EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000015373 (Gene tree)
Gene ID
101994091
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Minus strand
Length
22437 bases
Position
chr7:81560854-81583290
Accession
101994091
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000016494Fox-1_CPF12414.82.2e-4111
ENSMOCP00000016498Fox-1_CPF12414.82.3e-4111
ENSMOCP00000016492Fox-1_CPF12414.82.5e-4111
ENSMOCP00000016492RRM_1PF00076.221e-1811
ENSMOCP00000016498RRM_1PF00076.221.1e-1811
ENSMOCP00000016494RRM_1PF00076.220.0001911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000020277-1292XM_005350820ENSMOCP00000016498374 (aa)XP_005350877-
ENSMOCT00000020271-2165XM_005350822ENSMOCP00000016492360 (aa)XP_005350879-
ENSMOCT00000020273-990-ENSMOCP00000016494329 (aa)--
Gene Model
Click here to download ENSMOCG00000015373's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015373's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000015373Rbfox39653.218ENSMOCG00000009327Rbfox29154.315
ENSMOCG00000015373Rbfox310061.183ENSMOCG00000020932Rbfox19557.246
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000015373Rbfox310096.049ENSG00000167281RBFOX310096.508Homo_sapiens
ENSMOCG00000015373Rbfox38087.500ENSAPOG00000015658-8958.380Acanthochromis_polyacanthus
ENSMOCG00000015373Rbfox310071.543ENSAPOG00000021630rbfox3b8268.144Acanthochromis_polyacanthus
ENSMOCG00000015373Rbfox39876.152ENSAMEG00000014170RBFOX39371.290Ailuropoda_melanoleuca
ENSMOCG00000015373Rbfox38380.632ENSACIG00000010817rbfox3b8586.207Amphilophus_citrinellus
ENSMOCG00000015373Rbfox39661.538ENSACIG00000003768-7273.664Amphilophus_citrinellus
ENSMOCG00000015373Rbfox310070.718ENSAOCG00000012358rbfox3b8167.147Amphiprion_ocellaris
ENSMOCG00000015373Rbfox37987.500ENSAOCG00000010786-8063.352Amphiprion_ocellaris
ENSMOCG00000015373Rbfox37987.500ENSAPEG00000015891-7960.541Amphiprion_percula
ENSMOCG00000015373Rbfox38078.629ENSAPEG00000019081rbfox3b7386.207Amphiprion_percula
ENSMOCG00000015373Rbfox310071.350ENSATEG00000019945rbfox3b9668.091Anabas_testudineus
ENSMOCG00000015373Rbfox39667.335ENSATEG00000023101-9366.477Anabas_testudineus
ENSMOCG00000015373Rbfox310077.072ENSACAG00000016093RBFOX38375.216Anolis_carolinensis
ENSMOCG00000015373Rbfox39794.688ENSANAG00000023457RBFOX38992.500Aotus_nancymaae
ENSMOCG00000015373Rbfox310070.745ENSACLG00000020011rbfox3b9566.859Astatotilapia_calliptera
ENSMOCG00000015373Rbfox310070.799ENSACLG00000025552-8170.402Astatotilapia_calliptera
ENSMOCG00000015373Rbfox39672.000ENSAMXG00000037246rbfox3a9071.429Astyanax_mexicanus
ENSMOCG00000015373Rbfox310065.840ENSAMXG00000042841rbfox3b8562.644Astyanax_mexicanus
ENSMOCG00000015373Rbfox39791.562ENSBTAG00000006280RBFOX39791.562Bos_taurus
ENSMOCG00000015373Rbfox39794.688ENSCJAG00000009563RBFOX39792.500Callithrix_jacchus
ENSMOCG00000015373Rbfox37978.671ENSCAFG00000005547RBFOX310072.171Canis_familiaris
ENSMOCG00000015373Rbfox310096.257ENSCAFG00020008126RBFOX310096.257Canis_lupus_dingo
ENSMOCG00000015373Rbfox39892.329ENSCHIG00000009124RBFOX39892.329Capra_hircus
ENSMOCG00000015373Rbfox310096.960ENSTSYG00000029617RBFOX310096.960Carlito_syrichta
ENSMOCG00000015373Rbfox39895.368ENSCPOG00000021703RBFOX39894.278Cavia_porcellus
ENSMOCG00000015373Rbfox39794.688ENSCCAG00000028450RBFOX39792.500Cebus_capucinus
ENSMOCG00000015373Rbfox39790.000ENSCATG00000018349RBFOX38989.375Cercocebus_atys
ENSMOCG00000015373Rbfox310096.524ENSCLAG00000006449RBFOX310096.524Chinchilla_lanigera
ENSMOCG00000015373Rbfox39881.197ENSCSAG00000002355RBFOX39781.197Chlorocebus_sabaeus
ENSMOCG00000015373Rbfox39676.602ENSCPBG00000010904RBFOX39575.072Chrysemys_picta_bellii
ENSMOCG00000015373Rbfox310096.791ENSCANG00000043120RBFOX310096.791Colobus_angolensis_palliatus
ENSMOCG00000015373Rbfox310098.400ENSCGRG00001019476Rbfox310098.400Cricetulus_griseus_chok1gshd
ENSMOCG00000015373Rbfox310098.400ENSCGRG00000003268Rbfox310098.400Cricetulus_griseus_crigri
ENSMOCG00000015373Rbfox310056.438ENSCSEG00000020606RBFOX38754.598Cynoglossus_semilaevis
ENSMOCG00000015373Rbfox38487.500ENSCSEG00000015567RBFOX38962.963Cynoglossus_semilaevis
ENSMOCG00000015373Rbfox310070.718ENSCVAG00000006882rbfox3b8167.147Cyprinodon_variegatus
ENSMOCG00000015373Rbfox310063.636ENSDARG00000074310rbfox3b8582.759Danio_rerio
ENSMOCG00000015373Rbfox39671.143ENSDARG00000010083rbfox3a9469.944Danio_rerio
ENSMOCG00000015373Rbfox38585.294ENSDNOG00000039391RBFOX38580.374Dasypus_novemcinctus
ENSMOCG00000015373Rbfox39684.958ENSDORG00000005352Rbfox39682.730Dipodomys_ordii
ENSMOCG00000015373Rbfox310061.954ENSEBUG00000002129RBFOX39261.765Eptatretus_burgeri
ENSMOCG00000015373Rbfox38751.553ENSEBUG00000013559RBFOX37151.155Eptatretus_burgeri
ENSMOCG00000015373Rbfox39680.636ENSEASG00005005059RBFOX39582.659Equus_asinus_asinus
ENSMOCG00000015373Rbfox39680.347ENSECAG00000023811RBFOX39582.370Equus_caballus
ENSMOCG00000015373Rbfox39881.644ENSEEUG00000013974RBFOX39881.644Erinaceus_europaeus
ENSMOCG00000015373Rbfox310070.745ENSELUG00000017963rbfox3b9563.291Esox_lucius
ENSMOCG00000015373Rbfox35362.304ENSELUG00000009807-5067.059Esox_lucius
ENSMOCG00000015373Rbfox39792.812ENSFCAG00000002555RBFOX39790.625Felis_catus
ENSMOCG00000015373Rbfox39668.258ENSFALG00000012288RBFOX39260.287Ficedula_albicollis
ENSMOCG00000015373Rbfox39890.736ENSFDAG00000007489RBFOX39789.646Fukomys_damarensis
ENSMOCG00000015373Rbfox310068.278ENSFHEG00000008550rbfox3b9564.241Fundulus_heteroclitus
ENSMOCG00000015373Rbfox310063.228ENSGMOG00000019304-9169.079Gadus_morhua
ENSMOCG00000015373Rbfox39676.812ENSGALG00000032889RBFOX38376.812Gallus_gallus
ENSMOCG00000015373Rbfox39867.887ENSGAFG00000005025rbfox3b7486.207Gambusia_affinis
ENSMOCG00000015373Rbfox39673.352ENSGACG00000002138-9673.352Gasterosteus_aculeatus
ENSMOCG00000015373Rbfox39676.602ENSGAGG00000020025RBFOX39575.072Gopherus_agassizii
ENSMOCG00000015373Rbfox310096.524ENSGGOG00000012546RBFOX310096.524Gorilla_gorilla
ENSMOCG00000015373Rbfox310070.745ENSHBUG00000018099rbfox3b8267.867Haplochromis_burtoni
ENSMOCG00000015373Rbfox310071.088ENSHBUG00000023098-9070.718Haplochromis_burtoni
ENSMOCG00000015373Rbfox310095.238ENSHGLG00000008679RBFOX310095.238Heterocephalus_glaber_female
ENSMOCG00000015373Rbfox39891.328ENSHGLG00100014739RBFOX39889.702Heterocephalus_glaber_male
ENSMOCG00000015373Rbfox37886.364ENSHCOG00000001863RBFOX38082.759Hippocampus_comes
ENSMOCG00000015373Rbfox39664.553ENSHCOG00000007444RBFOX37863.429Hippocampus_comes
ENSMOCG00000015373Rbfox310062.500ENSIPUG00000021966rbfox3b8473.894Ictalurus_punctatus
ENSMOCG00000015373Rbfox39671.703ENSIPUG00000012010rbfox3a9070.286Ictalurus_punctatus
ENSMOCG00000015373Rbfox39794.737ENSSTOG00000026817RBFOX310095.495Ictidomys_tridecemlineatus
ENSMOCG00000015373Rbfox310096.524ENSJJAG00000014167Rbfox310096.524Jaculus_jaculus
ENSMOCG00000015373Rbfox310070.718ENSKMAG00000006726rbfox3b7978.319Kryptolebias_marmoratus
ENSMOCG00000015373Rbfox39671.264ENSLBEG00000022508-8170.690Labrus_bergylta
ENSMOCG00000015373Rbfox310071.277ENSLBEG00000004030rbfox3b8586.207Labrus_bergylta
ENSMOCG00000015373Rbfox39667.204ENSLACG00000018409-9363.592Latimeria_chalumnae
ENSMOCG00000015373Rbfox39674.425ENSLOCG00000012267rbfox3a9073.851Lepisosteus_oculatus
ENSMOCG00000015373Rbfox39894.587ENSLAFG00000016623RBFOX39894.521Loxodonta_africana
ENSMOCG00000015373Rbfox39695.652ENSMFAG00000002247RBFOX39693.623Macaca_fascicularis
ENSMOCG00000015373Rbfox310096.049ENSMMUG00000023028RBFOX310096.049Macaca_mulatta
ENSMOCG00000015373Rbfox39891.233ENSMNEG00000041147RBFOX39790.959Macaca_nemestrina
ENSMOCG00000015373Rbfox39790.000ENSMLEG00000025686RBFOX39780.912Mandrillus_leucophaeus
ENSMOCG00000015373Rbfox39665.903ENSMAMG00000020600-9263.978Mastacembelus_armatus
ENSMOCG00000015373Rbfox38380.080ENSMAMG00000019810rbfox3b8684.375Mastacembelus_armatus
ENSMOCG00000015373Rbfox36665.926ENSMZEG00005003055-5988.148Maylandia_zebra
ENSMOCG00000015373Rbfox310070.745ENSMZEG00005000781rbfox3b8267.867Maylandia_zebra
ENSMOCG00000015373Rbfox35389.583ENSMGAG00000005600RBFOX37389.583Meleagris_gallopavo
ENSMOCG00000015373Rbfox310097.600ENSMAUG00000013543Rbfox310097.600Mesocricetus_auratus
ENSMOCG00000015373Rbfox310095.187ENSMICG00000014898RBFOX310095.187Microcebus_murinus
ENSMOCG00000015373Rbfox310069.231ENSMMOG00000020193rbfox3b9161.082Mola_mola
ENSMOCG00000015373Rbfox39676.812ENSMODG00000002089RBFOX38376.812Monodelphis_domestica
ENSMOCG00000015373Rbfox310070.166ENSMALG00000020407rbfox3b8166.571Monopterus_albus
ENSMOCG00000015373Rbfox38489.583ENSMALG00000018270-8589.655Monopterus_albus
ENSMOCG00000015373Rbfox310098.396MGP_CAROLIEiJ_G0017487Rbfox310099.310Mus_caroli
ENSMOCG00000015373Rbfox310098.128ENSMUSG00000025576Rbfox310099.310Mus_musculus
ENSMOCG00000015373Rbfox310098.667MGP_PahariEiJ_G0018614Rbfox3100100.000Mus_pahari
ENSMOCG00000015373Rbfox310098.663MGP_SPRETEiJ_G0018331Rbfox310099.310Mus_spretus
ENSMOCG00000015373Rbfox39875.622ENSMPUG00000012319RBFOX39273.881Mustela_putorius_furo
ENSMOCG00000015373Rbfox310097.594ENSNGAG00000018006Rbfox310097.594Nannospalax_galili
ENSMOCG00000015373Rbfox37886.667ENSNBRG00000022885-7786.207Neolamprologus_brichardi
ENSMOCG00000015373Rbfox310068.785ENSNBRG00000010102rbfox3b7485.185Neolamprologus_brichardi
ENSMOCG00000015373Rbfox36192.593ENSNLEG00000000153-7992.593Nomascus_leucogenys
ENSMOCG00000015373Rbfox39664.638ENSMEUG00000004218-9662.609Notamacropus_eugenii
ENSMOCG00000015373Rbfox36896.629ENSOPRG00000016279-7596.629Ochotona_princeps
ENSMOCG00000015373Rbfox310096.524ENSODEG00000009433RBFOX310096.524Octodon_degus
ENSMOCG00000015373Rbfox310075.989ENSONIG00000009549rbfox3b9673.352Oreochromis_niloticus
ENSMOCG00000015373Rbfox310071.350ENSONIG00000007282-8770.977Oreochromis_niloticus
ENSMOCG00000015373Rbfox37979.720ENSOCUG00000014217RBFOX37878.671Oryctolagus_cuniculus
ENSMOCG00000015373Rbfox310071.277ENSORLG00000000905rbfox3b6765.079Oryzias_latipes
ENSMOCG00000015373Rbfox310071.277ENSORLG00020018030rbfox3b8963.924Oryzias_latipes_hni
ENSMOCG00000015373Rbfox310070.166ENSORLG00015009200rbfox3b8586.207Oryzias_latipes_hsok
ENSMOCG00000015373Rbfox36674.806ENSOMEG00000014677rbfox3b7675.943Oryzias_melastigma
ENSMOCG00000015373Rbfox39680.580ENSOGAG00000029595RBFOX39075.781Otolemur_garnettii
ENSMOCG00000015373Rbfox36880.702ENSOARG00000002908RBFOX39254.271Ovis_aries
ENSMOCG00000015373Rbfox39296.370ENSPPAG00000025383RBFOX39496.370Pan_paniscus
ENSMOCG00000015373Rbfox39792.812ENSPPRG00000007819RBFOX39790.625Panthera_pardus
ENSMOCG00000015373Rbfox310096.524ENSPTRG00000009727RBFOX310096.524Pan_troglodytes
ENSMOCG00000015373Rbfox39790.000ENSPANG00000019837RBFOX39780.912Papio_anubis
ENSMOCG00000015373Rbfox39673.757ENSPKIG00000010299rbfox3a8565.963Paramormyrops_kingsleyae
ENSMOCG00000015373Rbfox310058.995ENSPKIG00000022633-8556.198Paramormyrops_kingsleyae
ENSMOCG00000015373Rbfox38767.619ENSPMGG00000008000rbfox3b7766.333Periophthalmus_magnuspinnatus
ENSMOCG00000015373Rbfox310099.198ENSPEMG00000010500Rbfox310099.198Peromyscus_maniculatus_bairdii
ENSMOCG00000015373Rbfox36360.956ENSPMAG00000008689rbfox3b9960.956Petromyzon_marinus
ENSMOCG00000015373Rbfox39691.884ENSPCIG00000005766RBFOX39689.855Phascolarctos_cinereus
ENSMOCG00000015373Rbfox310071.543ENSPFOG00000018294rbfox3b9267.188Poecilia_formosa
ENSMOCG00000015373Rbfox36584.699ENSPLAG00000000481rbfox3b7188.372Poecilia_latipinna
ENSMOCG00000015373Rbfox310068.278ENSPMEG00000022997rbfox3b9564.241Poecilia_mexicana
ENSMOCG00000015373Rbfox310070.799ENSPREG00000012886rbfox3b8667.241Poecilia_reticulata
ENSMOCG00000015373Rbfox39871.507ENSPPYG00000008704RBFOX39371.507Pongo_abelii
ENSMOCG00000015373Rbfox39691.884ENSPCAG00000001401RBFOX39691.884Procavia_capensis
ENSMOCG00000015373Rbfox310095.556ENSPCOG00000012689RBFOX310095.278Propithecus_coquereli
ENSMOCG00000015373Rbfox39684.104ENSPVAG00000015243RBFOX39684.104Pteropus_vampyrus
ENSMOCG00000015373Rbfox37485.185ENSPNYG00000010414rbfox3b7485.185Pundamilia_nyererei
ENSMOCG00000015373Rbfox37886.667ENSPNYG00000009079-7386.207Pundamilia_nyererei
ENSMOCG00000015373Rbfox39672.527ENSPNAG00000002889rbfox3a9364.062Pygocentrus_nattereri
ENSMOCG00000015373Rbfox38381.250ENSPNAG00000018173rbfox3b7682.759Pygocentrus_nattereri
ENSMOCG00000015373Rbfox310098.667ENSRNOG00000003386Rbfox310098.667Rattus_norvegicus
ENSMOCG00000015373Rbfox39790.312ENSRBIG00000040449RBFOX38589.688Rhinopithecus_bieti
ENSMOCG00000015373Rbfox39790.312ENSRROG00000000766RBFOX39781.197Rhinopithecus_roxellana
ENSMOCG00000015373Rbfox39895.342ENSSBOG00000031591RBFOX39893.425Saimiri_boliviensis_boliviensis
ENSMOCG00000015373Rbfox39576.752ENSSHAG00000016076RBFOX39574.522Sarcophilus_harrisii
ENSMOCG00000015373Rbfox39660.172ENSSFOG00015004716RBFOX38955.836Scleropages_formosus
ENSMOCG00000015373Rbfox39674.586ENSSFOG00015023260rbfox3a8970.978Scleropages_formosus
ENSMOCG00000015373Rbfox310067.939ENSSMAG00000012618rbfox3b7164.286Scophthalmus_maximus
ENSMOCG00000015373Rbfox310068.956ENSSMAG00000019052-9567.622Scophthalmus_maximus
ENSMOCG00000015373Rbfox39664.387ENSSDUG00000015801-8078.947Seriola_dumerili
ENSMOCG00000015373Rbfox310068.278ENSSDUG00000023183rbfox3b9564.241Seriola_dumerili
ENSMOCG00000015373Rbfox37987.500ENSSLDG00000016098-9066.038Seriola_lalandi_dorsalis
ENSMOCG00000015373Rbfox310070.718ENSSLDG00000000149rbfox3b8167.147Seriola_lalandi_dorsalis
ENSMOCG00000015373Rbfox39676.657ENSSPUG00000011733RBFOX39575.793Sphenodon_punctatus
ENSMOCG00000015373Rbfox38379.167ENSSPAG00000017571rbfox3b7186.207Stegastes_partitus
ENSMOCG00000015373Rbfox38863.551ENSSPAG00000004898-7561.589Stegastes_partitus
ENSMOCG00000015373Rbfox38894.545ENSSSCG00000039498RBFOX310094.545Sus_scrofa
ENSMOCG00000015373Rbfox310067.639ENSTRUG00000004894rbfox3b9065.583Takifugu_rubripes
ENSMOCG00000015373Rbfox310063.544ENSTNIG00000011278rbfox3b9258.095Tetraodon_nigroviridis
ENSMOCG00000015373Rbfox39662.674ENSTBEG00000004296-9660.724Tupaia_belangeri
ENSMOCG00000015373Rbfox39686.667ENSTTRG00000003676RBFOX39686.667Tursiops_truncatus
ENSMOCG00000015373Rbfox39880.057ENSUAMG00000004668RBFOX39779.487Ursus_americanus
ENSMOCG00000015373Rbfox310096.111ENSVVUG00000017864RBFOX38996.111Vulpes_vulpes
ENSMOCG00000015373Rbfox310063.158ENSXETG00000020236rbfox39158.355Xenopus_tropicalis
ENSMOCG00000015373Rbfox310069.421ENSXCOG00000018262rbfox3b8584.000Xiphophorus_couchianus
ENSMOCG00000015373Rbfox310071.543ENSXMAG00000012939rbfox3b9557.407Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us