EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000015463 (Gene tree)
Gene ID: 101994001
Gene Symbol: Pum1
Alias: Pumm
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 117309 bases
Position: chr10:54021502-54138810
Accession: 101994001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	1	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	2	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	3	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	4	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	5	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	6	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	7	8
ENSMOCP00000016617	PUF	PF00806.19	1.7e-70	8	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	1	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	2	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	3	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	4	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	5	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	6	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	7	8
ENSMOCP00000016615	PUF	PF00806.19	1.5e-69	8	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	1	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	2	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	3	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	4	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	5	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	6	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	7	8
ENSMOCP00000016614	PUF	PF00806.19	3.1e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000020399	-	2832	-	ENSMOCP00000016617	943 (aa)	-	UPI00038BC310
ENSMOCT00000020397	-	5034	XM_005353154	ENSMOCP00000016615	1091 (aa)	XP_005353211	UPI00038BD98D
ENSMOCT00000020396	-	5325	XM_005353149	ENSMOCP00000016614	1188 (aa)	XP_005353206	UPI00038C1C82

Gene Model

Click here to download ENSMOCG00000015463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000015463	Pum1	89	76.115	ENSMOCG00000013663	Pum2	100	76.301

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015463	Pum1	100	98.991	ENSG00000134644	PUM1	100	98.991	Homo_sapiens
ENSMOCG00000015463	Pum1	100	83.066	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSMOCG00000015463	Pum1	100	98.739	ENSAMEG00000017656	PUM1	97	98.739	Ailuropoda_melanoleuca
ENSMOCG00000015463	Pum1	100	83.066	ENSACIG00000021013	pum1	100	75.828	Amphilophus_citrinellus
ENSMOCG00000015463	Pum1	100	83.066	ENSAOCG00000003944	pum1	100	77.413	Amphiprion_ocellaris
ENSMOCG00000015463	Pum1	100	83.066	ENSAPEG00000014550	pum1	100	77.413	Amphiprion_percula
ENSMOCG00000015463	Pum1	100	83.066	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSMOCG00000015463	Pum1	100	97.139	ENSAPLG00000009351	PUM1	100	96.972	Anas_platyrhynchos
ENSMOCG00000015463	Pum1	100	95.885	ENSACAG00000000682	PUM1	98	95.202	Anolis_carolinensis
ENSMOCG00000015463	Pum1	100	98.738	ENSANAG00000027865	PUM1	100	98.738	Aotus_nancymaae
ENSMOCG00000015463	Pum1	90	77.983	ENSACLG00000019354	pum1	100	78.168	Astatotilapia_calliptera
ENSMOCG00000015463	Pum1	100	83.727	ENSAMXG00000020607	pum1	96	78.930	Astyanax_mexicanus
ENSMOCG00000015463	Pum1	100	98.810	ENSBTAG00000018979	PUM1	100	99.034	Bos_taurus
ENSMOCG00000015463	Pum1	100	98.907	ENSCJAG00000006035	PUM1	100	98.907	Callithrix_jacchus
ENSMOCG00000015463	Pum1	100	98.611	ENSCAFG00000011205	PUM1	100	96.552	Canis_familiaris
ENSMOCG00000015463	Pum1	92	96.815	ENSCAFG00020024616	PUM1	99	98.197	Canis_lupus_dingo
ENSMOCG00000015463	Pum1	100	98.654	ENSCHIG00000012952	PUM1	100	98.654	Capra_hircus
ENSMOCG00000015463	Pum1	100	98.654	ENSTSYG00000008868	PUM1	100	98.654	Carlito_syrichta
ENSMOCG00000015463	Pum1	100	98.823	ENSCPOG00000031613	PUM1	100	98.823	Cavia_porcellus
ENSMOCG00000015463	Pum1	100	98.901	ENSCATG00000017991	PUM1	100	99.275	Cercocebus_atys
ENSMOCG00000015463	Pum1	100	98.907	ENSCLAG00000007662	PUM1	100	99.275	Chinchilla_lanigera
ENSMOCG00000015463	Pum1	100	98.611	ENSCSAG00000001028	PUM1	100	98.083	Chlorocebus_sabaeus
ENSMOCG00000015463	Pum1	92	98.611	ENSCHOG00000010245	PUM1	93	95.546	Choloepus_hoffmanni
ENSMOCG00000015463	Pum1	100	96.978	ENSCPBG00000009288	PUM1	100	97.343	Chrysemys_picta_bellii
ENSMOCG00000015463	Pum1	100	98.907	ENSCANG00000042606	PUM1	100	98.792	Colobus_angolensis_palliatus
ENSMOCG00000015463	Pum1	100	99.542	ENSCGRG00001024949	Pum1	100	99.542	Cricetulus_griseus_chok1gshd
ENSMOCG00000015463	Pum1	100	99.542	ENSCGRG00000014197	Pum1	100	99.542	Cricetulus_griseus_crigri
ENSMOCG00000015463	Pum1	90	76.111	ENSCSEG00000015981	pum1	100	77.407	Cynoglossus_semilaevis
ENSMOCG00000015463	Pum1	100	82.447	ENSCVAG00000007043	pum1	100	74.959	Cyprinodon_variegatus
ENSMOCG00000015463	Pum1	100	84.845	ENSDARG00000099256	pum1	100	79.599	Danio_rerio
ENSMOCG00000015463	Pum1	100	98.611	ENSDNOG00000010939	PUM1	100	98.402	Dasypus_novemcinctus
ENSMOCG00000015463	Pum1	85	99.275	ENSDORG00000001875	Pum1	100	99.275	Dipodomys_ordii
ENSMOCG00000015463	Pum1	85	100.000	ENSETEG00000004355	PUM1	87	93.171	Echinops_telfairi
ENSMOCG00000015463	Pum1	100	98.611	ENSEASG00005010813	PUM1	100	98.486	Equus_asinus_asinus
ENSMOCG00000015463	Pum1	100	98.486	ENSECAG00000021369	PUM1	100	98.486	Equus_caballus
ENSMOCG00000015463	Pum1	80	98.611	ENSEEUG00000003871	PUM1	74	99.322	Erinaceus_europaeus
ENSMOCG00000015463	Pum1	100	83.088	ENSELUG00000002409	pum1	100	83.395	Esox_lucius
ENSMOCG00000015463	Pum1	100	98.991	ENSFCAG00000010374	PUM1	100	99.167	Felis_catus
ENSMOCG00000015463	Pum1	100	96.044	ENSFALG00000001214	PUM1	97	94.221	Ficedula_albicollis
ENSMOCG00000015463	Pum1	100	98.823	ENSFDAG00000011319	PUM1	100	98.823	Fukomys_damarensis
ENSMOCG00000015463	Pum1	70	88.403	ENSGMOG00000010491	pum1	100	74.566	Gadus_morhua
ENSMOCG00000015463	Pum1	100	97.264	ENSGALG00000042598	PUM1	99	98.178	Gallus_gallus
ENSMOCG00000015463	Pum1	100	80.693	ENSGAFG00000015617	pum1	100	89.880	Gambusia_affinis
ENSMOCG00000015463	Pum1	100	82.534	ENSGACG00000005717	pum1	100	75.680	Gasterosteus_aculeatus
ENSMOCG00000015463	Pum1	100	96.766	ENSGAGG00000001290	PUM1	99	97.976	Gopherus_agassizii
ENSMOCG00000015463	Pum1	100	98.907	ENSGGOG00000011983	PUM1	100	98.901	Gorilla_gorilla
ENSMOCG00000015463	Pum1	100	82.818	ENSHBUG00000018718	pum1	100	75.620	Haplochromis_burtoni
ENSMOCG00000015463	Pum1	100	98.738	ENSHGLG00000013819	Pum1	100	98.738	Heterocephalus_glaber_female
ENSMOCG00000015463	Pum1	100	98.738	ENSHGLG00100008621	Pum1	100	98.738	Heterocephalus_glaber_male
ENSMOCG00000015463	Pum1	100	82.491	ENSIPUG00000020421	pum1	100	77.889	Ictalurus_punctatus
ENSMOCG00000015463	Pum1	100	99.176	ENSSTOG00000010757	PUM1	100	99.176	Ictidomys_tridecemlineatus
ENSMOCG00000015463	Pum1	100	98.907	ENSJJAG00000000530	Pum1	100	98.907	Jaculus_jaculus
ENSMOCG00000015463	Pum1	100	82.200	ENSKMAG00000003481	pum1	100	75.207	Kryptolebias_marmoratus
ENSMOCG00000015463	Pum1	100	81.807	ENSLBEG00000002527	pum1	100	75.745	Labrus_bergylta
ENSMOCG00000015463	Pum1	100	88.228	ENSLACG00000017188	PUM1	99	86.178	Latimeria_chalumnae
ENSMOCG00000015463	Pum1	100	91.418	ENSLOCG00000005210	pum1	99	88.230	Lepisosteus_oculatus
ENSMOCG00000015463	Pum1	100	98.150	ENSLAFG00000003178	PUM1	100	98.150	Loxodonta_africana
ENSMOCG00000015463	Pum1	100	98.901	ENSMFAG00000010291	PUM1	100	99.275	Macaca_fascicularis
ENSMOCG00000015463	Pum1	100	98.901	ENSMMUG00000013520	PUM1	100	98.901	Macaca_mulatta
ENSMOCG00000015463	Pum1	100	98.907	ENSMNEG00000034639	PUM1	100	98.907	Macaca_nemestrina
ENSMOCG00000015463	Pum1	100	98.907	ENSMLEG00000038743	PUM1	100	98.792	Mandrillus_leucophaeus
ENSMOCG00000015463	Pum1	100	82.818	ENSMAMG00000011606	pum1	100	75.702	Mastacembelus_armatus
ENSMOCG00000015463	Pum1	100	82.818	ENSMZEG00005005834	pum1	100	75.620	Maylandia_zebra
ENSMOCG00000015463	Pum1	100	96.891	ENSMGAG00000000724	PUM1	100	96.888	Meleagris_gallopavo
ENSMOCG00000015463	Pum1	100	99.633	ENSMAUG00000022090	Pum1	100	99.633	Mesocricetus_auratus
ENSMOCG00000015463	Pum1	99	96.630	ENSMICG00000012213	-	99	96.630	Microcebus_murinus
ENSMOCG00000015463	Pum1	100	98.823	ENSMICG00000007713	-	100	98.823	Microcebus_murinus
ENSMOCG00000015463	Pum1	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSMOCG00000015463	Pum1	100	97.065	ENSMODG00000017067	PUM1	100	97.061	Monodelphis_domestica
ENSMOCG00000015463	Pum1	90	88.276	ENSMALG00000016399	pum1	100	90.843	Monopterus_albus
ENSMOCG00000015463	Pum1	100	99.075	MGP_CAROLIEiJ_G0026549	Pum1	100	99.075	Mus_caroli
ENSMOCG00000015463	Pum1	100	99.327	ENSMUSG00000028580	Pum1	100	99.327	Mus_musculus
ENSMOCG00000015463	Pum1	100	99.306	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSMOCG00000015463	Pum1	100	99.306	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSMOCG00000015463	Pum1	100	98.611	ENSMPUG00000015454	PUM1	100	98.402	Mustela_putorius_furo
ENSMOCG00000015463	Pum1	100	98.611	ENSMLUG00000006490	PUM1	100	98.402	Myotis_lucifugus
ENSMOCG00000015463	Pum1	100	99.075	ENSNGAG00000002378	Pum1	100	99.075	Nannospalax_galili
ENSMOCG00000015463	Pum1	100	79.937	ENSNBRG00000010689	pum1	100	83.313	Neolamprologus_brichardi
ENSMOCG00000015463	Pum1	100	97.917	ENSNLEG00000001151	PUM1	100	97.917	Nomascus_leucogenys
ENSMOCG00000015463	Pum1	84	96.959	ENSMEUG00000000976	-	82	96.959	Notamacropus_eugenii
ENSMOCG00000015463	Pum1	84	99.609	ENSOPRG00000001776	PUM1	73	99.609	Ochotona_princeps
ENSMOCG00000015463	Pum1	100	98.823	ENSODEG00000003465	PUM1	100	98.823	Octodon_degus
ENSMOCG00000015463	Pum1	100	83.354	ENSONIG00000002290	pum1	100	75.950	Oreochromis_niloticus
ENSMOCG00000015463	Pum1	81	77.357	ENSOANG00000004902	-	100	76.915	Ornithorhynchus_anatinus
ENSMOCG00000015463	Pum1	100	98.611	ENSOCUG00000008641	PUM1	99	98.486	Oryctolagus_cuniculus
ENSMOCG00000015463	Pum1	100	83.684	ENSORLG00000011482	pum1	100	75.947	Oryzias_latipes
ENSMOCG00000015463	Pum1	100	83.684	ENSORLG00020019461	pum1	100	75.947	Oryzias_latipes_hni
ENSMOCG00000015463	Pum1	100	83.807	ENSORLG00015011375	pum1	100	76.030	Oryzias_latipes_hsok
ENSMOCG00000015463	Pum1	90	92.530	ENSOMEG00000009312	pum1	100	76.834	Oryzias_melastigma
ENSMOCG00000015463	Pum1	100	97.917	ENSOGAG00000011063	PUM1	100	95.550	Otolemur_garnettii
ENSMOCG00000015463	Pum1	100	98.611	ENSOARG00000001899	PUM1	100	98.551	Ovis_aries
ENSMOCG00000015463	Pum1	100	98.907	ENSPPAG00000044003	PUM1	100	98.901	Pan_paniscus
ENSMOCG00000015463	Pum1	100	98.907	ENSPPRG00000001370	PUM1	100	98.729	Panthera_pardus
ENSMOCG00000015463	Pum1	100	98.738	ENSPTIG00000010798	PUM1	100	98.611	Panthera_tigris_altaica
ENSMOCG00000015463	Pum1	100	98.907	ENSPTRG00000000453	PUM1	100	98.901	Pan_troglodytes
ENSMOCG00000015463	Pum1	100	98.907	ENSPANG00000016338	PUM1	100	99.275	Papio_anubis
ENSMOCG00000015463	Pum1	100	82.353	ENSPKIG00000010578	pum1	100	78.081	Paramormyrops_kingsleyae
ENSMOCG00000015463	Pum1	100	97.272	ENSPSIG00000014118	PUM1	100	97.140	Pelodiscus_sinensis
ENSMOCG00000015463	Pum1	100	78.297	ENSPMGG00000005836	pum1	100	81.763	Periophthalmus_magnuspinnatus
ENSMOCG00000015463	Pum1	100	99.663	ENSPEMG00000010009	Pum1	100	99.663	Peromyscus_maniculatus_bairdii
ENSMOCG00000015463	Pum1	100	97.229	ENSPCIG00000014151	PUM1	100	97.343	Phascolarctos_cinereus
ENSMOCG00000015463	Pum1	93	83.477	ENSPFOG00000007289	pum1	99	82.083	Poecilia_formosa
ENSMOCG00000015463	Pum1	100	82.571	ENSPLAG00000007256	pum1	100	77.927	Poecilia_latipinna
ENSMOCG00000015463	Pum1	85	82.695	ENSPMEG00000019543	pum1	99	78.105	Poecilia_mexicana
ENSMOCG00000015463	Pum1	100	82.571	ENSPREG00000005195	pum1	100	80.704	Poecilia_reticulata
ENSMOCG00000015463	Pum1	100	98.611	ENSPPYG00000001621	PUM1	100	96.950	Pongo_abelii
ENSMOCG00000015463	Pum1	84	98.457	ENSPCAG00000001979	PUM1	74	98.457	Procavia_capensis
ENSMOCG00000015463	Pum1	100	98.823	ENSPCOG00000004398	PUM1	100	98.823	Propithecus_coquereli
ENSMOCG00000015463	Pum1	100	98.611	ENSPVAG00000005207	PUM1	97	96.552	Pteropus_vampyrus
ENSMOCG00000015463	Pum1	100	82.818	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSMOCG00000015463	Pum1	100	84.472	ENSPNAG00000026728	pum1	100	80.376	Pygocentrus_nattereri
ENSMOCG00000015463	Pum1	100	99.306	ENSRNOG00000011709	Pum1	100	99.075	Rattus_norvegicus
ENSMOCG00000015463	Pum1	100	98.907	ENSRBIG00000042521	PUM1	100	99.275	Rhinopithecus_bieti
ENSMOCG00000015463	Pum1	100	98.907	ENSRROG00000020156	PUM1	100	98.792	Rhinopithecus_roxellana
ENSMOCG00000015463	Pum1	100	98.991	ENSSBOG00000032037	PUM1	100	98.991	Saimiri_boliviensis_boliviensis
ENSMOCG00000015463	Pum1	100	97.061	ENSSHAG00000010918	PUM1	100	97.061	Sarcophilus_harrisii
ENSMOCG00000015463	Pum1	100	82.571	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSMOCG00000015463	Pum1	100	82.942	ENSSDUG00000009021	pum1	100	76.529	Seriola_dumerili
ENSMOCG00000015463	Pum1	100	82.942	ENSSLDG00000009667	pum1	100	78.549	Seriola_lalandi_dorsalis
ENSMOCG00000015463	Pum1	99	98.611	ENSSARG00000003055	PUM1	91	99.115	Sorex_araneus
ENSMOCG00000015463	Pum1	100	97.011	ENSSPUG00000006267	PUM1	100	96.384	Sphenodon_punctatus
ENSMOCG00000015463	Pum1	100	83.066	ENSSPAG00000016636	pum1	100	77.413	Stegastes_partitus
ENSMOCG00000015463	Pum1	100	99.075	ENSSSCG00000003591	PUM1	100	99.167	Sus_scrofa
ENSMOCG00000015463	Pum1	100	82.447	ENSTRUG00000013121	pum1	100	82.942	Takifugu_rubripes
ENSMOCG00000015463	Pum1	100	80.717	ENSTNIG00000016983	pum1	99	76.515	Tetraodon_nigroviridis
ENSMOCG00000015463	Pum1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSMOCG00000015463	Pum1	92	98.724	ENSTTRG00000007436	PUM1	90	98.724	Tursiops_truncatus
ENSMOCG00000015463	Pum1	99	98.341	ENSUAMG00000018262	-	100	98.341	Ursus_americanus
ENSMOCG00000015463	Pum1	95	99.034	ENSUMAG00000009211	PUM1	100	99.034	Ursus_maritimus
ENSMOCG00000015463	Pum1	100	98.506	ENSVPAG00000005902	PUM1	92	98.983	Vicugna_pacos
ENSMOCG00000015463	Pum1	100	98.823	ENSVVUG00000014631	PUM1	100	99.034	Vulpes_vulpes
ENSMOCG00000015463	Pum1	100	88.323	ENSXETG00000012904	pum1	99	86.482	Xenopus_tropicalis
ENSMOCG00000015463	Pum1	100	80.693	ENSXMAG00000002945	pum1	100	76.995	Xiphophorus_maculatus