000016195	RimK	PF08443.11	1.4e-05	1	1
ENSMOCP00000016192	RimK	PF08443.11	1.5e-05	1	1
ENSMOCP00000016194	RimK	PF08443.11	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000019969	-	2465	XM_005355699	ENSMOCP00000016192	720 (aa)	XP_005355756	UPI00038C2F3A
ENSMOCT00000019972	-	2058	-	ENSMOCP00000016195	685 (aa)	-	-
ENSMOCT00000019971	-	2169	-	ENSMOCP00000016194	722 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000015156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000015156	Pcca	97	38.343	ENSMOCG00000003671	Mccc1	97	38.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015156	Pcca	100	88.599	ENSG00000175198	PCCA	99	93.038	Homo_sapiens
ENSMOCG00000015156	Pcca	93	73.292	ENSAPOG00000002389	pcca	100	76.087	Acanthochromis_polyacanthus
ENSMOCG00000015156	Pcca	87	89.873	ENSAMEG00000016627	PCCA	99	89.873	Ailuropoda_melanoleuca
ENSMOCG00000015156	Pcca	88	84.314	ENSACIG00000015913	PCCA	98	84.314	Amphilophus_citrinellus
ENSMOCG00000015156	Pcca	98	74.435	ENSAOCG00000005451	pcca	99	74.435	Amphiprion_ocellaris
ENSMOCG00000015156	Pcca	98	74.576	ENSAPEG00000002955	pcca	99	74.576	Amphiprion_percula
ENSMOCG00000015156	Pcca	97	74.286	ENSATEG00000004273	pcca	98	74.286	Anabas_testudineus
ENSMOCG00000015156	Pcca	99	81.304	ENSAPLG00000002609	PCCA	100	83.913	Anas_platyrhynchos
ENSMOCG00000015156	Pcca	100	83.813	ENSANAG00000031162	PCCA	94	91.442	Aotus_nancymaae
ENSMOCG00000015156	Pcca	99	74.059	ENSACLG00000006725	pcca	99	74.059	Astatotilapia_calliptera
ENSMOCG00000015156	Pcca	100	86.022	ENSBTAG00000010672	PCCA	100	86.640	Bos_taurus
ENSMOCG00000015156	Pcca	100	88.324	ENSCJAG00000020998	PCCA	100	88.324	Callithrix_jacchus
ENSMOCG00000015156	Pcca	100	88.919	ENSCAFG00000005838	PCCA	100	88.919	Canis_familiaris
ENSMOCG00000015156	Pcca	100	88.919	ENSCAFG00020022683	PCCA	100	88.919	Canis_lupus_dingo
ENSMOCG00000015156	Pcca	100	86.849	ENSCHIG00000007335	PCCA	100	87.397	Capra_hircus
ENSMOCG00000015156	Pcca	99	88.278	ENSTSYG00000000053	PCCA	95	91.754	Carlito_syrichta
ENSMOCG00000015156	Pcca	100	88.599	ENSCPOG00000011274	PCCA	100	88.599	Cavia_porcellus
ENSMOCG00000015156	Pcca	100	88.324	ENSCCAG00000022253	PCCA	100	88.324	Cebus_capucinus
ENSMOCG00000015156	Pcca	100	89.286	ENSCATG00000034177	PCCA	100	89.286	Cercocebus_atys
ENSMOCG00000015156	Pcca	100	90.385	ENSCLAG00000003205	PCCA	100	90.385	Chinchilla_lanigera
ENSMOCG00000015156	Pcca	100	89.286	ENSCSAG00000017493	PCCA	100	89.286	Chlorocebus_sabaeus
ENSMOCG00000015156	Pcca	87	84.766	ENSCHOG00000000247	PCCA	90	84.766	Choloepus_hoffmanni
ENSMOCG00000015156	Pcca	99	81.882	ENSCPBG00000018046	PCCA	99	82.010	Chrysemys_picta_bellii
ENSMOCG00000015156	Pcca	98	62.482	ENSCING00000008081	-	97	64.964	Ciona_intestinalis
ENSMOCG00000015156	Pcca	96	61.103	ENSCSAVG00000011361	-	99	63.338	Ciona_savignyi
ENSMOCG00000015156	Pcca	100	88.874	ENSCANG00000013062	PCCA	100	88.874	Colobus_angolensis_palliatus
ENSMOCG00000015156	Pcca	100	93.638	ENSCGRG00001015819	Pcca	100	93.638	Cricetulus_griseus_chok1gshd
ENSMOCG00000015156	Pcca	98	93.785	ENSCGRG00000014796	Pcca	100	92.798	Cricetulus_griseus_crigri
ENSMOCG00000015156	Pcca	99	72.174	ENSCSEG00000016645	pcca	98	74.143	Cynoglossus_semilaevis
ENSMOCG00000015156	Pcca	90	74.038	ENSCVAG00000010430	pcca	95	83.371	Cyprinodon_variegatus
ENSMOCG00000015156	Pcca	100	86.813	ENSDNOG00000042384	PCCA	100	89.752	Dasypus_novemcinctus
ENSMOCG00000015156	Pcca	99	79.148	ENSDORG00000012949	Pcca	100	77.273	Dipodomys_ordii
ENSMOCG00000015156	Pcca	98	89.326	ENSEASG00005022166	PCCA	100	88.493	Equus_asinus_asinus
ENSMOCG00000015156	Pcca	98	89.326	ENSECAG00000018952	PCCA	100	88.356	Equus_caballus
ENSMOCG00000015156	Pcca	95	73.333	ENSELUG00000002383	pcca	100	76.061	Esox_lucius
ENSMOCG00000015156	Pcca	100	89.178	ENSFCAG00000012573	PCCA	100	89.178	Felis_catus
ENSMOCG00000015156	Pcca	100	89.286	ENSFDAG00000005817	PCCA	97	89.286	Fukomys_damarensis
ENSMOCG00000015156	Pcca	97	75.429	ENSFHEG00000011811	pcca	98	75.429	Fundulus_heteroclitus
ENSMOCG00000015156	Pcca	97	75.143	ENSGAFG00000011218	pcca	98	75.143	Gambusia_affinis
ENSMOCG00000015156	Pcca	93	73.846	ENSGACG00000002342	pcca	100	76.615	Gasterosteus_aculeatus
ENSMOCG00000015156	Pcca	90	81.399	ENSGAGG00000010472	PCCA	95	84.261	Gopherus_agassizii
ENSMOCG00000015156	Pcca	100	89.011	ENSGGOG00000012516	PCCA	100	89.011	Gorilla_gorilla
ENSMOCG00000015156	Pcca	100	88.324	ENSHGLG00000011057	PCCA	100	88.324	Heterocephalus_glaber_female
ENSMOCG00000015156	Pcca	100	88.324	ENSHGLG00100001468	PCCA	100	88.324	Heterocephalus_glaber_male
ENSMOCG00000015156	Pcca	99	73.277	ENSHCOG00000016098	pcca	100	75.000	Hippocampus_comes
ENSMOCG00000015156	Pcca	99	87.717	ENSSTOG00000021045	PCCA	99	90.462	Ictidomys_tridecemlineatus
ENSMOCG00000015156	Pcca	100	89.350	ENSJJAG00000011150	Pcca	100	89.350	Jaculus_jaculus
ENSMOCG00000015156	Pcca	97	75.540	ENSKMAG00000014632	pcca	98	75.250	Kryptolebias_marmoratus
ENSMOCG00000015156	Pcca	93	80.124	ENSLACG00000012828	PCCA	100	82.764	Latimeria_chalumnae
ENSMOCG00000015156	Pcca	96	85.928	ENSLAFG00000014958	PCCA	100	88.772	Loxodonta_africana
ENSMOCG00000015156	Pcca	100	89.423	ENSMFAG00000020427	PCCA	100	89.423	Macaca_fascicularis
ENSMOCG00000015156	Pcca	100	89.148	ENSMMUG00000004493	PCCA	100	89.148	Macaca_mulatta
ENSMOCG00000015156	Pcca	100	89.148	ENSMNEG00000045261	PCCA	100	89.148	Macaca_nemestrina
ENSMOCG00000015156	Pcca	100	89.148	ENSMLEG00000033842	PCCA	100	89.148	Mandrillus_leucophaeus
ENSMOCG00000015156	Pcca	99	72.093	ENSMAMG00000009304	pcca	99	73.894	Mastacembelus_armatus
ENSMOCG00000015156	Pcca	99	74.059	ENSMZEG00005018487	pcca	99	74.059	Maylandia_zebra
ENSMOCG00000015156	Pcca	58	89.234	ENSMGAG00000014892	PCCA	99	89.234	Meleagris_gallopavo
ENSMOCG00000015156	Pcca	100	86.722	ENSMAUG00000000626	Pcca	100	86.722	Mesocricetus_auratus
ENSMOCG00000015156	Pcca	100	89.286	ENSMICG00000010685	-	100	89.286	Microcebus_murinus
ENSMOCG00000015156	Pcca	67	87.967	ENSMICG00000038258	-	96	86.301	Microcebus_murinus
ENSMOCG00000015156	Pcca	99	72.384	ENSMALG00000009947	pcca	100	74.394	Monopterus_albus
ENSMOCG00000015156	Pcca	100	91.575	MGP_CAROLIEiJ_G0019618	Pcca	100	91.575	Mus_caroli
ENSMOCG00000015156	Pcca	100	91.436	ENSMUSG00000041650	Pcca	100	91.436	Mus_musculus
ENSMOCG00000015156	Pcca	100	91.425	MGP_PahariEiJ_G0030634	Pcca	100	91.425	Mus_pahari
ENSMOCG00000015156	Pcca	100	91.298	MGP_SPRETEiJ_G0020515	Pcca	100	91.298	Mus_spretus
ENSMOCG00000015156	Pcca	98	87.737	ENSMPUG00000011333	PCCA	100	90.511	Mustela_putorius_furo
ENSMOCG00000015156	Pcca	80	88.336	ENSMLUG00000005729	PCCA	99	88.336	Myotis_lucifugus
ENSMOCG00000015156	Pcca	100	86.207	ENSNGAG00000016528	Pcca	100	86.483	Nannospalax_galili
ENSMOCG00000015156	Pcca	70	73.333	ENSNBRG00000019075	pcca	87	75.065	Neolamprologus_brichardi
ENSMOCG00000015156	Pcca	99	87.717	ENSODEG00000010667	PCCA	100	86.248	Octodon_degus
ENSMOCG00000015156	Pcca	99	74.477	ENSONIG00000013151	pcca	99	74.477	Oreochromis_niloticus
ENSMOCG00000015156	Pcca	90	89.127	ENSOCUG00000017230	PCCA	96	89.127	Oryctolagus_cuniculus
ENSMOCG00000015156	Pcca	99	72.931	ENSORLG00000000361	pcca	99	72.931	Oryzias_latipes
ENSMOCG00000015156	Pcca	99	73.212	ENSORLG00020005749	pcca	99	73.212	Oryzias_latipes_hni
ENSMOCG00000015156	Pcca	99	73.287	ENSORLG00015012738	pcca	99	73.287	Oryzias_latipes_hsok
ENSMOCG00000015156	Pcca	99	73.876	ENSOMEG00000001912	pcca	99	73.876	Oryzias_melastigma
ENSMOCG00000015156	Pcca	100	88.187	ENSOGAG00000017088	PCCA	100	88.187	Otolemur_garnettii
ENSMOCG00000015156	Pcca	93	87.307	ENSOARG00000004442	PCCA	100	90.248	Ovis_aries
ENSMOCG00000015156	Pcca	100	88.736	ENSPPAG00000036841	PCCA	100	88.736	Pan_paniscus
ENSMOCG00000015156	Pcca	100	89.178	ENSPPRG00000006626	PCCA	100	89.178	Panthera_pardus
ENSMOCG00000015156	Pcca	87	91.270	ENSPTIG00000009732	PCCA	100	91.270	Panthera_tigris_altaica
ENSMOCG00000015156	Pcca	100	88.736	ENSPTRG00000006001	PCCA	100	88.736	Pan_troglodytes
ENSMOCG00000015156	Pcca	97	77.603	ENSPKIG00000004765	pcca	99	77.603	Paramormyrops_kingsleyae
ENSMOCG00000015156	Pcca	93	80.124	ENSPSIG00000009154	PCCA	100	82.919	Pelodiscus_sinensis
ENSMOCG00000015156	Pcca	100	92.254	ENSPEMG00000009083	Pcca	100	92.254	Peromyscus_maniculatus_bairdii
ENSMOCG00000015156	Pcca	100	80.082	ENSPCIG00000027261	PCCA	100	80.082	Phascolarctos_cinereus
ENSMOCG00000015156	Pcca	97	75.000	ENSPFOG00000014855	pcca	98	75.000	Poecilia_formosa
ENSMOCG00000015156	Pcca	97	75.000	ENSPLAG00000016583	pcca	98	75.000	Poecilia_latipinna
ENSMOCG00000015156	Pcca	97	74.857	ENSPMEG00000011613	pcca	98	74.857	Poecilia_mexicana
ENSMOCG00000015156	Pcca	94	73.668	ENSPREG00000007537	pcca	100	76.256	Poecilia_reticulata
ENSMOCG00000015156	Pcca	100	88.736	ENSPPYG00000005473	PCCA	100	88.736	Pongo_abelii
ENSMOCG00000015156	Pcca	100	87.225	ENSPCOG00000015321	PCCA	100	87.225	Propithecus_coquereli
ENSMOCG00000015156	Pcca	95	73.414	ENSPNYG00000008226	pcca	100	76.133	Pundamilia_nyererei
ENSMOCG00000015156	Pcca	99	74.964	ENSPNAG00000011078	pcca	99	76.177	Pygocentrus_nattereri
ENSMOCG00000015156	Pcca	100	89.148	ENSRROG00000030936	PCCA	100	89.148	Rhinopithecus_roxellana
ENSMOCG00000015156	Pcca	100	88.599	ENSSBOG00000020005	PCCA	100	88.599	Saimiri_boliviensis_boliviensis
ENSMOCG00000015156	Pcca	99	77.471	ENSSFOG00015021986	pcca	99	79.030	Scleropages_formosus
ENSMOCG00000015156	Pcca	93	74.068	ENSSMAG00000018126	pcca	100	76.863	Scophthalmus_maximus
ENSMOCG00000015156	Pcca	97	75.429	ENSSDUG00000021326	pcca	98	75.429	Seriola_dumerili
ENSMOCG00000015156	Pcca	97	75.429	ENSSLDG00000016568	pcca	98	75.429	Seriola_lalandi_dorsalis
ENSMOCG00000015156	Pcca	90	79.618	ENSSPUG00000006036	PCCA	96	82.166	Sphenodon_punctatus
ENSMOCG00000015156	Pcca	96	71.676	ENSSPAG00000022191	pcca	95	71.676	Stegastes_partitus
ENSMOCG00000015156	Pcca	100	87.808	ENSSSCG00000009522	PCCA	100	87.808	Sus_scrofa
ENSMOCG00000015156	Pcca	99	78.986	ENSTGUG00000010915	PCCA	100	81.594	Taeniopygia_guttata
ENSMOCG00000015156	Pcca	97	75.036	ENSTRUG00000004990	pcca	99	75.036	Takifugu_rubripes
ENSMOCG00000015156	Pcca	100	86.066	ENSTTRG00000002569	PCCA	100	86.066	Tursiops_truncatus
ENSMOCG00000015156	Pcca	98	84.746	ENSUMAG00000023453	PCCA	100	90.248	Ursus_maritimus
ENSMOCG00000015156	Pcca	100	88.782	ENSVVUG00000013550	PCCA	100	90.671	Vulpes_vulpes
ENSMOCG00000015156	Pcca	94	74.125	ENSXCOG00000014159	pcca	100	76.712	Xiphophorus_couchianus
ENSMOCG00000015156	Pcca	97	75.143	ENSXMAG00000014869	pcca	98	75.143	Xiphophorus_maculatus